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Conserved domains on  [gi|326370503|gb|ADZ56312|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Mekongiella kingdoni]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-310 2.41e-141

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 401.07  E-value: 2.41e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00193  15 VLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00193  95 FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYI 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFYSMIF 258
Cdd:MTH00193 175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLF 254

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 326370503 259 FIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00193 255 YLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-310 2.41e-141

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 401.07  E-value: 2.41e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00193  15 VLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00193  95 FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYI 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFYSMIF 258
Cdd:MTH00193 175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLF 254

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 326370503 259 FIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00193 255 YLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
19-302 7.96e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 285.52  E-value: 7.96e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503   19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFG 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503   99 TYM--CSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQL 176
Cdd:pfam00146  89 PGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  177 YCWFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGG----- 251
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 326370503  252 -DFYSMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIF 302
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 19-314 3.68e-87

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 264.30  E-value: 3.68e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:COG1005   22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMC--SFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQ- 175
Cdd:COG1005  102 PGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQa 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 176 LYCWFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGG---- 251
Cdd:COG1005  182 GGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlgp 261

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 326370503 252 ---DFYSMI-----FFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLnfliffcgLSILLTLII 314
Cdd:COG1005  262 fpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL--------VNLVLTAAV 324
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-310 2.41e-141

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 401.07  E-value: 2.41e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00193  15 VLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00193  95 FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYI 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFYSMIF 258
Cdd:MTH00193 175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLF 254

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 326370503 259 FIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00193 255 YLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 19-308 5.72e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 349.33  E-value: 5.72e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00225  14 LLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSM 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00225  94 FSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYF 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFYSMIF 258
Cdd:MTH00225 174 WFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVTIDL 253

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 326370503 259 F--IKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00225 254 FliLKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 19-307 7.47e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 326.44  E-value: 7.47e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00143  14 VLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSY 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00143  94 FSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSV 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDF----- 253
Cdd:MTH00143 174 WLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSvlfll 253

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 326370503 254 YSMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLS 307
Cdd:MTH00143 254 GGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 19-311 1.38e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 302.98  E-value: 1.38e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00218  15 VLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLP 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00218  95 FSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETI 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFYSMIF 258
Cdd:MTH00218 175 WLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTINL 254

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 326370503 259 FIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILLT 311
Cdd:MTH00218 255 MLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFA 307
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 19-310 2.32e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 292.03  E-value: 2.32e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00195  15 VLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSP 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00195  95 FGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFS 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDfYSMIF 258
Cdd:MTH00195 175 WVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG-GTIIV 253

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 326370503 259 FIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00195 254 ALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 19-313 1.69e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 290.37  E-value: 1.69e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00071  18 VLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00071  98 NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFM 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFY---- 254
Cdd:MTH00071 178 WLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNhlqp 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 326370503 255 ---SMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILLTLI 313
Cdd:MTH00071 258 elsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 19-313 5.37e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 288.83  E-value: 5.37e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00104  13 ILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMP 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00104  93 YPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGG------- 251
Cdd:MTH00104 173 WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAfhnpymp 252

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 326370503 252 DFYSMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILLTLI 313
Cdd:MTH00104 253 ELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 19-308 6.19e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 289.10  E-value: 6.19e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00111  18 ILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00111  98 FPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPL 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFF-------GG 251
Cdd:MTH00111 178 WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLnpstlnlPP 257

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 326370503 252 DFYSMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00111 258 ELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
NADHdh pfam00146
NADH dehydrogenase;
19-302 7.96e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 285.52  E-value: 7.96e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503   19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFG 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503   99 TYM--CSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQL 176
Cdd:pfam00146  89 PGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  177 YCWFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGG----- 251
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 326370503  252 -DFYSMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIF 302
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 19-310 1.11e-95

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 285.72  E-value: 1.11e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00040  17 VLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVP 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00040  97 TPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGS 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFYSMIF 258
Cdd:MTH00040 177 WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGSPFNEI 256

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 259 F--------IKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00040 257 FpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 19-311 1.64e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 275.33  E-value: 1.64e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00134  19 VLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYC 178
Cdd:MTH00134  99 YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESI 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 WFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFY---- 254
Cdd:MTH00134 179 WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIptlp 258

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 255 ---SMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILLT 311
Cdd:MTH00134 259 eltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFA 318
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 19-314 3.68e-87

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 264.30  E-value: 3.68e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:COG1005   22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMC--SFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQ- 175
Cdd:COG1005  102 PGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQa 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 176 LYCWFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGG---- 251
Cdd:COG1005  182 GGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlgp 261

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 326370503 252 ---DFYSMI-----FFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLnfliffcgLSILLTLII 314
Cdd:COG1005  262 fpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL--------VNLVLTAAV 324
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 20-311 4.42e-87

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 263.56  E-value: 4.42e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  20 LIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYLT 99
Cdd:MTH00010  17 LLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKH 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 100 YMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQlYCW 179
Cdd:MTH00010  97 PSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ-YSW 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 180 FMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFG----GDFYS 255
Cdd:MTH00010 176 ILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfipsIFISD 255

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 326370503 256 MIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSILLT 311
Cdd:MTH00010 256 LMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 19-308 2.46e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 261.97  E-value: 2.46e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00054  15 LLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYG 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 T--YMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQL 176
Cdd:MTH00054  95 EgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQK 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 177 YCWFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFYSM 256
Cdd:MTH00054 175 NIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVIS 254

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 326370503 257 I----------FFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00054 255 GptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 19-306 1.15e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 250.04  E-value: 1.15e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00216  19 LLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYE 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 --TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQL 176
Cdd:MTH00216  99 rgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQN 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 177 -YCWFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGG---- 251
Cdd:MTH00216 179 nGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGwlsp 258

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 326370503 252 ----DFYSMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGL 306
Cdd:MTH00216 259 ikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
19-297 1.51e-80

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 247.03  E-value: 1.51e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:PRK06076  23 VLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFG 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 -TYMCSFM-YGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQL 176
Cdd:PRK06076 103 pELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQF 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 177 YCWFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGG----- 251
Cdd:PRK06076 183 LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGwlppf 262

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 326370503 252 -----DFYSMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSL 297
Cdd:PRK06076 263 plgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 19-308 2.84e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 213.73  E-value: 2.84e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00029  20 LLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMD 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 --TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQL 176
Cdd:MTH00029 100 qgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQR 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 177 YCWFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGG----- 251
Cdd:MTH00029 180 SVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGwlspl 259

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 326370503 252 ------------------DFYSMIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00029 260 dgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 19-308 5.92e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 200.90  E-value: 5.92e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00090   9 ILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYF 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  99 TYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQLYc 178
Cdd:MTH00090  89 FDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSFSLSLF- 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 179 wFMIICFPLMIscfascLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGgdfYSMIF 258
Cdd:MTH00090 168 -VIYLPFLIMI------IAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK---FSFLM 237

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 326370503 259 FiklTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00090 238 L---FLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 19-303 1.83e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 166.25  E-value: 1.83e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIfsLMISLVVWSVFPY- 97
Cdd:MTH00058  14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVF--LLVLLVVFYCFIYg 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  98 LTYMCSFM-YGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMnyqL 176
Cdd:MTH00058  92 SYYSGSYSsLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFY---Y 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 177 YCWFMIICFPLMISCFASC-LAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFFGGDFYS 255
Cdd:MTH00058 169 SGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVS 248

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 326370503 256 MIFFIKLTFisfcFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFF 303
Cdd:MTH00058 249 IMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 19-297 1.97e-25

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 104.26  E-value: 1.97e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVAFLTLFERSVLGYIHIRKGPNKVGFIGILQPFSDALKLLTKEQFVLISSNYLLYYFSPIFSLMISLVVWSVFP-- 96
Cdd:CHL00032  40 ITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPfg 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  97 YLTYMCSFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMNYQ- 175
Cdd:CHL00032 120 YHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQs 199

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 176 ------LYCWFMIICFplmISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFF 249
Cdd:CHL00032 200 kygfwgWNLWRQPIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYL 276

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 326370503 250 GG-----------DFYSM--------------IFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSL 297
Cdd:CHL00032 277 GGwnlsipyifipELFEInktggvfgttigifITLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-303 1.68e-24

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 100.64  E-value: 1.68e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  19 VLIAVA---FLTLFERSVLGYIHIRKGPnkvgfiGILQPFSDALKLLTKEqfVLISSNY-LLYYFSPIFSLMISLVVWSV 94
Cdd:COG0650   11 LLLALLlapLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKE--TVVPETAsWLFRAAPYVALAAMLLAALL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503  95 FPYLTYMC--SFMYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFM 172
Cdd:COG0650   83 VPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIV 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 173 NYQL---YCWFMIICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMGLFFF 249
Cdd:COG0650  163 AYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFL 242

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370503 250 GGDFYS------MIFFIKLTFISFCFIWVRGTLPRFRYDKLMYMAWKSFLPLSLNFLIFF 303
Cdd:COG0650  243 PWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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