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Conserved domains on  [gi|344031524|gb|AEM77390|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Drosophila curveaedeagus (nomen nudum)]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 9.48e-154

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 432.27  E-value: 9.48e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   3 FVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFS 82
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  83 LFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIG 162
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 163 SYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344031524 243 CVIFLGCDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILL 308
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 9.48e-154

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 432.27  E-value: 9.48e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   3 FVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFS 82
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  83 LFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIG 162
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 163 SYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344031524 243 CVIFLGCDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILL 308
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
11-300 1.64e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 289.76  E-value: 1.64e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   11 LLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   91 MCMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIY 168
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  169 FFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFCVIFLG 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 344031524  249 ------CDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLF 300
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-308 3.61e-92

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 277.01  E-value: 3.61e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   1 MEFVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPI 80
Cdd:COG1005    6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  81 FSLFLSLFVWMCMPFF--VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFI 158
Cdd:COG1005   86 LAFIPALLAFAVIPFGpgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 159 FLIGSYNMIYFFHYQV-YMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILF 237
Cdd:COG1005  166 LLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 238 MSMLFCVIFLG-------CDVFN-----LLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFK 305
Cdd:COG1005  246 VSALATTLFLGgwlgpfpILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVV 325


                 ...
gi 344031524 306 ILL 308
Cdd:COG1005  326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 9.48e-154

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 432.27  E-value: 9.48e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   3 FVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFS 82
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  83 LFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIG 162
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 163 SYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344031524 243 CVIFLGCDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILL 308
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 4-306 3.02e-135

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 385.54  E-value: 3.02e-135
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   4 VLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSL 83
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  84 FLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIGS 163
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 164 YNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFC 243
Cdd:MTH00225 161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 344031524 244 VIFLGC--DVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKI 306
Cdd:MTH00225 241 ILFFGGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 4-304 7.13e-124

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 356.87  E-value: 7.13e-124
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   4 VLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSL 83
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  84 FLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIGS 163
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 164 YNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFC 243
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344031524 244 VIFLGCDVF-----NLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGF 304
Cdd:MTH00143 241 VLFFGGSSVlfllgGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-311 5.94e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 331.97  E-value: 5.94e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   1 MEFVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPI 80
Cdd:MTH00071   2 MTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  81 FSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFL 160
Cdd:MTH00071  82 MALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 161 IGSYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSM 240
Cdd:MTH00071 162 TGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNT 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344031524 241 LFCVIFLGC-------DVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILLFSL 311
Cdd:MTH00071 242 LSTILFLGStynhlqpELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-311 6.27e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 329.55  E-value: 6.27e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   1 MEFVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPI 80
Cdd:MTH00111   2 PTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  81 FSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFL 160
Cdd:MTH00111  82 LALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 161 IGSYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSM 240
Cdd:MTH00111 162 SGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344031524 241 LFCVIFL-------GCDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILLFSL 311
Cdd:MTH00111 242 LTTILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGL 319
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 3-311 1.38e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 320.70  E-value: 1.38e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   3 FVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFS 82
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  83 LFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIG 162
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 163 SYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 344031524 243 CVIFLGCDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILLFSL 311
Cdd:MTH00218 241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 4-308 2.70e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 319.77  E-value: 2.70e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   4 VLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSL 83
Cdd:MTH00195   2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  84 FLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIGS 163
Cdd:MTH00195  82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 164 YNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFC 243
Cdd:MTH00195 162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 344031524 244 VIFLGCDVfNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILL 308
Cdd:MTH00195 242 ILFLGGGG-TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-311 6.14e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 319.26  E-value: 6.14e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   7 LIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLS 86
Cdd:MTH00104   3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  87 LFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNM 166
Cdd:MTH00104  83 LTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTL 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 167 IYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFCVIF 246
Cdd:MTH00104 163 STLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILF 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 344031524 247 LGC-------DVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILLFSL 311
Cdd:MTH00104 243 LGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 3-311 1.43e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 308.46  E-value: 1.43e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   3 FVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFS 82
Cdd:MTH00134   5 LITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  83 LFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIG 162
Cdd:MTH00134  85 LTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTG 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 163 SYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00134 165 GFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344031524 243 CVIFLGCDVFNLL-------FYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILLFSL 311
Cdd:MTH00134 245 AILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 3-308 4.26e-103

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 304.01  E-value: 4.26e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   3 FVLSLIGSLLLVicvLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFS 82
Cdd:MTH00010   5 FFISILLSYVMA---LLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMS 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  83 LFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIG 162
Cdd:MTH00010  82 LILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQ 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 163 SYNMIYFFHYQvYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00010 162 TFSFSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFT 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 243 CVIFLGCD----VFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILL 308
Cdd:MTH00010 241 SVFFTSFIpsifISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-312 2.39e-102

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 302.67  E-value: 2.39e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   1 MEFVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPI 80
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  81 FSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFL 160
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 161 IGSYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSM 240
Cdd:MTH00040 161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 241 LFCVIFLGCDV-FNLLFYV-------KLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKILLFSLL 312
Cdd:MTH00040 241 LSVILFLGGGSpFNEIFPIniiivgiKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILP 320
NADHdh pfam00146
NADH dehydrogenase;
11-300 1.64e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 289.76  E-value: 1.64e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   11 LLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   91 MCMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIY 168
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  169 FFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFCVIFLG 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 344031524  249 ------CDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLF 300
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-308 3.61e-92

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 277.01  E-value: 3.61e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   1 MEFVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPI 80
Cdd:COG1005    6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  81 FSLFLSLFVWMCMPFF--VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFI 158
Cdd:COG1005   86 LAFIPALLAFAVIPFGpgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 159 FLIGSYNMIYFFHYQV-YMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILF 237
Cdd:COG1005  166 LLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 238 MSMLFCVIFLG-------CDVFN-----LLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFK 305
Cdd:COG1005  246 VSALATTLFLGgwlgpfpILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVV 325


                 ...
gi 344031524 306 ILL 308
Cdd:COG1005  326 LLF 328
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
3-295 6.50e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 260.89  E-value: 6.50e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   3 FVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFS 82
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  83 LFLSLFVWMCMPFF--VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFL 160
Cdd:PRK06076  89 FIPAFLAWAVIPFGpeLVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 161 IGSYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSM 240
Cdd:PRK06076 169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 344031524 241 LFCVIFLG----------CDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSL 295
Cdd:PRK06076 249 LITTLFLGgwlppfplggGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 7-307 1.07e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 260.43  E-value: 1.07e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   7 LIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLS 86
Cdd:MTH00054   5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  87 LFVWMCMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIGSY 164
Cdd:MTH00054  85 FIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 165 NMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFCV 244
Cdd:MTH00054 165 NLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 344031524 245 IFLGCDVF----------NLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLF----FIGFKIL 307
Cdd:MTH00054 245 LFLGGWLVisgptsyfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLvsgiLIGFNAL 321
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-300 1.02e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 257.74  E-value: 1.02e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   2 EFVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIF 81
Cdd:MTH00216   4 FIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  82 SLFLSLFVWMCMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIF 159
Cdd:MTH00216  84 SFTLALIVWGVIPYerGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 160 LIGSYNMIYFFHYQV-YMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFM 238
Cdd:MTH00216 164 CVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILM 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 239 SMLFCVIFLG--------CDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLF 300
Cdd:MTH00216 244 SCLTTILFLGgwlspikyFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-306 5.73e-71

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 223.36  E-value: 5.73e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   3 FVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFS 82
Cdd:MTH00029   6 YITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIIS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  83 LFLSLFVW--MCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFL 160
Cdd:MTH00029  86 FTLAILAWaiVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILC 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 161 IGSYNMIYFFHYQVYMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSM 240
Cdd:MTH00029 166 VGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSC 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 241 LFCVIFLG-----------------------CDVFNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNY 297
Cdd:MTH00029 246 MMTIFFLGgwlspldgiptppeafsifeqiaSSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGL 325


                 ....*....
gi 344031524 298 LLFFIGFKI 306
Cdd:MTH00029 326 VILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-306 6.21e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 205.90  E-value: 6.21e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  11 LLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVW 90
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  91 MCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFligsYNMIYFF 170
Cdd:MTH00090  83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIML----HNNSFSF 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 171 HYQVYMWFLIILFPmalvWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFCVIFLGCD 250
Cdd:MTH00090 159 VSSFSLSLFVIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFS 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 344031524 251 VFNLLFYVkltfisFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKI 306
Cdd:MTH00090 235 FLMLFLIF------SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 4-302 1.35e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 161.25  E-value: 1.35e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   4 VLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYpllsNYLSYYISPIFSL 83
Cdd:MTH00058   1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVY----GFQSRSWFSLFGV 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  84 FLSLFVWMCMPFFVKLYSFNLGG----LFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIF 159
Cdd:MTH00058  77 FLLVLLVVFYCFIYGSYYSGSYSslslLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGL 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 160 LIGSYNMIYFFHYQVYMWFliILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMS 239
Cdd:MTH00058 157 CYGSYSLVDFYYSGWLSVL--LFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFS 234

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 344031524 240 MLFCVIFLGcdvfNLLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFI 302
Cdd:MTH00058 235 WLGSVLFFG----GGFVSIMLLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-309 2.91e-36

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 133.54  E-value: 2.91e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   2 EFVLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISP-- 79
Cdd:CHL00032  25 GLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPsi 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  80 -IFSLFLSLFVwmcMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLS 156
Cdd:CHL00032 105 aVISILLSYLV---IPFgyHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 157 FIFLIGSYNMIYFFHYQVYMWFL---IILFPMA-LVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEY 232
Cdd:CHL00032 182 ISLLSNSLSTVDIVEAQSKYGFWgwnLWRQPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASY 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 233 ASILFMSMLFCVIFLG--------------------CDVFNLLFYVKLT-----FISFVFIWARGTLPRFRYDKLMYLAW 287
Cdd:CHL00032 262 LNLLVSSLFVTVLYLGgwnlsipyifipelfeinktGGVFGTTIGIFITlaktyLFLFISITTRWTLPRLRMDQLLNLGW 341

                        330       340
                 ....*....|....*....|..
gi 344031524 288 KCFLSFSLNYLLFFIGFKILLF 309
Cdd:CHL00032 342 KFLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
4-291 4.80e-25

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 101.80  E-value: 4.80e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524   4 VLSLIGSLLLVICVLVSVAFLTLLERKVLGYIQIRKGPnkvglmGIPQPFCDAIKLFTKEQTYPLLSNYLsYYISPIFSL 83
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524  84 FLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTV--MVAGWSCNSNYALLGGLRAVAQTISYEVSLALILLSFIFLI 161
Cdd:COG0650   74 AAMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFflALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031524 162 GSYNMIYFFHYQV---YMWFLIILFPMALVWLTISLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFM 238
Cdd:COG0650  154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 344031524 239 SMLFCVIFLGCDVFN------LLFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKCFL 291
Cdd:COG0650  234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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