|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.30e-141 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 403.05 E-value: 5.30e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 1 MTPTTKLISTMSILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 81 TGQWDITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSLNPALLTTMSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 161 SIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 241 NTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYCSTITLPPNPSSKIKQWFTKNP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 350430931 321 TSPLISTLTSLSILLLPLSPMILTIT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-323 |
9.10e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 331.50 E-value: 9.10e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 1 MTPTTKLISTMSILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 81 TGQWDITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSLNPALLTTMSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 161 SIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTLMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 241 NTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYCSTITLPPNPSSKIKQWFTKNP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
...
gi 350430931 321 TSP 323
Cdd:MTH00070 321 TNN 323
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-320 |
4.74e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 329.46 E-value: 4.74e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 1 MTPTTKLISTMSILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 81 TGQWDITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSlNPALLTTMSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 161 SIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTLMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 241 NTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYCSTITLPPNPSSKIKQWFTKNP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-320 |
1.82e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 297.53 E-value: 1.82e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 1 MTPTTKLISTMSILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 81 TGQWDITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSLNPALLTTMSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 161 SIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 241 NTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYCSTITLPPNPSSKIKQWFTKNP 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.77e-84 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 258.75 E-value: 2.77e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 1 MTPTTKLISTMSILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 81 TGQWDITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSLNPALLTTMSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 161 SIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 241 NTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYCSTITLPPNPSSKIKQWFTKNP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 350430931 321 TSPLISTLTSLSILLLPLSPMILTIT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
12-323 |
7.05e-76 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 237.14 E-value: 7.05e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 12 SILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDITQLTY 91
Cdd:MTH00041 12 SIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 92 PPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSLNPALLTTMSIMSIALGGWMGLN 171
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 172 QTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTLMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSL 251
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 350430931 252 SGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYCSTITLPPNPSSKIKQWFTKNPTSP 323
Cdd:MTH00041 252 GGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITV 323
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-313 |
1.64e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 173.86 E-value: 1.64e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 1 MTPTTKLISTMSILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 81 tgqwdITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLlitSHSLNPALLTTMSIM 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 161 SIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTLMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 350430931 241 NTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYCSTITLPPNPSSKIK 313
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLK 305
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
6-315 |
6.61e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 148.50 E-value: 6.61e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 6 KLISTMSILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWD 85
Cdd:MTH00144 6 NLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 86 ITqltyppacVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPttLLLITSHSLNPALLTT---MSIMSI 162
Cdd:MTH00144 86 SM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLSA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 163 ALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTlMTSWTKTPMLNT 242
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGL 234
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 350430931 243 TLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYCSTITLPPNPSSKIKQW 315
Cdd:MTH00144 235 SIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
4.07e-41 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 146.46 E-value: 4.07e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 1 MTPTTKLISTMSILlGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVnaqh 80
Cdd:MTH00011 4 TFPTMFLFSSTMTL-GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 81 tgQWDITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSLNPALLTTMSIM 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 161 SIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTLMTSWTKTPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 241 NTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYcSTITLPPNPSS 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-302 |
3.15e-36 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 133.26 E-value: 3.15e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 12 SILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTgqwditqLTY 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 92 PPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPttLLLITSHSLNPALLTTMSIMSIALGGWMGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 172 QTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTLHTTNTLKLSTLMTSWTKTPMLNTTLMLTLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 350430931 252 SGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-298 |
4.85e-23 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 99.42 E-value: 4.85e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 10 TMSILLGTMVTITSNHWAMAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLVLF--------SSTVN--- 77
Cdd:COG1007 108 LLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTGSLNlag 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 78 -AQHTGQWDITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKL----PPTTLLLITSHSLNPA 152
Cdd:COG1007 188 iAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAD 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 153 ---LLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKL----TLLAFLTYTLMTSSIFLTL-----H 220
Cdd:COG1007 268 wqlLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFAVIlllsrK 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 350430931 221 TTNTLKLSTLMTSWTKTPMLNTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAY 298
Cdd:COG1007 348 GGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
6.94e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 95.10 E-value: 6.94e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 13 ILLGTMVTITSNHWAMAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 87 --------TQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLppTTLLLITSHSLNPALLTTMS 158
Cdd:MTH00196 82 vlnsgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 159 IMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTY----TLMTSSIFLTLHTTNTLK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYlfiyIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 350430931 233 SWTKTPMLNTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
2.14e-20 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 91.81 E-value: 2.14e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 14 LLGTMVTITSNHWAMAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLVLF--------SSTVN----AQH 80
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTGSLSfagiAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 81 TGQWDITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKL----PPTTLLLITSHSLNPA---L 153
Cdd:PRK05777 193 LADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 154 LTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKL----TLLAFLTYTLMTSSIF-LTLHTTNTLKLS 228
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAFgVISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 350430931 229 TLMTSWT----KTPMLNTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
2.27e-19 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 86.60 E-value: 2.27e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 23 SNHWAMAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDITQL-TYPPAC----- 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELsKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 96 -----VLLTTAIAIKLGLTPFHFWFPEVLQGSSLT-TAMLLSTAMKLPP---TTLLLITSHSLNPA--LLTTMSIMSIAL 164
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGyglIRRSLLYLPSSPFIqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 165 GGWMGLNQTQIRKIMAFSSISHLGWMMVTI----TYNPKLTLLAFLTYTLMTSSIFL--------TLHTTNTLKLSTLmt 232
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL-- 238
|
250 260 270
....*....|....*....|....*....|....*.
gi 350430931 233 sWTKTPMLNTTLMLTLLSLSGLPPLTGFLPKWLIMQ 268
Cdd:pfam00361 239 -AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
13-297 |
2.09e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 85.77 E-value: 2.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 13 ILLGTMVTITSNHWAMAWAGLEINTLSI-IPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTV--------------N 77
Cdd:TIGR01770 111 ALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLiygftgslnfedllL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 78 AQHTGQWDITQLTYppACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLL-------ITSHSLN 150
Cdd:TIGR01770 191 FLSNGMLNISLLLL--GIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 151 PALLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKL----TLLAFLTYTLMTSSIFLTLHTTNTLK 226
Cdd:TIGR01770 269 QIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSLLRSYK 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 350430931 227 ------LSTLMTSWTKTPMLNTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLA 297
Cdd:TIGR01770 349 dewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
9.55e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 77.75 E-value: 9.55e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 13 ILLGTMVTITSNHWAMAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDITQLTY 91
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 92 PPAC----VLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSLNPALLTtmSIMSIALGGW 167
Cdd:MTH00199 186 ILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 168 MGLNQTQIRKIMAFSSISHLGWMM--VTITYNPKL--TLLAFLTYTLMTS---SIFLTLHTTNTLKLSTLMTSwTKTPML 240
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILfgVAIGSFESIqaSLIYMIIYVIMSIcsfSIILSLKLTKGLIVEVSGLS-RKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 350430931 241 NTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRL 296
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
1.58e-15 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 77.11 E-value: 1.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 14 LLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDITQL---- 89
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 90 -TYPP-----ACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAM-KLPP----TTLLLITSHSLNPA---LLT 155
Cdd:COG0651 197 aELDPglllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailRVLTLLFGADPALFlgtLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 156 TMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTY----TLMTSSIFLT----LHTTNTLKL 227
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRDL 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 350430931 228 STLMTSWTKTPMLNTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
1.95e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 64.88 E-value: 1.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 15 LGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAI---------EAATKYFLVQAAASTLVLFSSTVNAQHTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 84 ------------WDITQLTYPPACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLppTTLLLITSHSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 152 ALLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTL-------LAFLTYTLMTSSIFLTLHTTNT 224
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLqaswtyaVTYLVSALASFTVICTLEEFGT 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 225 L------------------KLSTLMTSWTKTPMLNTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLS 286
Cdd:MTH00198 437 RtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 350430931 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-192 |
5.05e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 63.56 E-value: 5.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQW-----DITQLTYPPA-----CVLLTTAIAI 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 105 KLGLTPFHFWFPEVLQGSSLTTAMLLSTAMK-----------LPpttLLLITSHSLNPALLTtMSIMSIALGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAA-LGVIGIIYGALVALAQT 297
|
170
....*....|....*....
gi 350430931 174 QIRKIMAFSSISHLGWMMV 192
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLL 316
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
1.68e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 61.82 E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDITQLT--YPPACVLLT------TAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 105 KLGLTPFHFWFPEVLQG-SSLTTAMLLSTAMKLPPTTLLLITSH----------SLNPALLTTMsIMSIALGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfrfalGLGWLLAVLA-LLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 174 QIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYT----LMTSSIFLTL----HTTNTLKLSTLMTSWTKTPMLNTTLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLAAgaieVTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 350430931 246 LTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRLAY 298
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-221 |
2.47e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.56 E-value: 2.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 51 RAIEAATKYFLVQAAASTLVL--FSST--VNAQHTGQWDI------TQLTYPPAC----VLLTTAIAIKLGLTPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 117 EVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSLNPA-------LLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190
....*....|....*....|....*....|...
gi 350430931 190 MMV-TITYNPKLTLLAFLTYTLMtsSIFLTLHT 221
Cdd:CHL00049 319 VIIgIIVGDSNDGYASMITYMLF--YIFMNLGT 349
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
15-192 |
7.33e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 60.06 E-value: 7.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 15 LGTMVTITSNHWAMAWAGLEinTLSIIPMISKSH---HPRAIEAATKYFLVQAAASTLVLFSST----VNAQHTGQWDIT 87
Cdd:PRK02504 121 LGGMFLSGATELVMIFISLE--TLSIASYLLTGYmkrDPRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIA 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 88 Q-LTYPP------ACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTL---LLITSHSLNP----AL 153
Cdd:PRK02504 199 LaLITSPslglalALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDeqwkLL 278
|
170 180 190
....*....|....*....|....*....|....*....
gi 350430931 154 LTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMV 192
Cdd:PRK02504 279 FTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMI 317
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
12-213 |
3.24e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 58.02 E-value: 3.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 12 SILLGTMV-TITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSS---------------- 74
Cdd:PRK06458 115 QLFLFTMLlALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvmgdgem 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 75 ----TVNAQHTGQWDITQLTYppACVLLTTAIAIKLGLTPFHFWFPEV-LQGSSLTTAMLlsTAMKLPPTTLLLITSHSL 149
Cdd:PRK06458 195 ailwTELLKHASLLDPTLMKL--AFVFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALL--SGVLLNVALYAVLRYYIL 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 350430931 150 NPA---------LLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTS 213
Cdd:PRK06458 271 IDAaigsdfpgrLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHS 343
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-194 |
9.56e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 56.36 E-value: 9.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLVLFS----STVNAQHTGQWDITQLTYPPACVLLTT--------AI 102
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 103 AIKLGLTPFHFWFPEVLQ-----GSSLTTAMLLSTA------MKLPpttLLLITSHSLNPaLLTTMSIMSIALGGWMGLN 171
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVqaptaGSVLLAGILLKMGaygllrFSLP---LFPDASHEFAP-IIITLGVIAIIYGALVALA 297
|
170 180
....*....|....*....|...
gi 350430931 172 QTQIRKIMAFSSISHLGWMMVTI 194
Cdd:PRK05846 298 QTDIKKLIAYSSISHMGFVTLGI 320
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-219 |
2.45e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 55.15 E-value: 2.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 13 ILLGTMVTITSNHWAMAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAA------STLVLFSSTVNAQHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 87 TQLT-----YPPACVLLT-----TAIAIKLGLTPFHFWFPEV-LQGSSLTTAMLLSTAMKLPPTTLLLITS-------HS 148
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 350430931 149 LNPALLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYTLMTSSIFLTL 219
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGL 341
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-238 |
1.29e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.51 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 96 VLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLLLITSHSL--NPA---LLTTMSIMSIALGGWMGL 170
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAV 291
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 350430931 171 NQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYT----LMTSSIFLTL----HTTNTLKLSTLMTSWTKTP 238
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMP 367
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-194 |
1.33e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 53.02 E-value: 1.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 50 PRAIEAATKYFLVQAAASTLVLFSSTVNA-QHTGQWDITQLTYPPACVLLTT--------AIAIKLGLTPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 120 QGSSLTTAMLLSTAMKLPPTTLLLI-------TSHSLNPaLLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMV 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
..
gi 350430931 193 TI 194
Cdd:TIGR01972 311 GI 312
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
1.55e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 49.64 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 55 AATKYFLVQAAASTLVLFSSTVNAQHTGQ--WDITQLT---YPPACVLLT-----TAIAIKLGLTPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 350430931 125 TTAMLLS-TAMKLPPTTL------LLITSHSLNPALLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTI 194
Cdd:PRK12561 218 PVSMILAgVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.69e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 49.71 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 33 LEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLVLFSStvnAQHTGQWDITQLTYPP-------------ACVLL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAvkmsenptvvakiALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 99 TTAIAIKLGLTPFHFWFPEVLQG--SSLTTAMLLSTAMKLPPTTLLLITSHSLNPALLTTMSIMSI------ALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWVIIIlgcltmFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 171 NQTQIRKIMAFSSISHLGWMM------VTITYNPKLTLLAFLT----------YTLMTSSIFLT----LHTTNTLKLSTL 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMASYGEIAlaggiyhivnHALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 350430931 231 MTSWTKTPMLNTTLMLTLLSLSGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
79-224 |
1.78e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.92 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 79 QHTGQWDITQL-TYPPACVLLTTAIAI-------KLGLTPFHFWFPEVLQGSSLTTAMLLSTAM---------KLPPTtl 141
Cdd:PRK12644 182 QAAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG-- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 142 lLITSHSLNPALLtTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTYT----LMTSSIFL 217
Cdd:PRK12644 260 -FADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLlahaLFKAALFL 337
|
170
....*....|.
gi 350430931 218 TL----HTTNT 224
Cdd:PRK12644 338 VVgiidHSTGT 348
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-273 |
2.05e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 49.22 E-value: 2.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 34 EINTLS---IIPMISKshhpRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDI----------TQLTYPPACVLLTT 100
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFadisqglindTSTGFALIVFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 101 AIAI-KLGLTPFHFWFPE-----------VLQGS-SLTTAMLLSTAMKLPPTTLLLIT-----SHSLNPALLTTMSIMSI 162
Cdd:PRK08668 204 AFGVaKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 163 ALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYnpkLTLLAF-------LTYTLMTSSIFLT----LHTTNTLKLSTLM 231
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYILVGLGL---GTSLGFagglfhvFNHALFKGLFFLIfaavIYRTGTTKISEMG 360
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 350430931 232 TSWTKTPMLNTTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQ 273
Cdd:PRK08668 361 GLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISK 402
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-196 |
1.22e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.13 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 48 HHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDITQLTYPPACV--------LLTTAIAIKLGLT------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 114 WFPEVLQGSSLTTAMLLSTAMkLPPTTLLLITSH---SLNPA---LLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHL 187
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATM-VKAGVYLVARIHpifSGTEAwfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
....*....
gi 350430931 188 GWMMVTITY 196
Cdd:PRK12649 315 AYLMTMYGY 323
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-192 |
3.29e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 45.53 E-value: 3.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 48 HHPRAIEAATKYFLVQAA------ASTLVLFS-------STVNAQhtGQWDITQLTYPPACVLLTTAIAIKLGLTPFHFW 114
Cdd:COG1009 156 EKPSARRAARKAFLVTRVgdlgllLGILLLGAiagtlnfSELLAA--APTILSSPLLTLILLLLLLGAFGKSAQFPLHFW 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 115 FPEVLQGSSLTTAMLLSTAMKlpptTL---LLITSH---SLNPALLTTMSIMSIA---LGGWMGLNQTQIRKIMAFSSIS 185
Cdd:COG1009 234 LPDAMEGPTPVSALLHAATMV----KAgvyLLARLSplfALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTVS 309
|
....*..
gi 350430931 186 HLGWMMV 192
Cdd:COG1009 310 QLGYMFL 316
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
3.13e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 42.41 E-value: 3.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDITQL-----------TYPPACVLLTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptnrAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 102 IAIKLGLTPFHFWFPEVLQGSSLTTAMLLS-TAMKLPPTTL-----------LLITSHSLNPALLTtMSIMSIALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIYLIirivydvfkanFVFTTLPFNNVFMI-LAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 170 LNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLLAFLTY----TLMTSSIFLTL----HTTNTLKLSTLMTSWTKTPMLN 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSgsisYHFGTTKLEDCLNLWKSMPKIT 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 350430931 242 TTLMLTLLSLSGLPPLTGFLPKWLIMQELIEQETTTTTTIISMLSLLGLFFYLRL 296
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-194 |
7.13e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 41.25 E-value: 7.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 59 YFLVQAAASTLVLFSSTVNA-QHTGQWDITQLTYPPAC-----VLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 350430931 133 AM-KLPPTTLLLITSHSLNP-----ALLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTI 194
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGI 313
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-219 |
9.34e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 9.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 101 AIAIKLGLTPFHFWFPEV-----LQGSSLTTAMLLST---AMKLPPTTLLLITSHSLNPALLtTMSIMSIALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLggyGLVRLSWPILPLGAQNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 350430931 173 TQIRKIMAFSSISHLGWMMVTITYNPKLTLlafltytlmTSSIFLTL 219
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGL---------TGSIFIML 355
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
78-206 |
1.15e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 40.66 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 78 AQHTGQWDITQ--LTYPPACVLL---TTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPpTTLLLITSHSL--- 149
Cdd:MTH00066 188 AMNTNSWELQQifLLNDNSTLPLlglILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVA-GIFLLIRFHPLlen 266
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 150 NPALLTT---MSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYNpkLTLLAFL 206
Cdd:MTH00066 267 NQTALTIclcLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLN--QPQLAFF 324
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-204 |
1.25e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.45 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 55 AATKYFLVQAAASTLVL--FSSTVNAQHTGQWDITQL---TYPPACVLLTTA-----IAIKLGLTPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILvsFLGLVWLSGASSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 124 LTTAMLLSTAMKLPPTTLL------LITSHSLNPALLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTITYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
....*..
gi 350430931 198 PKLTLLA 204
Cdd:PRK06473 318 TPLSILA 324
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-272 |
1.84e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 39.94 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQWDITQLTY--PPACVLLTTAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 111 FHFWFPEVLQGSSLTTAMLLSTAMK----LPPTTLLLITSHSLNPalLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVkagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 187 LGWMMVTitynPKLTLLAFLTYTLMTSSIFL---TLHTTNTLKL-STLMTSWTKTPMLNTTLMLTLLSlsglpPLTGFLP 262
Cdd:PRK07234 281 LGFILAA----PLVGGLYALAHGLVKSTLFLcagALPSRNFTELiSQMLGIGKWIPLTMASFSIAGFP-----LLAGFVS 351
|
250
....*....|
gi 350430931 263 KWLIMQELIE 272
Cdd:PRK07234 352 KVLTLKNLLP 361
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-194 |
2.96e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.30 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 10 TMSILLGTMVTITSNHWAM---AWAGLEI---NTLSIIPmisksHHPRAIEAATKYFLVQAAASTLVLFSSTVNAQHTGQ 83
Cdd:PRK08168 106 LAGVLAAVHLLVLSDHLLVliaAWAAISLalhRLLCFYP-----DRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGS 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 84 WDITQL-----TYPP------ACVLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAMKLPPTTLL----LITSHS 148
Cdd:PRK08168 181 LSLSALwahlaAQGAspslqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLIrfapLLEQAP 260
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 350430931 149 LNPALLTTMSIMSIALGGWMGLNQTQIRKIMAFSSISHLGWMMVTI 194
Cdd:PRK08168 261 PARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLEC 306
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-203 |
4.39e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 38.92 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350430931 96 VLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTAMLLSTAM-KLPPTTLLLI-------TSHSLNPALLTTMSImSIALGGW 167
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLLRFglqlfpqTWSLVAPGLAIIGTI-SVIYGAL 287
|
90 100 110
....*....|....*....|....*....|....*.
gi 350430931 168 MGLNQTQIRKIMAFSSISHLGWMMVTITYNPKLTLL 203
Cdd:PRK07363 288 SAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLL 323
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
170-206 |
8.24e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 37.89 E-value: 8.24e-03
10 20 30
....*....|....*....|....*....|....*...
gi 350430931 170 LNQTQIRKIMAFSSISHLGWMMVTITYN-PKltlLAFL 206
Cdd:MTH00137 298 LTQNDIKKIVAFSTSSQLGLMMVTIGLNqPQ---LAFL 332
|
|
|