|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.48e-139 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 398.43 E-value: 3.48e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 1 M*PTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPTLLTTMSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 350430903 321 TNPLIPTLISLSISLLPLSPMILTIV 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
1.07e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 328.69 E-value: 1.07e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 1 M*PTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSlNPTLLTTMSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....
gi 350430903 321 TNPL 324
Cdd:MTH00135 320 QLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
1.34e-110 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 325.72 E-value: 1.34e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 1 M*PTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPTLLTTMSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*..
gi 350430903 321 TNPLIPT 327
Cdd:MTH00070 321 TNNLLSL 327
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
1.71e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 297.53 E-value: 1.71e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 1 M*PTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPTLLTTMSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITL-PPNPSSKTKQWSTKS 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMfPSTNNMKMKWQFENT 320
|
....*...
gi 350430903 320 STNPLIPT 327
Cdd:MTH00105 321 KPMTLLPT 328
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
1.32e-83 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 257.20 E-value: 1.32e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 1 M*PTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPTLLTTMSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....*.
gi 350430903 321 TNPLIP 326
Cdd:MTH00200 321 SNLLVG 326
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-326 |
6.77e-74 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 232.13 E-value: 6.77e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 11 LSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDITQLT 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 91 YPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPTLLTTMSIMSITLGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 171 NQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPMLSTTLMLTLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 350430903 251 LSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSSTNPLIP 326
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGV 326
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
1.76e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 168.46 E-value: 1.76e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 1 M*PTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 81 TGQWDITQLTyppacaLLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLltsSHSLNPTLLTTMSIM 160
Cdd:MTH00160 82 LMLFNNISSM------LINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFS 312
|
....*
gi 350430903 321 TNPLI 325
Cdd:MTH00160 313 LILNF 317
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-320 |
2.87e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 144.26 E-value: 2.87e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 13 ILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDITqltyp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 93 pacALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPttLLLTSSHSLNPTLLTT---MSIMSITLGGWMG 169
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLSALVGSIGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 170 LNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTlMIAWTKAPMLSTTLMLTLL 249
Cdd:MTH00144 163 LNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLL 241
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 350430903 250 SLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00144 242 SLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
2.43e-39 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 141.84 E-value: 2.43e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 1 M*PTTKLISAlSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVnaqh 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 81 tgQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPTLLTTMSIM 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYcSTITLPPNPSS 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-302 |
1.65e-34 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 128.64 E-value: 1.65e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 11 LSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTgqwditqLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 91 YPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHslNPTLLTTMSIMSITLGGWMGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 171 NQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPMLSTTLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 350430903 251 LSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
11-217 |
1.83e-21 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 94.80 E-value: 1.83e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 11 LSILLGTTLTITSNHWATAWAGLEINTLSIIPMIS-KSHHPRAI*AATKYFLVQATASTLVLF--------SSTVN---- 77
Cdd:COG1007 109 LFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTGSLNlagi 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 78 AQHTGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKL----PPTTLLLTSSHSLNP-- 151
Cdd:COG1007 189 AAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdw 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 350430903 152 -TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKL----TLLAFFTYTLMTSSVFL 217
Cdd:COG1007 269 qLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFA 339
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
2.34e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 90.86 E-value: 2.34e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 13 ILLGTTLTITSNHWATAWAGLEINTLSIIPMI-SKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 87 --------TQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLtsSHSLNPTLLTTMS 158
Cdd:MTH00196 82 vlnsgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 159 IMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNP----KLTLLAFFTYTLMTSSVFLTMNTTNTLKlsTLMIAW 234
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYK--NLIIEF 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 350430903 235 T----KAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRL 296
Cdd:MTH00196 238 SglsrRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
8.95e-18 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 82.36 E-value: 8.95e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 23 SNHWATAWAGLEINTLSIIPMI-SKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDITQL-TYPPACA---- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELsKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 97 ------LLTIAIAIKLGLTPFHFWFPEVLQGSSLT-TAMLLSTAMKLPPTTLLLTSS--HSLNPT---LLTTMSIMSITL 164
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 165 GGWMGLNQTQTRKIMAFSSISHLGWMMVTI----TYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIA-----WT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRdygglAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 350430903 236 KAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-192 |
2.89e-17 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 82.56 E-value: 2.89e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 14 LLGTTLTITSNHWATAWAGLEINTLSIIPMIS-KSHHPRAI*AATKYFLVQATASTLVLF--------SSTVN----AQH 80
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTGSLSfagiAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKL----PPTTLLLTSSHSLNPT---L 153
Cdd:PRK05777 193 LADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqV 272
|
170 180 190
....*....|....*....|....*....|....*....
gi 350430903 154 LTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMV 192
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLV 311
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
11-297 |
1.47e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 80.38 E-value: 1.47e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 11 LSILLGTTLTITSNHWATAWAGLEINTLSI-IPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTV------------- 76
Cdd:TIGR01770 109 LFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLiygftgslnfedl 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 77 -NAQHTGQWDITQLTYppACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKL----PPTTLLLTSSHSLNP 151
Cdd:TIGR01770 189 lLFLSNGMLNISLLLL--GIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIaifaVFLRLFLYILFGFSE 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 152 T---LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKL----TLLAFFTYTLMTS---SVFLTMNT 221
Cdd:TIGR01770 267 AwqiFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLgafGVLSLLRS 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 350430903 222 TN---TLKLSTLMIAWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLA 297
Cdd:TIGR01770 347 YKdewIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-210 |
2.03e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 71.04 E-value: 2.03e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 3 PTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AAT---------KYFLVQATASTLVLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFPSPgntppesglKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 74 STVNAQHTGQ--------------WDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLppT 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 350430903 140 TLLLTSSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTL 210
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAV 415
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-296 |
4.88e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 69.66 E-value: 4.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 11 LSILLGTTLTITSNHWATAWAGLEINTLSIIPMIS-KSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDITQL 89
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGI 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 90 TYPPAC----ALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPTLLTtmSIMSITLG 165
Cdd:MTH00199 184 NSILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 166 GWMGLNQTQTRKIMAFSSISHLGWMM--VTITYNPKL--TLLAFFTYTLMTSSVF---LTMNTTNTL--KLSTLMiawTK 236
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFILfgVAIGSFESIqaSLIYMIIYVIMSICSFsiiLSLKLTKGLivEVSGLS---RK 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 237 APMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRL 296
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
5.98e-13 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 69.41 E-value: 5.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 14 LLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDITQL---- 89
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 90 -TYPP-----ACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAM-KLPP-------TTLLLTSSHSLNPTLLT 155
Cdd:COG0651 197 aELDPglllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailrvlTLLFGADPALFLGTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 156 TMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTY----TLMTSSVFLT----MNTTNTLKL 227
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRDL 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 350430903 228 STLMIAWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-192 |
2.90e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 61.25 E-value: 2.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 38 LSIIPM---ISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQW-----DITQLTYPPA-----CALLTIAIAI 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 105 KLGLTPFHFWFPEVLQGSSLTTAMLLSTAMK-----------LPpttLLLTSSHSLNPTLLTtMSIMSITLGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAA-LGVIGIIYGALVALAQT 297
|
170
....*....|....*....
gi 350430903 174 QTRKIMAFSSISHLGWMMV 192
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLL 316
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-194 |
7.78e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 56.75 E-value: 7.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 38 LSIIPM---ISKSHHPRAI*AATKYFLVQATASTLVLFS----STVNAQHTGQWDITQL---TYPPACALLT-----IAI 102
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLlnlPLPPGVQYWLflaffIAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 103 AIKLGLTPFHFWFPEVLQ-----GSSLTTAMLLSTA------MKLPpttLLLTSSHSLNPtLLTTMSIMSITLGGWMGLN 171
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVqaptaGSVLLAGILLKMGaygllrFSLP---LFPDASHEFAP-IIITLGVIAIIYGALVALA 297
|
170 180
....*....|....*....|...
gi 350430903 172 QTQTRKIMAFSSISHLGWMMVTI 194
Cdd:PRK05846 298 QTDIKKLIAYSSISHMGFVTLGI 320
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-220 |
1.42e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 56.21 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 50 PRAI*AATKYFLVQATASTLVLFSSTV---------NAQHTGQWDITQLTYPPACALLTIA--IAIKLGLTPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSLlyglsggstQLSAIALALITSPSLGLALALVFVIagIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 119 LQGSSLTTAMLLSTAMKLPPTTL---LLTSSHSLNPT----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMM 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180
....*....|....*....|....*....
gi 350430903 192 VTITYNPKLTLLAFFTYTLmtssVFLTMN 220
Cdd:PRK02504 317 IGLVAGTEAGYASMVFYLL----AYLFMN 341
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
1.64e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 55.66 E-value: 1.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 33 LEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDITQLT--YPPACALLT------IAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 105 KLGLTPFHFWFPEVLQG-SSLTTAMLLSTAMKLPPTTLLLTSSHSLNP---------TLLTTMSIMSITLGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 175 TRKIMAFSSISHLGWMMVTITYNPKLTLLA----FFTYTLMTSSVFLT----MNTTNTLKLSTLMIAWTKAPMLSTTLML 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAgllhLLHHALMKGALFLAagaiEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 350430903 247 TLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAY 298
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
1.29e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 53.11 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 55 AATKYFLVQATASTLVLFSSTVNAQHTGQ--WDITQLT---YPPACALLT-----IAIAIKLGLTPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 350430903 125 TTAMLLS-TAMKLPPTTL------LLTSSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTI 194
Cdd:PRK12561 218 PVSMILAgVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-194 |
1.78e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 52.63 E-value: 1.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 50 PRAI*AATKYFLVQATASTLVLFS----STVNAQHTGQWDITQLTYPPACALLT-----IAIAIKLGLTPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAilglYFLGGGTFDLLELLNLPLPFGVQTWLflaffIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 120 QGSSLTTAMLLSTAMKLPPTTLLLTS-------SHSLNPtLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMV 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNlplfpdaSLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
..
gi 350430903 193 TI 194
Cdd:TIGR01972 311 GI 312
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-215 |
2.57e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.06 E-value: 2.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 13 ILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLVQATA------STLVLFSSTVNAQHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 87 TQLT-----YPPACALLT-----IAIAIKLGLTPFHFWFPEV-LQGSSLTTAMLLSTAMKLPPTTLLL-------TSSHS 148
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRlsallrqSGAAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 350430903 149 LNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSV 215
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
79-204 |
5.20e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 48.38 E-value: 5.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 79 QHTGQWDITQL-TYPPACALLTIAIAI-------KLGLTPFHFWFPEVLQGSSLTTAMLLSTAM---------KLPPTTL 141
Cdd:PRK12644 182 QAAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPGFA 261
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 350430903 142 LLTSSHslnPTLLtTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLA 204
Cdd:PRK12644 262 DVPVWR---PTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALA 320
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
19-213 |
7.81e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 47.62 E-value: 7.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 19 LTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI*AATKYFLV------QATASTLVLFSS--------------TVNA 78
Cdd:PRK06458 123 LALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANaatvmgdgemailwTELL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 79 QHTGQWDITQLTYppACALLTIAIAIKLGLTPFHFWFPEV-LQGSSLTTAM----LLSTAMK--LPPTTLLLTSSHSLNP 151
Cdd:PRK06458 203 KHASLLDPTLMKL--AFVFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALlsgvLLNVALYavLRYYILIDAAIGSDFP 280
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 350430903 152 -TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTS 213
Cdd:PRK06458 281 gRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHS 343
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
10-273 |
2.62e-05 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 45.76 E-value: 2.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 10 ALSILLGTTLTITSNHWATAWAGLEINTLS---IIPMISKshhpRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDI 86
Cdd:PRK08668 104 ALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 87 ----------TQLTYPPACALLTIAIAI-KLGLTPFHFWFPE-----------VLQGS-SLTTAMLLSTAMKLPPTTLLL 143
Cdd:PRK08668 180 adisqglindTSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLF 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 144 T-----SSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYnpkLTLLAF-------FTYTLM 211
Cdd:PRK08668 260 SefgtyRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGL---GTSLGFagglfhvFNHALF 336
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 350430903 212 TSSVFLTMNT----TNTLKLSTLMIAWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQ 273
Cdd:PRK08668 337 KGLFFLIFAAviyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISK 402
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-196 |
3.45e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.59 E-value: 3.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 48 HHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDITQLTYPPAC--------------ALLTIAIAIKLGLTPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghplflitlILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 114 WFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPT-----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
....*...
gi 350430903 189 WMMVTITY 196
Cdd:PRK12649 316 YLMTMYGY 323
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-192 |
3.99e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 45.14 E-value: 3.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 48 HHPRAI*AATKYFLV---------------QATASTLVLfsSTVNAQhtGQWDITQLTYPPACALLTIAIAIKLGLTPFH 112
Cdd:COG1009 156 EKPSARRAARKAFLVtrvgdlglllgilllGAIAGTLNF--SELLAA--APTILSSPLLTLILLLLLLGAFGKSAQFPLH 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 113 FWFPEVLQGSSLTTAMLLSTAM---------KLPPttlLLtsshSLNPTLLTTMSIM-SITL--GGWMGLNQTQTRKIMA 180
Cdd:COG1009 232 FWLPDAMEGPTPVSALLHAATMvkagvyllaRLSP---LF----ALSPVWLTVVAIIgAITAlfAALIALAQTDIKRVLA 304
|
170
....*....|..
gi 350430903 181 FSSISHLGWMMV 192
Cdd:COG1009 305 YSTVSQLGYMFL 316
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
55-263 |
4.48e-05 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 44.99 E-value: 4.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 55 AATKYFLVQATASTLVL--FSST--VNAQHTGQWDI------TQLTYPPAC----ALLTIAIAIKLGLTPFHFWFPEVLQ 120
Cdd:CHL00049 163 ATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTPDVYE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 121 GSSLTTAMLLSTAMK---LPPTTLLLTSSHSLNPT----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMV- 192
Cdd:CHL00049 243 GSPTPVVAFLSVTSKvaaSALATRIFDIPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIg 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 193 TITYNPKLTLLAFFTYTLmtssVFLTMN-------TTNTLKLSTLMI-----AWTKAPMLSTTLMLTLLSLSGLPPLTGF 260
Cdd:CHL00049 323 IIVGDSNDGYASMITYML----FYIFMNlgtfaciVLFGLRTGTDNIrdyagLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
...
gi 350430903 261 LPK 263
Cdd:CHL00049 399 FGK 401
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
110-218 |
1.09e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 44.26 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 110 PFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSL--NPT---LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSI 184
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
90 100 110
....*....|....*....|....*....|....*...
gi 350430903 185 SHLGWMMVTITYNPKLTLLAFFTYT----LMTSSVFLT 218
Cdd:PRK12650 306 SQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFML 343
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-204 |
2.52e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 55 AATKYFLVQATASTLVL--FSSTVNAQHTGQWDITQL---TYPPACALL-----TIAIAIKLGLTPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILvsFLGLVWLSGASSFDYEPLrshTLPLSTQLLllapiLVGFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 124 LTTAMLLSTAMKLPPTTLL-------LTSSHSLNPTLlTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITY 196
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglfPEAWVYLAPWL-ATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAA 316
|
....*...
gi 350430903 197 NPKLTLLA 204
Cdd:PRK06473 317 ATPLSILA 324
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
2.57e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 42.78 E-value: 2.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 33 LEINTLSIIPMIS-KSHHPRAI*AATKYFLVQATASTLVLFSStvnAQHTGQWDITQLTYPP-------------ACALL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAvkmsenptvvakiALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 99 TIAIAIKLGLTPFHFWFPEVLQG--SSLTTAMLLSTAMKLPPTTLLLTSSHSLNPTLLTTMSIMSI------TLGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWVIIIlgcltmFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 171 NQTQTRKIMAFSSISHLGWMM------VTITYNPKLTLLAF----------FTYTLMTSSVFLT----MNTTNTLKLSTL 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMASYGEialaggiyhiVNHALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 350430903 231 MIAWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
100-194 |
1.25e-03 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 40.70 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 100 IAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAM-KLPPTTL------LLTSSHSLNPTLLTTMSIMSITLGGWMGLNQ 172
Cdd:CHL00011 219 IAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILlKMGAYGLirinmeLLPHAHSIFSPWLVIVGAIQIIYAASTSLGQ 298
|
90 100
....*....|....*....|..
gi 350430903 173 TQTRKIMAFSSISHLGWMMVTI 194
Cdd:CHL00011 299 RNLKKRIAYSSVSHMGFIIIGI 320
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-228 |
1.38e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.46 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 55 AATKYFLVQATASTLVL--------FSSTVNAQHTgqwDITQLTYPPACALLT-----IAIAIKLGLTPFHFWFPEVLQG 121
Cdd:PRK02546 166 AATKFILYTAGSSLFILlaalamafYGDTPTFDMT---ALAAKDFGLGFQLLCyagllIAYGVKLPIVPLHTWLPDAHGE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 122 SSLTTAMLLS-TAMKLPPTTLL------LTSSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTI 194
Cdd:PRK02546 243 ATAPVHMLLAgILLKMGGYALLrmnagmLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGI 322
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 350430903 195 TYNPKL----TLLAFFTYTLMTSSVFL----TMNTTNTLKLS 228
Cdd:PRK02546 323 GSFTDLgtsgAMLQMISHGLIGASLFFlvgaTYDRTHTLMLD 364
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.46e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 40.32 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 33 LEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDITQLTY--PPACALLTIAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 111 FHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPT--LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 189 WMMVTitynPKLTLLAFFTYTLMTSSVFL---TMNTTNTLKLSTLMIAWTKAPMLSTTLMLTLLSLsglpPLTGFLPKWL 265
Cdd:PRK07234 283 FILAA----PLVGGLYALAHGLVKSTLFLcagALPSRNFTELISQMLGIGKWIPLTMASFSIAGFP----LLAGFVSKVL 354
|
....*.
gi 350430903 266 IMQELI 271
Cdd:PRK07234 355 TLKNLL 360
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-220 |
2.91e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.35 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 91 YPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPT-----LLTTMSIMSITLG 165
Cdd:PRK12646 209 FIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFG 288
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 350430903 166 GWMGLNQTQTRKIMAFSSISHLGWMMVTI------TYNPKLTLLAFFTYTLMtSSVFLTMN 220
Cdd:PRK12646 289 SITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMN 348
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
3.70e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 38.95 E-value: 3.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 33 LEINTLSIIPMISKSHHPRAI*AATKYFLVQATASTLVLFSSTVNAQHTGQWDITQL-----------TYPPACALLTIA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptnrAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 102 IAIKLGLTPFHFWFPEVLQGS-SLTTAMLLSTAMK-----------------LPPTTLLLTsshslnpTLLTTMSIMSIT 163
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKvmiyliirivydvfkanFVFTTLPFN-------NVFMILAALAIV 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 164 LGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTY----TLMTSSVFLTMNTT----NTLKLSTLMIAWT 235
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLEDCLNLWK 371
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 350430903 236 KAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRL 296
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-194 |
4.46e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 38.75 E-value: 4.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 100 IAIAIKLGLTPFHFWFPEV-----LQGSSLTTAMLLSTA----MKLPPTTLLLtSSHSLNPTLLtTMSIMSITLGGWMGL 170
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLGgyglVRLSWPILPL-GAQNLAPAVI-AMGIVGIVYGSFATC 315
|
90 100
....*....|....*....|....
gi 350430903 171 NQTQTRKIMAFSSISHLGWMMVTI 194
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMGLVSITL 339
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
100-217 |
5.98e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.51 E-value: 5.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 100 IAIAIKLGLTPFHFWFPEV-----LQGSSLTTAMLLstamKLPPTTLLLTS-------SHSLNPtLLTTMSIMSITLGGW 167
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQAhveapVAGSVILAGILL----KLGGYGFLRFSwplfpaaSEYFAP-LIVMLSVIAVIYGSL 291
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 350430903 168 MGLNQTQTRKIMAFSSISHLGwmmvtitynpkLTLLAFFTYTL--MTSSVFL 217
Cdd:MTH00204 292 TTCRQVDFKRLIAYSSVAHMG-----------LVPLGLFTHTIegLVAAVFL 332
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-203 |
6.57e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 38.15 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 96 ALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTSSHSLNPTL-------LTTMSIMSITLGGWM 168
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTwslvapgLAIIGTISVIYGALS 288
|
90 100 110
....*....|....*....|....*....|....*
gi 350430903 169 GLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLL 203
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLL 323
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-194 |
6.98e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 38.17 E-value: 6.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 59 YFLVQATASTLVLFSSTVNA-QHTGQWDITQLTYPPAC-----ALLTIAIAIKLGLTPFHFWFPEVLQG-----SSLTTA 127
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPAspsnvSALMSG 245
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 350430903 128 MLLSTAMKLPPTTLLLTSSHSLN-PTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTI 194
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPELWwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGI 313
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| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-217 |
7.27e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 38.21 E-value: 7.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430903 82 GQWDITQLTYPPACALLTIAIAI----KLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLL------LTSSHSLNP 151
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypfLSSTYWFNP 244
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 350430903 152 TLLTTMSiMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYN-PKLTLLAFFTYTLMTSSVFL 217
Cdd:MTH00207 245 ALLLTAS-LTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFV 310
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