|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-339 |
1.15e-95 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 287.10 E-value: 1.15e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 1 MNNNSTKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQM 80
Cdd:MTH00160 1 MMMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 81 eylMSWESEMVPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQlSNFIFTIVILSIII 160
Cdd:MTH00160 81 ---NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLIN-NNFIIIIIILSAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 161 GAMGGLNQTSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTASNMKTEIKFMM 240
Cdd:MTH00160 157 GAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 241 FLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISFSALILSYTENSWSMNAKNKSFKFTLP 320
Cdd:MTH00160 237 FLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLILN 316
|
330
....*....|....*....
gi 383215307 321 ITVMVSTTGLMLTSTLIFM 339
Cdd:MTH00160 317 FLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
6-340 |
2.76e-63 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 204.67 E-value: 2.76e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 6 TKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSIlLIQMEYLMS 85
Cdd:MTH00112 5 AKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSS-TTNAWNTGQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 86 WE----SEMVPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQLSNF--IFTIVILSII 159
Cdd:MTH00112 84 WDitqlTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPtlLLTLAILSTL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 160 IGAMGGLNQTSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTASNMKTEIKFM 239
Cdd:MTH00112 164 IGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTT 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 240 MFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISF-SALILSYTENSWSMN-AKNKSFKF 317
Cdd:MTH00112 244 LMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYiSTITLPPNTTNMMMKwRTKPKKNT 323
|
330 340
....*....|....*....|...
gi 383215307 318 TLPITVMVSTTGLMLTSTLIFML 340
Cdd:MTH00112 324 LTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
3-340 |
5.60e-62 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 201.31 E-value: 5.60e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 3 NNSTKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILlIQMEY 82
Cdd:MTH00041 2 NRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGAL-IQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 83 LMSW----ESEMVPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQL--SNFIFTIVIL 156
Cdd:MTH00041 81 SGSWsingPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLlnSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 157 SIIIGAMGGLNQTSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTASNMKTEI 236
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 237 KFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISFSALILSYTENS-----WSMNAK 311
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSislfsWRNSGN 320
|
330 340
....*....|....*....|....*....
gi 383215307 312 NKSFKFTLPITVMVSTTGLMLTSTLIFML 340
Cdd:MTH00041 321 ITVYGVILSILSSISILGLLLIPLFLSFL 349
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
8-339 |
1.07e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 195.45 E-value: 1.07e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 8 LLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQM---EYLM 84
Cdd:MTH00105 7 IIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMysgQWTI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 85 SWESEMVPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILsYCIQLS---NFIFTIVILSIIIG 161
Cdd:MTH00105 87 TKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSIL-YQISPSinpNLLLTLAILSILIG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 162 AMGGLNQTSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTASNMKTEIKFMMF 241
Cdd:MTH00105 166 GWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLIL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 242 LSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISFS-ALILSYTENSWSMNAKNKSFK--FT 318
Cdd:MTH00105 246 LTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYStSLTMFPSTNNMKMKWQFENTKpmTL 325
|
330 340
....*....|....*....|.
gi 383215307 319 LPITVMVSTTGLMLTSTLIFM 339
Cdd:MTH00105 326 LPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
10-340 |
1.80e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 192.06 E-value: 1.80e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 10 FLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILL---IQMEYLMSW 86
Cdd:MTH00070 9 LLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTInawFTGEWTIMN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 87 ESEMVPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQL--SNFIFTIVILSIIIGAMG 164
Cdd:MTH00070 89 MQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLlnSNLLIIMGLLSTLIGGWG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 165 GLNQTSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTaSNMKTEIKF-MMFLS 243
Cdd:MTH00070 169 GLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSS-SWSKNPTLTsMMMLT 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 244 LLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISFS-ALILS-YTENSWSMNAKNKSFKFTLPI 321
Cdd:MTH00070 248 LLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAmSLTTSpNTSNSKLYWRFKNKTNNLLSL 327
|
330
....*....|....*....
gi 383215307 322 TVMVSTTGLMLTSTLIFML 340
Cdd:MTH00070 328 TIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
6-340 |
9.68e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 179.78 E-value: 9.68e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 6 TKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQMEYLMS 85
Cdd:MTH00200 5 ILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 86 WESEMV---PSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILS--YCIQLSNFIFTIVILSIII 160
Cdd:MTH00200 85 GISEMLgplSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIqlAPALNSNILLLLGLLSVLV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 161 GAMGGLNQTSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTASNMKTEIKFMM 240
Cdd:MTH00200 165 GGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 241 FLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISF-SALILSYTENSWSMNAKNKSFKFTL 319
Cdd:MTH00200 245 GLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYlTLLTLSPNQINMMSSWRTKSNSNLL 324
|
330 340
....*....|....*....|..
gi 383215307 320 -PITVMVSTTGLMLTSTLIFML 340
Cdd:MTH00200 325 vGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
9-308 |
2.12e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 178.33 E-value: 2.12e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 9 LFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQMEYLMSWES 88
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 89 emvpSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQLSNFIFTIVILSIIIGAMGGLNQ 168
Cdd:MTH00197 82 ----VVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSVLSSLIGGIGGMNQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 169 TSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTASNMKTEIKFMMFLSLLSIG 248
Cdd:MTH00197 158 SNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLG 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 249 GLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISFSALILSYTENSWSM 308
Cdd:MTH00197 238 GLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLM 297
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
7-338 |
2.56e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 178.16 E-value: 2.56e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 7 KLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSIlLIQMEYLMSW 86
Cdd:MTH00144 6 NLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGS-LIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 87 ESEMVpsmlISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQLSNFIFTIVILSI---IIGAM 163
Cdd:MTH00144 85 FSMSL----LLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVlsaLVGSI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 164 GGLNQTSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTASNMKTEIKFMMFLs 243
Cdd:MTH00144 161 GGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIISL- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 244 LLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISFSALIlsytenSWSMNAKNKSFKFTLPITV 323
Cdd:MTH00144 240 LLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL------SSSKSKKSNSSKVLNSSII 313
|
330
....*....|....*
gi 383215307 324 MVSTTGLMLTSTLIF 338
Cdd:MTH00144 314 SLNLLGGLLFLLLYL 328
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
9-332 |
3.46e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 178.46 E-value: 3.46e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 9 LFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILL---IQMEYLMS 85
Cdd:MTH00135 8 ILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTnawLTGQWDIQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 86 WESEMVPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMmILSYCIQLSN--FIFTIVILSIIIGAM 163
Cdd:MTH00135 88 QMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNptLLITLGLTSTLVGGW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 164 GGLNQTSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTASNMKTEIKFMMFLS 243
Cdd:MTH00135 167 GGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLI 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 244 LLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISFS-ALILSYTENSWSMNAKNKSFKFTLPIT 322
Cdd:MTH00135 247 LLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAmTLTISPNTLNGTTPWRLPSTQLTLPLA 326
|
330
....*....|
gi 383215307 323 VMVSTTGLML 332
Cdd:MTH00135 327 ISTTATLMLL 336
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
6-302 |
3.85e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 167.65 E-value: 3.85e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 6 TKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQMEYLMS 85
Cdd:MTH00011 7 TMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 86 wesEMVPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYC--IQLSNFIFTIVILSIIIGAM 163
Cdd:MTH00011 87 ---KNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFtsHNILPMMTSMAAMSALAGGL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 164 GGLNQTSLRHLLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFKQMNLFLLNQIYTASNMKTEIKFMMFLS 243
Cdd:MTH00011 164 GGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIM 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 383215307 244 LLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRISFSALILSYT 302
Cdd:MTH00011 244 LLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPT 302
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
24-282 |
3.58e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.47 E-value: 3.58e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 24 SNSWFGVWMGLEINLLSFIPMLTNNKNSMI-NESSIKYFIVQAMASTMLLFSILLI--------------QMEYLMSWES 88
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRsSEAGMKYFLLTLLGSSILLFGISLMynytgtlsfdelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 89 EMVPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVL-MTWQKIAPMMIL-------SYCIQLSNFIFTIVILSIII 160
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIrrsllylPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 161 GAMGGLNQTSLRHLLAYSSISHLGWMISSMISSENI----WEIYFVIYSTLSLILVLLF-----KQMNLFLLNQIYTASN 231
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAgsviyRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 383215307 232 MKTEIKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLT 282
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-292 |
1.80e-24 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 103.27 E-value: 1.80e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 8 LLFLSTLmmGTILSISSNSWFGVWMGLEINLLSF---IPMLTNNKNSmiNESSIKYFIVQAMASTMLLF----------S 74
Cdd:COG1007 107 LLLFATL--GMMLMASANDLLTLFLGLELLSLSLyvlVAFRRDDRRS--SEAALKYFLLGALSSGFLLYgisllygatgS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 75 ILLIQMEYLMSWESEMVPSMLISSSLLL-----KIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMIL--------- 140
Cdd:COG1007 183 LNLAGIAAALAAGGANSPLLLLGLVLVLaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafp 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 141 SYCIQLSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMISSMIS-SENIWE---IYFVIYSTlslilvllfk 216
Cdd:COG1007 263 GLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAgTPLGVSaalFYLLAYLF---------- 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 217 qMNL---FLLNQIYTASNMKTEIK-------------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVM 280
Cdd:COG1007 333 -MNLgafAVILLLSRKGGEAEEIEdlaglarrspllaLAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVL 411
|
330
....*....|..
gi 383215307 281 LTMITLYYYLRI 292
Cdd:COG1007 412 NSVISAYYYLRV 423
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-292 |
3.91e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 101.26 E-value: 3.91e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 16 MGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMIN-ESSIKYFIVQAMASTMLLFSILLI--------------QM 80
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSaEAGLKYFVLGALSSGLFLFGCALLcgttgglhlsyinlVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 81 EYLMSWESEMVPS--MLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQLSNFIFTIVILSI 158
Cdd:MTH00196 84 NSGQSFSSVSVPIgyLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGGLFSL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 159 IIGAMGGLNQTSLRHLLAYSSISHLGWMISSM----ISSENIWEIYFVIY--STLSLILVLLFKQMNLFLLNQIYTASNM 232
Cdd:MTH00196 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYiiMSICVFSIILALNVYKNLIIEFSGLSRR 243
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 233 KTEIKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRI 292
Cdd:MTH00196 244 LPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
16-292 |
7.40e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 98.55 E-value: 7.40e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 16 MGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMIN-ESSIKYFIVQAMASTMLLFSILLI-------QMEYLMSWE 87
Cdd:MTH00199 108 LGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYStEAGLKYFVLGAVSSGLFLFGCALLygltgetSIQGINSIL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 88 SEMVPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQLSNFIFTIVILSIIIGAMGGLN 167
Cdd:MTH00199 188 TGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVLSIIYGAIGALN 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 168 QTSLRHLLAYSSISHLGWMISSM----ISSENIWEIYFVIYSTLSLILVLLFKQMNLF--LLNQIYTASNMKTEIKFMMF 241
Cdd:MTH00199 268 QTKIKRLLAYSGIGHMGFILFGVaigsFESIQASLIYMIIYVIMSICSFSIILSLKLTkgLIVEVSGLSRKNPVIALTLA 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 383215307 242 LSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRI 292
Cdd:MTH00199 348 LTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-292 |
1.93e-21 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 94.89 E-value: 1.93e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 8 LLFLSTLmmGTILSISSNSWFGVWMGLEI-NLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIqmeYLMSW 86
Cdd:PRK05777 108 LVLFALL--GMMVMVSANDLLTLFLGLELlSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLL---YGATG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 87 ESEMVPSMLISSSLLL------------------KIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMIL-------- 140
Cdd:PRK05777 183 SLSFAGIAKALADGSGnsllllfglvfllvglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLlrllvvaf 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 141 -SYCIQLSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWM-----ISSMISSENIWeIYFVIYSTLSL----I 210
Cdd:PRK05777 263 gGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvglaAGTAEGYSAVL-FYLLAYLFMTLgafgV 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 211 LVLLFKQM----NLFLLNQIYTASNMKTeikFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITL 286
Cdd:PRK05777 342 ISLLRRKGgeaeSISDFAGLSKRSPLLA---AVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGA 418
|
....*.
gi 383215307 287 YYYLRI 292
Cdd:PRK05777 419 FYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-337 |
5.91e-19 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 87.31 E-value: 5.91e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 8 LLFLSTLmmGTILSISSNSWFGVWMGLEI-NLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIqmeYLMSW 86
Cdd:TIGR01770 107 LLLFALL--GIFLLVSSNDLLSIYLGLELqSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLI---YGFTG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 87 ESEMVPSMLISSSLLL------------------KIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIA---PMMILSYCIQ 145
Cdd:TIGR01770 182 SLNFEDLLLFLSNGMLnisllllgivlilvgllfKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifaVFLRLFLYIL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 146 ------LSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGW-MISSMISSENIWE---IYFVIYSTLSLILVLLF 215
Cdd:TIGR01770 262 fgfseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIKavlFYIFIYALMSLGAFGVL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 216 KQMNLFLLNQIYTASNMKTEIK------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYY 289
Cdd:TIGR01770 342 SLLRSYKDEWIEYISDFAGLFKtnpilaILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYY 421
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 383215307 290 LRIsfSALILSYTENSWSMNAK-NKSFKFTLPITVMVSTTGLMLTSTLI 337
Cdd:TIGR01770 422 LRV--VKVMYFDKPERRIPSNPqSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
10-292 |
8.20e-16 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 77.88 E-value: 8.20e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 10 FLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQ-------MEY 82
Cdd:COG0651 112 LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYgatgtlnMAD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 83 LMSWESEMVPSMLISSSLL------LKIGAAPFHFWFPEVMGA-----SEWFNCLVLmtwqKIAPMMIL---------SY 142
Cdd:COG0651 192 LAARLAELDPGLLLAAFALllvgfgIKAALFPLHFWLPDAYPAapspvSALLSGLLT----KVGVYAILrvltllfgaDP 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 143 CIQLSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMISSM-ISSENIWE--IYFVIYSTLSLILvllfkqmn 219
Cdd:COG0651 268 ALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLgLGTPLGLAgaLFHLLNHALAKAL-------- 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 220 LFLLNQIYTASNMKTEIK-------------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITL 286
Cdd:COG0651 340 LFLAAGAIERATGTRDLDklgglgkrmpltaAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTL 419
|
....*.
gi 383215307 287 YYYLRI 292
Cdd:COG0651 420 AYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-292 |
1.04e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 77.98 E-value: 1.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 16 MGTILSISSNSWFGVWMGLEINLLSFIPM---------LTNNKNSMINESSIKYFIVQAMASTMLLFSILL--------- 77
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILagegsqpgsHFPSPGNTPPESGLKYWILGAMSSGFYLFGCALyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 78 ----IQMEYLMSWESEM----VPSMLISSSLLLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQLSNF 149
Cdd:MTH00198 279 mlgtILSATLETTNIELrqgsLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVITSKL 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 150 IFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMI-----SSMISSENIWeIYFVIYSTLSLILVLLFKQMNLFllN 224
Cdd:MTH00198 359 LLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILigvsaGTYESLQASW-TYAVTYLVSALASFTVICTLEEF--G 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 225 QIYTASNMKTE-----------------------IKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAI---- 277
Cdd:MTH00198 436 TRTPTSRQRDGsfgnynlvrrlvdltilsrgqpyIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIyylv 515
|
330
....*....|....*...
gi 383215307 278 ---MVMLTMITLYYYLRI 292
Cdd:MTH00198 516 alfAIICTCISAFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
103-328 |
2.71e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.17 E-value: 2.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 103 KIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMM--------ILSYCIQLSNFIFTIV-ILSIIIGAMGGLNQTSLRH 173
Cdd:CHL00049 227 KLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASAlatrifdiPFYFSSNEWHLLLEILaILSMILGNLIAITQTSMKR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 174 LLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLL--FKQMNLFLL----NQI--YTASNMKTEI-KFMMFLSL 244
Cdd:CHL00049 307 MLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLgtFACIVLFGLrtgtDNIrdYAGLYTKDPFlALSLALCL 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 245 LSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRI------SFSALILSYTENS--WSMNAKNkSFK 316
Cdd:CHL00049 387 LSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIikllmtGRNQEITPYVRNYrrSPLRSNN-SIE 465
|
250
....*....|..
gi 383215307 317 FTLPITVMVSTT 328
Cdd:CHL00049 466 LSMIVCVIASTI 477
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
103-337 |
2.28e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 58.52 E-value: 2.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 103 KIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIA----PMMILSYCIQLSN----FIFTIV-ILSIIIGAMGGLNQTSLRH 173
Cdd:PRK02504 223 KISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDeqwkLLFTALaILSMVLGNVVALAQTSMKR 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 174 LLAYSSISHLGW-MISSMISSENiweiyfvIYSTLSL-ILVLLFkqMNL-----FLLNQIYTASNMKTE----------I 236
Cdd:PRK02504 303 MLAYSSIGQAGFvMIGLVAGTEA-------GYASMVFyLLAYLF--MNLgafacVILFSLRTGTDQISDyaglyqkdplL 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 237 KFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRI----------SFSALILSYTENSW 306
Cdd:PRK02504 374 TLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVikmmvvkepqEMSDVVKNYPEINW 453
|
250 260 270
....*....|....*....|....*....|.
gi 383215307 307 SMNAKnKSFKFTLPITVMVSTTGLMLTSTLI 337
Cdd:PRK02504 454 NLPGM-RPLRVGLVLCVIATALAGILSNPLF 483
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-296 |
1.48e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.87 E-value: 1.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 55 ESSIKYFIVQAMASTMLLFSILLI-------QMEYLMSWESE------MVPSMLISSSLLLKIGAAPFHFWFPEVMGA-- 119
Cdd:PRK08376 172 EAGIKYMFVGSLASSMVLLGIALLygqygtlNMAYLAVKMSEnptvvaKIALALFIAGLAMKSGAVPVHMWLPDAYPAap 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 120 SEWFNCLVLMTWQKIAPMMILSYCI--------QLSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMI---- 187
Cdd:PRK08376 252 SSISAMLLVIKQAGLYALARVLFSIygpainlaTVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLlglg 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 188 ------SSMISSE--------NIWEI--YFVIYSTLSLILVLLFKQMNLFLLNQIY-TASNM-KTEIKFMmfLSLLSIGG 249
Cdd:PRK08376 332 vglaalGDPAMASygeialagGIYHIvnHALYKALLFLTAGAVIYETGTRNLNELGgLARTMpKTTIAFL--IGAAAIVG 409
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 383215307 250 LPPFIGFLPKWMVMQSMMEMNmTSLMAIMVMLTMITLYYYLRISFSA 296
Cdd:PRK08376 410 LPPFNGFASKWLIYESSALFN-PILGVIAMIGSVLTLASFVKVFHTA 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
146-292 |
2.41e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 55.27 E-value: 2.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 146 LSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMIssmisseniweIYFVIYSTLSLI--LVLLFKQM----N 219
Cdd:PRK08375 270 LGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYIL-----------LGLALLTPLALAagLLHLLHHAlmkgA 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 220 LFL-LNQIYTASNMKT---------EIKFMM---FLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITL 286
Cdd:PRK08375 339 LFLaAGAIEVTYGTRRlselsglgrRMPLTAaafAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLAL 418
|
....*.
gi 383215307 287 YYYLRI 292
Cdd:PRK08375 419 LYFLRI 424
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
146-296 |
8.39e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.42 E-value: 8.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 146 LSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMISSmISSENIWEIYFVIYSTLSLILVLLFkqmnLFLLNQ 225
Cdd:PRK12663 271 LHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLG-LALGTPAGINGAIFYLVHDMVVKTA----LFLIAG 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 226 IYTASNMKTEIKFM-------------MFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLRI 292
Cdd:PRK12663 346 SLVRLTGYRSLQYLgglyrkeplfgalFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRI 425
|
....
gi 383215307 293 SFSA 296
Cdd:PRK12663 426 FFLA 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
108-298 |
9.65e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.43 E-value: 9.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 108 PFHFWFPEVMGA----SEWFNCLVLMtwqKIAPMMILSYCIQLSN------FIFTIVILSIIIGAMGGLNQTSLRHLLAY 177
Cdd:PRK12650 226 PFHFWLPEAMAAitpvSAFLHAAAVV---KAGIYLLLRFSPVFHDvavwnwLLIIVGMITALMGAVFAVQKTDLKKLTAY 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 178 SSISHLGWmISSMISSENIWEIYFVIYSTLSLIlvlLFKQmNLFLL-----NQIYT-------ASNMKTEIKF-MMFLSL 244
Cdd:PRK12650 303 STVSQLGW-IVATIGVGTPFALTAAVVHTLAHA---LFKS-SLFMLigvvdHQAGTrdirrlgSLWRRMPFTFvSVTIAA 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 383215307 245 LSIGGLPPFIGFLPKWMVMQSMME-----MNMTSLMAIMVMLTMITLYYYLRISFSALI 298
Cdd:PRK12650 378 LSMAAVPPLFGFVSKEGMLTAFLEapggnAGVVLLLVGAALGAVFTFAYSARLVLGAFV 436
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
145-292 |
1.79e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 49.58 E-value: 1.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 145 QLSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMISSMISSENI---WEIYFVIY-----STLSLILVLLFK 216
Cdd:PRK12665 271 GLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHhitvqTTLFLVVGLIER 350
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 383215307 217 QMNLFLLNQIYTASNMKTEIKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMT---SLMAIMVMLTMITLYYYLRI 292
Cdd:PRK12665 351 QAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWlawALVAGGVVTSLLTLYAVARV 429
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
53-295 |
2.14e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 2.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 53 INESSIKYFIVQAMASTMLLFSILLIQMEYLMSwesemvpsmlissslllkIGAAPFHFWFPEVMGASEWFNCLVLMTWQ 132
Cdd:PRK06277 180 LNITDIHNALLVNPTSPVIYGGLLLLIFGLLYG------------------SGLPPFHTIKSDIYAKAKPFGSALLQTFS 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 133 K---IAPMMI-------LSYCIQLSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMISSM-------ISSEN 195
Cdd:PRK06277 242 KfvlVALMLVifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLalgtplgIVAGI 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 196 IWEIYFVIY-STLSLILVLLFKQMNLFLLNQIYTASNMKTEIKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSL 274
Cdd:PRK06277 322 FHAINHVIYkSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPEL 401
|
250 260
....*....|....*....|.
gi 383215307 275 MAIMVMLTMITLYYYLRISFS 295
Cdd:PRK06277 402 AIIMIIVSIGTFVSMMKAFYL 422
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
146-295 |
2.93e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 48.81 E-value: 2.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 146 LSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGW--MISSMISSeniweiyFVIYSTLSLILVLLFKQMNLFLL 223
Cdd:PRK12667 294 LSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYifMGIGIGTQ-------LGLAAALFHIINHAIAKSLLFLA 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 224 NQIYTASNMKTEIK-------------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYL 290
Cdd:PRK12667 367 SGVFIHAAGTRDIDelaglgrkmpiasFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYF 446
|
....*
gi 383215307 291 RISFS 295
Cdd:PRK12667 447 RAWYS 451
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-305 |
4.34e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 45.19 E-value: 4.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 3 NNSTKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLI---- 78
Cdd:PRK06589 114 SSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILiytk 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 79 --QMEYLMSWESEMVPSMLISSSLLLKIGAA---PFHFWFPEVMGASEWFNCLV---------LMTWQKIAPMM----IL 140
Cdd:PRK06589 194 tgNLDFVSGGLFSKNQSIILLLMFIYGIAKTaifPVHSWLPAAMVAHYPVSALLhavivvktgLFCIYKILLYIfglsYL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 141 SYCIQLSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMI-SSMISSENIWEIYFVIYSTLSLILVLLFKQMN 219
Cdd:PRK06589 274 QRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlSAFILTPKALGAAILHLVSHSFAKICLFYSMG 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 220 LFL-------LNQIYTASNMKTEIKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSL----MAIMVMLTMITLYY 288
Cdd:PRK06589 354 SIYslkkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLsiivMLVVIASSILSALY 433
|
330
....*....|....*..
gi 383215307 289 YLRISFSALILSYTENS 305
Cdd:PRK06589 434 LLKILSSIYKPSLSENS 450
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
14-325 |
1.23e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 42.94 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 14 LMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINessikYFIVQAMASTMLLFSILLIQMEYLMswesemvps 93
Cdd:MTH00091 3 LSLLNFMSLNIFVWWSVFLLMTLLFVFLNKGMGSYSSLFNY-----FVLQESLGLLFLLFSFGYFQFLILM--------- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 94 mlisssllLKIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQLSNFIFTIVILSIIIGAMggLNQTSLRH 173
Cdd:MTH00091 69 --------MKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQM--FLLKSYKN 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 174 LLAYSSISHLGWMISSMISSENIWEIYFVIYSTLSLILVLLFkqmnlfllnqiytasNMKTEIKFMMFLSLLSIGGLPPF 253
Cdd:MTH00091 139 LLILSSTESFNWLILSFFFSFFNVFFLFFYYFLLMLFLIPKF---------------NNVNKLNFVSWETLLVFMNLPFS 203
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 383215307 254 IGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYyylrISFSALILSYTENSWSMNAKNKSFKFTLPITVMV 325
Cdd:MTH00091 204 VTFFVKIFSLSEILKVLGFFLLFLLFLMFLSVLS----LSFWLVNLSTKLFLMLFKYNKGFFFFFLPLMLLS 271
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-292 |
2.45e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 42.68 E-value: 2.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 1 MNNNSTKLLFLSTLMMGTILSISSNSWFGVWMGLEINLL-SFIPMLTNNKNSmiNESSIKYFIVQAMASTMLLFSILLI- 78
Cdd:PRK08668 94 TKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFsSFMMVPMGKKES--RKASLKYFVLSAIGAYAMLYAIFLIy 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 79 -------------QMEYLMSWESEMVPSMLISSSLLLKIGAAPFHFWFPEV------------------MGASEWFNCLV 127
Cdd:PRK08668 172 aktgtfdfadisqGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAyseapqsfsavlsgqlskLGAYGFLLVLY 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 128 LMTWQKIAPMMILSYCIQLSNFIF-TIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWM---ISSMISSENIWEIYFVI 203
Cdd:PRK08668 252 VLPGTKLFSEFGTYRGVPLFNYILaWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYIlvgLGLGTSLGFAGGLFHVF 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 204 YSTlslilvlLFKQMnLFLLNQIYTASNMKTEIK-------------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMN 270
Cdd:PRK08668 332 NHA-------LFKGL-FFLIFAAVIYRTGTTKISemggliekmpftfAMYLVAIISLAGIPPMSGFASKWLIFEALISKG 403
|
330 340
....*....|....*....|..
gi 383215307 271 MTSLMAIMVMLTMITLYYYLRI 292
Cdd:PRK08668 404 MPITAFMAFFGSIGSFLYVFRP 425
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-263 |
3.79e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 42.25 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 103 KIGAAPFHFWFPEVMGASEWFNCLVLMTWQKIAPMMILSYCIQLSNFIFTIV----ILSIIIGAMGGLNQTSLRHLLAYS 178
Cdd:PRK07234 197 KGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVrifgVGTALLGVLFALLEKDLKRMLAFS 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 179 SISHLGWMISSMISSEniweiyfvIYStLSLILVLLFkqmnLFLLNQIYTASNMKTEIKFM------MFLSL--LSIGGL 250
Cdd:PRK07234 277 TISQLGFILAAPLVGG--------LYA-LAHGLVKST----LFLCAGALPSRNFTELISQMlgigkwIPLTMasFSIAGF 343
|
170
....*....|...
gi 383215307 251 PPFIGFLPKWMVM 263
Cdd:PRK07234 344 PLLAGFVSKVLTL 356
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
108-325 |
1.46e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.51 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 108 PFHFWFPEVMGASEWFNCLV---LMTWQKIAPMMILSYCIQLSNFIFTIV----ILSIIIGAMGGLNQTSLRHLLAYSSI 180
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLhsaTMVKAGIFLLFRFTPLLGLSNMYIYIVtfvgLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 181 SHLGwMISSMI---------SSENIWEIYFVIystlslILVLLFKQMN-------LFL----------LNQIYTASNMKT 234
Cdd:PRK12646 308 SQLG-MIMAMVgigggyaqhQQDAIASIYVFV------LFAALFHLMNhaifkcaLFMgvgiidheagTRDIRILSGMRQ 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 235 EIKFM---MFLSLLSIGGLPPFIGFLPKWMVMQSMMEMN---------MTSLMAIMVMLTMITLYYYLRISFSALILSYT 302
Cdd:PRK12646 381 LFPKMnlvMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslisMIIIVFIGVIASIFTFTYALYMVKEVFWGKYD 460
|
250 260
....*....|....*....|...
gi 383215307 303 ENSWSMNAKNKSFKFTLPITVMV 325
Cdd:PRK12646 461 SKVFTKKNIHEPWLFSLPSLILM 483
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
108-187 |
3.16e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 39.15 E-value: 3.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 108 PFHFWFPEVMGASEWFNCLVLM-TWQKIAPMMILSYCIQL--------SNFIFTIVILSIIIGAMGGLNQTSLRHLLAYS 178
Cdd:TIGR01972 221 PLHTWLPDAHVEAPTAGSVILAgVLLKMGTYGFLRFNLPLfpdaslyfAPVLAALGVIAIIYGALIALAQTDIKRLIAYS 300
|
....*....
gi 383215307 179 SISHLGWMI 187
Cdd:TIGR01972 301 SISHMGFVL 309
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
145-184 |
3.21e-03 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 39.29 E-value: 3.21e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 383215307 145 QLSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLG 184
Cdd:COG1008 273 YFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
8-292 |
4.09e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.98 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 8 LLFLsTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLI-------QM 80
Cdd:PRK08377 112 MLFL-LLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIygatgtlNM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 81 EYLMSWESEMVPSMLISSSLLLKIGAA------PFHFWFPEVMGA-----SEWFNCLVLMTwqKIAPMMILSYCIQLSN- 148
Cdd:PRK08377 191 AHIAQLAGTIDPTVAQVGLALLIFGLAveaelfPLNAWAPDAYQAaphpiTVMFSAFVVKA--GLYAMARILYLMQNANg 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 149 ------FIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMISSM-ISSENIWEIYFVIYSTLSLILVLLFKQMNLF 221
Cdd:PRK08377 269 wssvlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALaLGTQAGVDAGVFHMINHAIVKALLFLAVGYV 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 222 llnqIYTASNMKTE-----------IKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYL 290
Cdd:PRK08377 349 ----GITLGGTEIEkfeglgkrmplTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYF 424
|
..
gi 383215307 291 RI 292
Cdd:PRK08377 425 RL 426
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
148-292 |
5.10e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 38.39 E-value: 5.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 148 NFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWM---ISSMISSENIWEIYFVIYStlslilvLLFKQMnLFLLN 224
Cdd:PRK07691 276 YLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIlvgVAMMTESGMIGAIYYLIHD-------MIVKAA-LFLLI 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215307 225 QIYTASNMKTEIK-------------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTSLMAIMVMLTMITLYYYLR 291
Cdd:PRK07691 348 GIMIKITGTTDLKkmgglikrypvlgWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIK 427
|
.
gi 383215307 292 I 292
Cdd:PRK07691 428 I 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
145-187 |
7.94e-03 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 37.87 E-value: 7.94e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 383215307 145 QLSNFIFTIVILSIIIGAMGGLNQTSLRHLLAYSSISHLGWMI 187
Cdd:PRK05846 275 EFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVT 317
|
|
|