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Conserved domains on  [gi|326370483|gb|ADZ56293|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Tuarega ouarzazatensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.49e-41

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 131.82  E-value: 3.49e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   3 TLSMSFMISFLVPMLVMLIATTLSKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 326370483  83 SSNLMIWSSATLFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.49e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 131.82  E-value: 3.49e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   3 TLSMSFMISFLVPMLVMLIATTLSKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 326370483  83 SSNLMIWSSATLFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.61e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 91.72  E-value: 1.61e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   19 MLIATTLSKKIINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWSSAtLFFIM 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGFVEM-LIFIA 78

                          90
                  ....*....|....*.
gi 326370483   99 VLLGGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-115 1.09e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.48  E-value: 1.09e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   1 MMTLSMSFMISFLVPMLVMLIATTLSKKI---INDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPI 77
Cdd:COG0838    1 MLSDYLPILIFLLVALGLALAMLLLSRLLgpkRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPW 80

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 326370483  78 VIIMKSSNLMIWSSAtLFFIMVLLGGLYHEWNQGALQW 115
Cdd:COG0838   81 AVVFRELGWFGLIEM-LVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.49e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 131.82  E-value: 3.49e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   3 TLSMSFMISFLVPMLVMLIATTLSKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 326370483  83 SSNLMIWSSATLFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 6.58e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 131.52  E-value: 6.58e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   1 MMTLSMSFMISFLVPMLVMLIATTLSKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 326370483  81 MKSSNLMIWSSATLFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-117 2.81e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 124.72  E-value: 2.81e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   1 MMTLSMSFMISFLVPMLVMLIATTLSKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 326370483  81 MKSSNLMIWSSATLFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 2.05e-33

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 112.64  E-value: 2.05e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   1 MMTLSMSFMISFLVPMLVMLIATTLSKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 326370483  81 MKSSNLMIWSSATLFFIMVLLGGLYHEWNQGALQWA 116
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-117 1.13e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 105.41  E-value: 1.13e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   2 MTLSMSFMISFLVPMLVMLIATTLSKKIINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIM 81
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 326370483  82 KSSNLMIWSSATLFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 16-117 9.61e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 98.07  E-value: 9.61e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483  16 MLVMLIATTLS----------KKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPI---VIIMK 82
Cdd:MTH00136   5 TTILTITIALSlilaivsfwlPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLpwgDQLPS 84

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 326370483  83 SSNLMIWSSATLffiMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00136  85 PLLTFFWATAVL---ILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-116 2.28e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 96.87  E-value: 2.28e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   1 MMTLSMsFMISFLVPMLVMLIATTLSKkIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00113   1 MNLISM-LTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 78

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 326370483  81 MKSSNLMIWSSATLFFIMVLLGGLYHEWNQGALQWA 116
Cdd:MTH00113  79 INLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 2.56e-27

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 96.97  E-value: 2.56e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   1 MMTLSMSFMISFLVPMLVMLIATTLSKKIInDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 326370483  81 MKSSNLMIWSSATLFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 16-117 1.36e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 95.06  E-value: 1.36e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483  16 MLVMLIATTLSKKIIN----------DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPI---VIIMK 82
Cdd:MTH00069   3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNT 82

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 326370483  83 SSNLMIWSSATLffiMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00069  83 PTNTLFWSTLIL---ILLTLGLIYEWIQGGLEWAE 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.61e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 91.72  E-value: 1.61e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   19 MLIATTLSKKIINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWSSAtLFFIM 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGFVEM-LIFIA 78

                          90
                  ....*....|....*.
gi 326370483   99 VLLGGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 3.91e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 91.11  E-value: 3.91e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   1 MMTLSMSFMISFLVPMLVMLIATTLSKKIInDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNP-DGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 326370483  81 MKSSNLMIWSsaTLFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00203  80 NQLSSLSLLL--AFLFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-115 1.09e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.48  E-value: 1.09e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   1 MMTLSMSFMISFLVPMLVMLIATTLSKKI---INDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPI 77
Cdd:COG0838    1 MLSDYLPILIFLLVALGLALAMLLLSRLLgpkRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPW 80

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 326370483  78 VIIMKSSNLMIWSSAtLFFIMVLLGGLYHEWNQGALQW 115
Cdd:COG0838   81 AVVFRELGWFGLIEM-LVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 2.42e-21

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 81.83  E-value: 2.42e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   8 FMISFLVPMLVMLIATTLSKKIiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILP-IVIIMKSSNL 86
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWL 93

                         90       100       110
                 ....*....|....*....|....*....|
gi 326370483  87 MIWSSatLFFIMVLLGGLYHEWNQGALQWA 116
Cdd:PRK06602  94 GFVEA--MIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-115 3.95e-17

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 70.86  E-value: 3.95e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   8 FMISFLVPMLVMLIATTLSKKIiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLM 87
Cdd:MTH00018   7 LIFSVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPF 85

                         90       100
                 ....*....|....*....|....*...
gi 326370483  88 IWSSATLFFIMVLLGGLYhEWNQGALQW 115
Cdd:MTH00018  86 GFWTMVGFLFILTLGLIY-EWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.52e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 69.35  E-value: 1.52e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWSSATLFFIMVLLGGLYhEWNQG 111
Cdd:MTH00055  35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLIILTIGLIY-EWVKG 113


                 ....
gi 326370483 112 ALQW 115
Cdd:MTH00055 114 GLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-115 3.31e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 66.11  E-value: 3.31e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   3 TLSMSFMISFLVPMLVMLIATTLSKKIIN----DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIV 78
Cdd:MTH00030   7 TIFFSTLLGVGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWS 86

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 326370483  79 IIMKSSNLM-IWSSATlfFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00030  87 IVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 3.77e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 47.74  E-value: 3.77e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483  32 DREKSSPFECGFDPKSSARMP--FSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWSSATLFFIMVLLGGLYhEWN 109
Cdd:PRK07928  34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFMLTVFVAYAY-VWR 112


                 ....*.
gi 326370483 110 QGALQW 115
Cdd:PRK07928 113 RGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
8-115 5.89e-08

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 47.35  E-value: 5.89e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   8 FMISFLVPMLVMLIATTLSKKIIN---DREKSSPFECGFDP-KSSARMpfSLRFFLIAVIFLIFDIEIALILPIVIIMKS 83
Cdd:PRK08489  17 LVLTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKL 94

                         90       100       110
                 ....*....|....*....|....*....|..
gi 326370483  84 SNLMIWSSATLFFIMVLLGGLYhEWNQGALQW 115
Cdd:PRK08489  95 LGLFGLIEMLLFIVLLTIGFIY-AWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 7.38e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 47.04  E-value: 7.38e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWSSATLFFIMVLLGGLYhEWNQG 111
Cdd:PRK07756  39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIEMLIFVVMLLVGLAY-AWKKK 117


                 ....
gi 326370483 112 ALQW 115
Cdd:PRK07756 118 VLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 9.23e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 44.11  E-value: 9.23e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483   1 MMTLSMSFMISFLVPMLVMLIATTLSKKIiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVII 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 326370483  81 MKSSNLMIWssatlFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00092  80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 26-115 6.10e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.41  E-value: 6.10e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483  26 SKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWssaTLFFIMVLLGGLY 105
Cdd:MTH00060  28 NKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFYNFWY---YYFFLLLLFLGFV 104

                         90
                 ....*....|
gi 326370483 106 HEWNQGALQW 115
Cdd:MTH00060 105 VELFSGYVRW 114
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 8.97e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 36.71  E-value: 8.97e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370483  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIVIIMKSSNLMIWSSATLFFIMVLLgGLYHEWNQG 111
Cdd:PRK06432  60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFIETLIFLAMPLF-AVYYAFKMG 138


                 ....
gi 326370483 112 ALQW 115
Cdd:PRK06432 139 YMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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