|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.61e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 394.19 E-value: 1.61e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 1 MAPTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPTLLTTMSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 350430915 321 TNPLIPTLISLSISLLPLSPMILTIV 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
7.06e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 326.76 E-value: 7.06e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 1 MAPTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSlNPTLLTTMSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....
gi 350430915 321 TNPL 324
Cdd:MTH00135 320 QLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
8.78e-110 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 323.80 E-value: 8.78e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 1 MAPTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPTLLTTMSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*..
gi 350430915 321 TNPLIPT 327
Cdd:MTH00070 321 TNNLLSL 327
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
7.91e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 295.99 E-value: 7.91e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 1 MAPTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPTLLTTMSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITL-PPNPSSKTKQWSTKS 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMfPSTNNMKMKWQFENT 320
|
....*...
gi 350430915 320 STNPLIPT 327
Cdd:MTH00105 321 KPMTLLPT 328
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
1.52e-82 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 254.12 E-value: 1.52e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 1 MAPTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPTLLTTMSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....*.
gi 350430915 321 TNPLIP 326
Cdd:MTH00200 321 SNLLVG 326
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-326 |
6.18e-73 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 229.82 E-value: 6.18e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 11 LSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDITQLT 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 91 YPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPTLLTTMSIMSITLGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 171 NQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPMLSTTLMLTLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 350430915 251 LSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSSTNPLIP 326
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGV 326
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
1.57e-47 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 163.46 E-value: 1.57e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 1 MAPTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQH 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 81 TGQWDITQLTyppacaLLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLlttSHSLNPTLLTTMSIM 160
Cdd:MTH00160 82 LMLFNNISSM------LINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFS 312
|
....*
gi 350430915 321 TNPLI 325
Cdd:MTH00160 313 LILNF 317
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-320 |
4.71e-39 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 140.79 E-value: 4.71e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 13 ILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDITqltyp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 93 pacALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLP-PTTLLLTTSHSLNPTLLTTMSIMSITLGGWMGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVApLFLLSNFLDLYWLAYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 172 QTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTlMIAWTKAPMLSTTLMLTLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 350430915 252 SGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTITLPPNPSSKTKQWSTKSS 320
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
3.72e-38 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 138.76 E-value: 3.72e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 1 MAPTTKLISAlSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVnaqh 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 81 tgQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPTLLTTMSIM 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 241 STTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYcSTITLPPNPSS 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-302 |
5.95e-33 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 124.78 E-value: 5.95e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 11 LSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTgqwditqLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 91 YPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHslNPTLLTTMSIMSITLGGWMGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 171 NQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSVFLTMNTTNTLKLSTLMIAWTKAPMLSTTLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 350430915 251 LSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
11-217 |
5.97e-22 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 96.34 E-value: 5.97e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 11 LSILLGTTLTITSNHWATAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQATASTLVLF--------SSTVN---- 77
Cdd:COG1007 109 LFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTGSLNlagi 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 78 AQHTGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKL--------PPTTLLLTTSHSL 149
Cdd:COG1007 189 AAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaallrLLVEAFPGLAADW 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 350430915 150 NPtLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKL----TLLAFFTYTLMTSSVFL 217
Cdd:COG1007 269 QL-LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFA 339
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
3.04e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 90.47 E-value: 3.04e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 13 ILLGTTLTITSNHWATAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 87 --------TQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLttSHSLNPTLLTTMS 158
Cdd:MTH00196 82 vlnsgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 159 IMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNP----KLTLLAFFTYTLMTSSVFLTMNTTNTLKlsTLMIAW 234
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYK--NLIIEF 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 350430915 235 T----KAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRL 296
Cdd:MTH00196 238 SglsrRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.61e-17 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 81.59 E-value: 1.61e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 23 SNHWATAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDITQL-TYPPACA---- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELsKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 97 ------LLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPT------LLTTMSIMSITL 164
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 165 GGWMGLNQTQTRKIMAFSSISHLGWMMVTI----TYNPKLTLLAFFTYTLMTSSVFL--------TMNTTNTLKLSTLmi 232
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL-- 238
|
250 260 270
....*....|....*....|....*....|....*.
gi 350430915 233 aWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQ 268
Cdd:pfam00361 239 -AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-192 |
5.43e-17 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 81.79 E-value: 5.43e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 14 LLGTTLTITSNHWATAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQATASTLVLF--------SSTVN----AQH 80
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTGSLSfagiAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 81 TGQWDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKL--------PPTTLLLTTSHSLNPt 152
Cdd:PRK05777 193 LADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafavllrLLVVAFGGLSEDWQQ- 271
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 350430915 153 LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMV 192
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLV 311
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
11-297 |
6.17e-17 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 81.53 E-value: 6.17e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 11 LSILLGTTLTITSNHWATAWAGLEINTLSI-IPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTV------------- 76
Cdd:TIGR01770 109 LFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLiygftgslnfedl 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 77 -NAQHTGQWDITQLTYppACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTS-------HS 148
Cdd:TIGR01770 189 lLFLSNGMLNISLLLL--GIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFlyilfgfSE 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 149 LNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKL----TLLAFFTYTLMTS---SVFLTMNT 221
Cdd:TIGR01770 267 AWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLgafGVLSLLRS 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 350430915 222 TN---TLKLSTLMIAWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLA 297
Cdd:TIGR01770 347 YKdewIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
1.55e-13 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 70.95 E-value: 1.55e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 14 LLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDITQL---- 89
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 90 -TYPP-----ACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAM---------KLPPTTLLLTTSHSLNPTLL 154
Cdd:COG0651 197 aELDPglllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtkvgvyailRVLTLLFGADPALFLGTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 155 TtMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTY----TLMTSSVFLT----MNTTNTLK 226
Cdd:COG0651 277 V-LGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 227 LSTLMIAWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRL 296
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-296 |
2.55e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 70.43 E-value: 2.55e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 11 LSILLGTTLTITSNHWATAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDITQL 89
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGI 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 90 TYPPAC----ALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPTLLTtmSIMSITLG 165
Cdd:MTH00199 184 NSILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 166 GWMGLNQTQTRKIMAFSSISHLGWMM--VTITYNPKL--TLLAFFTYTLMTSSVF---LTMNTTNTL--KLSTLMiawTK 236
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFILfgVAIGSFESIqaSLIYMIIYVIMSICSFsiiLSLKLTKGLivEVSGLS---RK 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 237 APMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRL 296
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
2-210 |
9.39e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 69.12 E-value: 9.39e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 2 APTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAI---------EAATKYFLVQATASTLVLF 72
Cdd:MTH00198 186 GPRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLF 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 73 SSTVNAQHTGQ--------------WDITQLTYPPACALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPP 138
Cdd:MTH00198 266 GCALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTV 345
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 350430915 139 TTLLLttSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTL 210
Cdd:MTH00198 346 YILLT--SLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAV 415
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-192 |
1.06e-08 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 56.24 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 38 LSIIPM---ISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQW-----DITQLTYPPA-----CALLTIAIAI 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 105 KLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLP--------PTTLLLTTSHSLNPTLLTtMSIMSITLGGWMGLNQTQTR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMggygllrfALPLFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLK 300
|
170
....*....|....*.
gi 350430915 177 KIMAFSSISHLGWMMV 192
Cdd:COG1008 301 RLIAYSSVSHMGFVLL 316
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-220 |
2.33e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 55.44 E-value: 2.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 50 PRAIEAATKYFLVQATASTLVLFSSTV---------NAQHTGQWDITQLTYPPACALLTIA--IAIKLGLTPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSLlyglsggstQLSAIALALITSPSLGLALALVFVIagIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 119 LQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNP-------TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMM 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPsfdeqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180
....*....|....*....|....*....
gi 350430915 192 VTITYNPKLTLLAFFTYTLmtssVFLTMN 220
Cdd:PRK02504 317 IGLVAGTEAGYASMVFYLL----AYLFMN 341
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
6.61e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 53.73 E-value: 6.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDITQLT--YPPACALLT------IAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 105 KLGLTPFHFWFPEVLQG-SSLTTAMLLSTAMK---------LPPTTLLLTTSHSLNPTLLTTMSIMSITLGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKvavyaliriYFTVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 175 TRKIMAFSSISHLGWMMVTITYNPKLTLLA----FFTYTLMTSSVFLT----MNTTNTLKLSTLMIAWTKAPMLSTTLML 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAgllhLLHHALMKGALFLAagaiEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 350430915 247 TLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRLAY 298
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-215 |
6.76e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 53.99 E-value: 6.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 13 ILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQATA------STLVLFSSTVNAQHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 87 TQLT-----YPPACALLT-----IAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPT---- 152
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 350430915 153 ----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTSSV 215
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-194 |
9.72e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 53.28 E-value: 9.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 38 LSIIPM---ISKSHHPRAIEAATKYFLVQATASTLVLFS----STVNAQHTGQWDITQL---TYPPACALLT-----IAI 102
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLlnlPLPPGVQYWLflaffIAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 103 AIKLGLTPFHFWFPEVLQ-----GSSLTTAMLLSTA---MKLPPTTLLLTTSHSLNPtLLTTMSIMSITLGGWMGLNQTQ 174
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVqaptaGSVLLAGILLKMGaygLLRFSLPLFPDASHEFAP-IIITLGVIAIIYGALVALAQTD 300
|
170 180
....*....|....*....|
gi 350430915 175 TRKIMAFSSISHLGWMMVTI 194
Cdd:PRK05846 301 IKKLIAYSSISHMGFVTLGI 320
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
19-213 |
1.93e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 49.16 E-value: 1.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 19 LTITSNHWATAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLV------QATASTLVLFSS--------------TVNA 78
Cdd:PRK06458 123 LALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANaatvmgdgemailwTELL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 79 QHTGQWDITQLTYppACALLTIAIAIKLGLTPFHFWFPE-----------VLQGSSLTTAMLlstAMKLPPTTLLLTTSH 147
Cdd:PRK06458 203 KHASLLDPTLMKL--AFVFLLIGFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALY---AVLRYYILIDAAIGS 277
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 350430915 148 SLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTYTLMTS 213
Cdd:PRK06458 278 DFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHS 343
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-263 |
3.05e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 48.85 E-value: 3.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 1 MAPTTKLISALSILLGTTLTITSNHWATAWAGLEINTLSIIPMISKSHHP-RAIEAATKYFLVQATASTLVL--FSST-- 75
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLyg 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 76 VNAQHTGQWDI------TQLTYPPAC----ALLTIAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTT 145
Cdd:CHL00049 188 LSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRI 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 146 SHSLNPT-------LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMV-TITYNPKLTLLAFFTYTLmtssVFL 217
Cdd:CHL00049 268 FDIPFYFssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNDGYASMITYML----FYI 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 350430915 218 TMN-------TTNTLKLSTLMI-----AWTKAPMLSTTLMLTLLSLSGLPPLTGFLPK 263
Cdd:CHL00049 344 FMNlgtfaciVLFGLRTGTDNIrdyagLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-194 |
3.59e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 48.40 E-value: 3.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 50 PRAIEAATKYFLVQATASTLVLFS----STVNAQHTGQWDITQLTYPPACALLT-----IAIAIKLGLTPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAilglYFLGGGTFDLLELLNLPLPFGVQTWLflaffIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 121 GSSLTTAMLLSTAMKLPPTTLLLTTSHSLNP-------TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVT 193
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
.
gi 350430915 194 I 194
Cdd:TIGR01972 312 I 312
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
8.73e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 47.33 E-value: 8.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 55 AATKYFLVQATASTLVLFSSTVNAQHTGQ--WDITQLT---YPPACALLT-----IAIAIKLGLTPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 350430915 125 TTAMLLSTAMKLP-------PTTLLLTTSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTI 194
Cdd:PRK12561 218 PVSMILAGVLLKMggyalirFNVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-196 |
4.90e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.20 E-value: 4.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 48 HHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDITQLTYPPAC--------------ALLTIAIAIKLGLTPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghplflitlILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 114 WFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPT-----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
....*...
gi 350430915 189 WMMVTITY 196
Cdd:PRK12649 316 YLMTMYGY 323
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
6.73e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 44.70 E-value: 6.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 33 LEINTLSIIPMIS-KSHHPRAIEAATKYFLVQATASTLVLFSStvnAQHTGQWDITQLTYPP-------------ACALL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAvkmsenptvvakiALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 99 TIAIAIKLGLTPFHFWFPEVL-QGSSLTTAMLLSTAMKLPPTTLLLTTS---HSLNPT----LLTTMSIMSITLGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYpAAPSSISAMLLVIKQAGLYALARVLFSiygPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 171 NQTQTRKIMAFSSISHLGWMM------VTITYNPKLTLLAF----------FTYTLMTSSVFLT----MNTTNTLKLSTL 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMASYGEialaggiyhiVNHALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 350430915 231 MIAWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
79-204 |
9.28e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 44.14 E-value: 9.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 79 QHTGQWDITQL-TYPPACALLTIAIAI-------KLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTS---H 147
Cdd:PRK12644 182 QAAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLApgfA 261
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 350430915 148 SLNPTLLTTMSIMSIT--LGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLA 204
Cdd:PRK12644 262 DVPVWRPTVLVLGLATmlLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALA 320
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
10-273 |
1.56e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 43.45 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 10 ALSILLGTTLTITSNHWATAWAGLEINTLS---IIPMISKshhpRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDI 86
Cdd:PRK08668 104 ALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 87 ----------TQLTYPPACALLTIAIAI-KLGLTPFHFWFPE-----------VLQGS---------SLTTAMLLSTAMk 135
Cdd:PRK08668 180 adisqglindTSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDayseapqsfsaVLSGQlsklgaygfLLVLYVLPGTKL- 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 136 lpPTTLLLTTSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYnpkLTLLAF-------FTY 208
Cdd:PRK08668 259 --FSEFGTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGL---GTSLGFagglfhvFNH 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 350430915 209 TLMTSSVFLTMNT----TNTLKLSTLMIAWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQ 273
Cdd:PRK08668 334 ALFKGLFFLIFAAviyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISK 402
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-192 |
3.01e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 42.45 E-value: 3.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 48 HHPRAIEAATKYFLV---------------QATASTLVLfsSTVNAQhtGQWDITQLTYPPACALLTIAIAIKLGLTPFH 112
Cdd:COG1009 156 EKPSARRAARKAFLVtrvgdlglllgilllGAIAGTLNF--SELLAA--APTILSSPLLTLILLLLLLGAFGKSAQFPLH 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 113 FWFPEVLQG----SSL----T--TA-----MLLSTAMklppttlllttshSLNPTLLTTMSIM-SITL--GGWMGLNQTQ 174
Cdd:COG1009 232 FWLPDAMEGptpvSALlhaaTmvKAgvyllARLSPLF-------------ALSPVWLTVVAIIgAITAlfAALIALAQTD 298
|
170
....*....|....*...
gi 350430915 175 TRKIMAFSSISHLGWMMV 192
Cdd:COG1009 299 IKRVLAYSTVSQLGYMFL 316
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.55e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 40.32 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQATASTLVLFSSTVNAQHTGQWDITQLTY--PPACALLTIAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 111 FHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTSHSLNPT--LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 189 WMMVTitynPKLTLLAFFTYTLMTSSVFL---TMNTTNTLKLSTLMIAWTKAPMLSTTLMLTLLSLsglpPLTGFLPKWL 265
Cdd:PRK07234 283 FILAA----PLVGGLYALAHGLVKSTLFLcagALPSRNFTELISQMLGIGKWIPLTMASFSIAGFP----LLAGFVSKVL 354
|
....*.
gi 350430915 266 IMQELI 271
Cdd:PRK07234 355 TLKNLL 360
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-204 |
2.52e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 39.68 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 55 AATKYFLVQATASTLVL--FSSTVNAQHTGQWDITQL---TYPPACALL-----TIAIAIKLGLTPFHFWFPEVLQGSSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILvsFLGLVWLSGASSFDYEPLrshTLPLSTQLLllapiLVGFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 125 TTAMLLSTAMKLPPTTLLLTTSHSLNPTL-------LTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLRFGVGLFPEAwvylapwLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
....*..
gi 350430915 198 PKLTLLA 204
Cdd:PRK06473 318 TPLSILA 324
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
110-218 |
2.92e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 39.64 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 110 PFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLTTS--HSLNPT---LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSI 184
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVwnwLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
90 100 110
....*....|....*....|....*....|....*...
gi 350430915 185 SHLGWMMVTITYNPKLTLLAFFTYT----LMTSSVFLT 218
Cdd:PRK12650 306 SQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFML 343
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-194 |
5.32e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 38.56 E-value: 5.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 59 YFLVQATASTLVLFSSTVNA-QHTGQWDITQLTYPPAC-----ALLTIAIAIKLGLTPFHFWFPEVLQG-----SSLTTA 127
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPAspsnvSALMSG 245
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 350430915 128 MLLSTAMKLPPTTLLLTTSHSLN-PTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTI 194
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPELWwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGI 313
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-296 |
5.84e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 38.56 E-value: 5.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 152 TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMVTITYNPKLTLLAFFTY----TLMTSSVFLTMNTT----N 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfG 359
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 350430915 224 TLKLSTLMIAWTKAPMLSTTLMLTLLSLSGLPPLTGFLPKWLIMQELIKQETTTTATTISMLSLLGLFFYLRL 296
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-194 |
7.54e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 37.98 E-value: 7.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430915 100 IAIAIKLGLTPFHFWFPEV-----LQGSSLTTAMLLST---AMKLPPTTLLLTTSHSLNPTLLtTMSIMSITLGGWMGLN 171
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLggyGLVRLSWPILPLGAQNLAPAVI-AMGIVGIVYGSFATCR 316
|
90 100
....*....|....*....|...
gi 350430915 172 QTQTRKIMAFSSISHLGWMMVTI 194
Cdd:MTH00226 317 QIDVKRLVAYSSVAHMGLVSITL 339
|
|
|