|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.54e-156 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 442.34 E-value: 1.54e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 161 SAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTWSKTPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAYCATITISPSSTNHIKHWQTSKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|...
gi 383875084 321 INMPTSILTALSITLLPLSPTIL 343
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMIL 343
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.70e-130 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 376.45 E-value: 1.70e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSlNPTLLSMMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 161 SAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTWSKTPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAYCATITISPSSTNHIKHWQT-SK 319
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLpST 319
|
330 340
....*....|....*....|....
gi 383875084 320 SINMPTSILTALSITLLPLSPTIL 343
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAIL 343
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
9.89e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 364.24 E-value: 9.89e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 161 SAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTWSKTPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAYCATITISPSSTNHIKHWQTSKS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|...
gi 383875084 321 INMPTSILTALSITLLPLSPTIL 343
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTIL 343
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
2.82e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 329.88 E-value: 2.82e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 161 SAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTWSKTPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAYCATITISPSSTNHIKHWQTSKS 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....
gi 383875084 321 INMP-TSILTALSITLLPLSPTIL 343
Cdd:MTH00105 321 KPMTlLPTLIILSTMLLPLTPMLS 344
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.79e-92 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 279.55 E-value: 1.79e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 161 SAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTWSKTPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAYCATITISPSSTNHIKHWQTSKS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|...
gi 383875084 321 INMPTSILTALSITLLPLSPTIL 343
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLL 343
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
2.58e-76 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 238.29 E-value: 2.58e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 161 SAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTWSKTPTL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAYCATITISPSSTNHIKHWQTSKS 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 383875084 321 INMPTSILTALSITLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
3.05e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 188.49 E-value: 3.05e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 81 TGqwditqLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTspsLNPTLLSMMAIA 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 161 SAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTWSKTPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 241 TATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAYCATITISPSSTNHIKhwQTSKS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLK--KKKNK 310
|
330 340
....*....|....*....|...
gi 383875084 321 INMPTSILTALSITLLPLSPTIL 343
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-336 |
2.17e-48 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 165.44 E-value: 2.17e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 5 AKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 85 DItqlnhpMSCMLLttAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNP-TLLSMMAIASAA 163
Cdd:MTH00144 85 FS------MSLLLL--GLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 164 LGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFlTLTTTNTLKLATLMTTWSKTPTLTAT 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLF-FSLWSGDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAYCATItispSSTNHIKHWqTSKSINM 323
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL----SSSKSKKSN-SSKVLNS 310
|
330
....*....|...
gi 383875084 324 PTSILTALSITLL 336
Cdd:MTH00144 311 SIISLNLLGGLLF 323
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-337 |
3.25e-43 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 151.86 E-value: 3.25e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 7 LIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSsMTNAWFTgqwdI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLG-MTMMWSF----P 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 87 TQLNHPMSCMLLTtAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIASAALGG 166
Cdd:MTH00011 84 SLLKNITALMLLV-SLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 167 WMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTWSKTPTLTATLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 247 TLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAYcATITISPSSTNhIKHWQTSKSINMPTS 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS-LKSAPYEPKTKILIS 320
|
330
....*....|.
gi 383875084 327 ILTaLSITLLP 337
Cdd:MTH00011 321 MCT-LSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-298 |
1.43e-39 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 142.12 E-value: 1.43e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 8 IFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMtnAWFTGQWDIT 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLYLSL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 88 qlnhpMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPtiLLLLTSPSLNPTLLSMMAIASAALGGW 167
Cdd:MTH00197 80 -----LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 168 MGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTWSKTPTLTATLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 383875084 248 LLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
5.73e-29 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 116.37 E-value: 5.73e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 14 LLGTTITISSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLF-SSMTNAwFTGQWDITQLNH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 92 PMS------------CMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMK---FPPTILLLLTS-PSLNP---T 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAALLRLLVEAfPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 153 LLSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTL--ITFYL--YSLTTTAIFLTLTTTNTLKLA 228
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLSRKGGE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 383875084 229 TLMTT-----WSKTPTLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAY 298
Cdd:COG1007 351 AEEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
2.54e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 102.98 E-value: 2.54e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 14 LLGTTITISSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQL--- 89
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIaka 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 90 ------NHPM---SCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMK---FPPTI-LLLLTSPSLNPT---L 153
Cdd:PRK05777 193 ladgsgNSLLllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 154 LSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTL--ITFYL--YSLTTTAIFLTLTTTNTLKL-A 228
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVISLLRRKGGeA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 383875084 229 TLMTTWS----KTPTLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
4.44e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 98.18 E-value: 4.44e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 13 LLLGTTITISSNHWVMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLTQAAASTLLLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 79 WFTGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFppTILLLLTSPSLNPTLLSMMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 159 IASAALGGWMGLNQTQVRKILAFSSISHLGW----MAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTT- 233
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFvlwgIEIGSFESIQASLVYLFIYIIMSICVFSIILALNVYKNLIIEFSg 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383875084 234 -WSKTPTLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRL 296
Cdd:MTH00196 240 lSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.16e-22 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 95.84 E-value: 1.16e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 23 SNHWVMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQL--------NHPM 93
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 94 SCM---LLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPT------LLSMMAIASAAL 164
Cdd:pfam00361 81 LLLlflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 165 GGWMGLNQTQVRKILAFSSISHLGWMAIIL----IYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTT-----WS 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRdygglAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 383875084 236 KTPTLTATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
1.64e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 95.01 E-value: 1.64e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 14 LLGTTITISSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQLNHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 93 ------------MSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSL-------NPTL 153
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 154 LSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTL--ITFYL--YSLTTTAIFLTLTTTNTL--KL 227
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLLRSYkdEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383875084 228 ATLMTTWSKTP----TLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAGLFktnpILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
7.61e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 90.08 E-value: 7.61e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 13 LLLGTTITISSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQLNH 91
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 92 PMSC----MLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSmmAIASAALGGW 167
Cdd:MTH00199 186 ILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 168 MGLNQTQVRKILAFSSISHLGW----MAIILIYNPKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTTW--SKTPTLT 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKGLIVEVSGlsRKNPVIA 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 383875084 242 ATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRL 296
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
1.14e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 81.06 E-value: 1.14e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 15 LGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAI---------EASTKYFLTQAAASTLLLFSSMTNAWFTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 84 ------------WDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFppTILLLLTSPSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 152 TLLSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKLTLITFYLYSL----TTTAIFLTLTTTNTLKL 227
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVtylvSALASFTVICTLEEFGT 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 228 ATLMTTWSKTPT---------------------LTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLS 286
Cdd:MTH00198 437 RTPTSRQRDGSFgnynlvrrlvdltilsrgqpyIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 383875084 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
1.89e-16 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 79.81 E-value: 1.89e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 13 LLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQLNHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 93 MS----------CMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIM---------KFPPTILLLLTSPSLNPTL 153
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtkvgvyailRVLTLLFGADPALFLGTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 154 LSMmAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAI-ILIYNPKLTLITFYLY---SLTTTAIFLTLTTTNTLKLAT 229
Cdd:COG0651 276 LVL-GLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLGLAGALFHLlnhALAKALLFLAAGAIERATGTR 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 383875084 230 LMTT----WSKTPTLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRL 296
Cdd:COG0651 355 DLDKlgglGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-287 |
4.63e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 57.41 E-value: 4.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 33 LEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFS---------SMTNAWFTGQWDITQLNHPMSCM-LLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 102 ISMKLGLVPFHFWFPEVLQG--SSLTTSLLLATIMKFPPT--ILLLLTSPSLNPT----LLSMMAIASAALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 174 QVRKILAFSSISHLGWM------AIILIYNPKLTLITFY-----LYSLTTTAIFLTLTTTNTLKLATLMTTWS------- 235
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMASYGEIalaggIYHIVNHALYKALLFLTAGAVIYETGTRNlnelggl 389
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 383875084 236 --KTPTLTATLMLTLLSLAGLPPLTGFLPKWLIIQE--LTKQDLTAAATIIALLSL 287
Cdd:PRK08376 390 arTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSVLTL 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-192 |
6.80e-08 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 53.93 E-value: 6.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 49 HPRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQW--DITQL-NHPMS---------CMLLTTAIsmKLGLVPFHFWFP 116
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELaAAPLPltaqlllflAFFIAFAV--KVPMFPFHTWLP 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 117 EVLQGSSLTTSLLLATIMK-----------FPptiLLLLTSPSLNPTLLSMmAIASAALGGWMGLNQTQVRKILAFSSIS 185
Cdd:COG1008 234 DAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
....*..
gi 383875084 186 HLGWMAI 192
Cdd:COG1008 310 HMGFVLL 316
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
2.71e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 46.87 E-value: 2.71e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 383875084 291 FFYLRLAYCATITISPSSTNHIKHWQT-SKSINMPTSILTALSITLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFnSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-333 |
9.20e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 50.39 E-value: 9.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 7 LIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHP-RAIEASTKYFLTQAAASTLLL--FSsmtnaWFTGQ 83
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFS-----WLYGL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 84 -------WDI------TQLNHPMSC----MLLTTAISMKLGLVPFHFWFPEVLQGS-----------SLTTSLLLATimk 135
Cdd:CHL00049 189 sggeielQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTPDVYEGSptpvvaflsvtSKVAASALAT--- 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 136 fppTILLLLTSPSLNP--TLLSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAIILI-------YNPKLTLITFY 206
Cdd:CHL00049 266 ---RIFDIPFYFSSNEwhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsndgYASMITYMLFY 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 207 LY-SLTTTA-IFLTLTTTNTLKLATLMTTWSKTPTLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIAL 284
Cdd:CHL00049 343 IFmNLGTFAcIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLL 422
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 383875084 285 LSLLGLFFYLRLAYCATITISPSSTNHIKHWQTSkSINMPTSILTALSI 333
Cdd:CHL00049 423 TSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRS-PLRSNNSIELSMIV 470
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-192 |
3.52e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 48.40 E-value: 3.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 50 PRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQ-WDITQL-NHPMSCMLLT-------TAISMKLGLVPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 383875084 121 GSSLTTSLLLATIMKFPPTILLLLTSPSLNP-------TLLSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
9.29e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 47.18 E-value: 9.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 33 LEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFS-SMTNAwFTGQWDI----------TQLNHPMSCMLLttA 101
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMadlagalaenPTVVTAFGFVLL--A 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 102 ISMKLGLVPFHFWFPEVLQGSSLTTSLLLA---TIMKFPPTILLLLT----SPSLNPTLLSM-MAIASAAL--GGWMGLN 171
Cdd:PRK08375 212 LALKAAVFPLHTWLPRAYPAAPPVVTALLSglvTKVAVYALIRIYFTvfggDFRFALGLGWLlAVLALLSMlvGSLAALG 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 172 QTQVRKILAFSSISHLGWMAIILIYNPKLTLI--TFYL--YSLTTTAIFLTLTTTNTLKLATLMTTWSKTP----TLTAT 243
Cdd:PRK08375 292 QDDVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAIEVTYGTRRLSELSGLGrrmpLTAAA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 383875084 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLSLLGLFFYLRLAY 298
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-190 |
2.38e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.85 E-value: 2.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 55 ASTKYFLTQAAASTLLLFSSMTNAWFTG--QWDITQLNH---PMSCMLLTTA-----ISMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRShtlPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 383875084 125 TTSLLLATIMKFPPTILLLLTSPSLNPTL-------LSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWM 190
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLRFGVGLFPEAwvylapwLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
8-194 |
4.14e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 45.14 E-value: 4.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 8 IFSMSLLlgttitISSNHWVMAWTGLEINTLAILPLISKSHH-PRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQWDI 86
Cdd:COG1009 121 MAAMLGL------VLSDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 87 TQLNH----PMSCMLLTTAISM-------KLGLVPFHFWFPEVLQGSSLTTSLLLATIMK----FpptiLLLLTSP--SL 149
Cdd:COG1009 195 SELLAaaptILSSPLLTLILLLlllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMVkagvY----LLARLSPlfAL 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 383875084 150 NPTLLSMMAI---ASAALGGWMGLNQTQVRKILAFSSISHLGWMAIIL 194
Cdd:COG1009 271 SPVWLTVVAIigaITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL 318
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-190 |
1.06e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 44.26 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 96 MLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSL--NPT---LLSMMAIASAALGGWMGL 170
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAV 291
|
90 100
....*....|....*....|
gi 383875084 171 NQTQVRKILAFSSISHLGWM 190
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWI 311
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.33e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 43.50 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 50 PRAIEASTKYFLTQAAASTLLLF---------------SSMTNAWFTGQWDITQLnhpmSCMLLTTAISMKLGLVPFHFW 114
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgssllyglsggstqlSAIALALITSPSLGLAL----ALVFVIAGIAFKISAVPFHQW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 115 FPEVLQGSSLTTSLLLATIMK---FPPTILLLLTS-PSLNP---TLLSMMAIASAALGGWMGLNQTQVRKILAFSSISHL 187
Cdd:PRK02504 233 TPDVYEGSPTPVVAFLSVGSKaagFALAIRLLVTAfPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQA 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 188 GWMAIILIYNPK--LTLITFYL--YSLTTTAIFLTLTTTNTLKLATLMTTWS----KTPTLTATLMLTLLSLAGLPPLTG 259
Cdd:PRK02504 313 GFVMIGLVAGTEagYASMVFYLlaYLFMNLGAFACVILFSLRTGTDQISDYAglyqKDPLLTLGLSLCLLSLGGIPPLAG 392
|
....
gi 383875084 260 FLPK 263
Cdd:PRK02504 393 FFGK 396
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
97-194 |
4.10e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 42.22 E-value: 4.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 97 LLTTAISmKLGLVPFHFWFPEVLQGSSLTTSLLLATIM---------KFPPTillLLTSPSLNPTLLSMmAIASAALGGW 167
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLVL-GLATMLLGGW 283
|
90 100
....*....|....*....|....*..
gi 383875084 168 MGLNQTQVRKILAFSSISHLGWMAIIL 194
Cdd:PRK12644 284 RALRQHDLKLILAYGTVSQLGFLTVLV 310
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-335 |
4.74e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 41.86 E-value: 4.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 92 PMSCMLLTTAISMKLGLVPFhFWFPEVLQGSSLTTSLLLATIMK-------FPPTILLLLTSPSLNPTLLSMMAIASAAL 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 165 GGWMGLNQTQVRKILAFSSISHLGWM-AIILIYNPK-LTLITFYLYS--LTTTAIFLTLTTTNTLKLATLMTTWS----K 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFIlLGLALGTPAgINGAIFYLVHdmVVKTALFLIAGSLVRLTGYRSLQYLGglyrK 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 237 TPTLTATLMLTLLSLAGLPPLTGFLPKWLIIQ---ELTKQDLTAAATIIALLSLLGLFFYLRLAYCATITISPSSTNHIK 313
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgalDNGAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIP 445
|
250 260
....*....|....*....|..
gi 383875084 314 HWQTSksinmPTSILTALSITL 335
Cdd:PRK12663 446 LYRKL-----PLSILAVVVIAM 462
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-192 |
5.96e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.56 E-value: 5.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 55 ASTKYFLTQAAASTLLLFSSMTNAWFTGQ--WDITQL---NHPMSCMLLT-----TAISMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELgakSYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 383875084 125 TTSLLLATI-MKFPPTILLLLTSPSLNPT------LLSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAI 192
Cdd:PRK12561 218 PVSMILAGVlLKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
103-194 |
1.11e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 40.71 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 103 SMKLGLvpfHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIA-----SAALGGWMGLNQTQVRK 177
Cdd:MTH00032 239 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAATVGLVQNDLKK 315
|
90
....*....|....*..
gi 383875084 178 ILAFSSISHLGWMAIIL 194
Cdd:MTH00032 316 VIAYSTCSQLGYMVLII 332
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-195 |
1.32e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 40.29 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 101 AISMKLGLVPFHFWFPEVLQGSSLTTSLLLATI-MKFPPTILLLLTSP-------SLNPTLLSmMAIASAALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSWPilplgaqNLAPAVIA-MGIVGIVYGSFATCRQ 317
|
90 100
....*....|....*....|...
gi 383875084 173 TQVRKILAFSSISHLGWMAIILI 195
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLV 340
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
52-190 |
1.41e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.39 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 52 AIEASTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQLNHPMSCMLLTTAISMKLGLV----------------PFHFWF 115
Cdd:PRK07376 171 AADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 116 PEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIA-----SAALGGWMGLNQTQVRKILAFSSISHLGWM 190
Cdd:PRK07376 251 PDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAwtgaiTAFLGASIALTQNDIKKGLAYSTISQLGYM 330
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-192 |
1.43e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.12 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 13 LLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAA------STLLLFSSMTNAWFTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 87 TQLNHP----------MSCMLLTTAISMKLGLVPFHFWFPEV-LQGSSLTTSLLLATIMKFPPTILLLLTS--------P 147
Cdd:PRK08676 191 TELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaaE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 383875084 148 SLNPTLLSMmAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAI 192
Cdd:PRK08676 271 QFSNVLIGL-GIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-192 |
1.84e-03 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 39.80 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 50 PRAIEASTKYFLTQAAASTLLLFSSMTNAWF----TGQWDITQL-NHPMS---------CMLLTTAIsmKLGLVPFHFWF 115
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLlNLPLPpgvqywlflAFFIAFAV--KMPMFPLHTWL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 116 PEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIASAAL-------GGWMGLNQTQVRKILAFSSISHLG 188
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLgviaiiyGALVALAQTDIKKLIAYSSISHMG 314
|
....
gi 383875084 189 WMAI 192
Cdd:PRK05846 315 FVTL 318
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
11-190 |
2.43e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.68 E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 11 MSLLLGTTITISSNHWVM---AW--TGLEINTLailpLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQWD 85
Cdd:PRK08168 107 AGVLAAVHLLVLSDHLLVliaAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 86 ITQL-----NHPMS------CMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATI--------MKFPPtilLLLTS 146
Cdd:PRK08168 183 LSALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAP---LLEQA 259
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 383875084 147 PSLNpTLLSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWM 190
Cdd:PRK08168 260 PPAR-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-189 |
5.77e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 38.39 E-value: 5.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 33 LEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFTGQWDITQLNH--PMSCMLLTTAISMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 111 FHFWFPEVLQGSSLTTSLLLATIM---KFPPTILLLLTSPSLNPtLLSMMAIASAALGGWMGLNQTQVRKILAFSSISHL 187
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVvkaGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
..
gi 383875084 188 GW 189
Cdd:PRK07234 282 GF 283
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-285 |
7.09e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 37.99 E-value: 7.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 7 LIFSMSLllgttiTISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFL------TQAAASTLLLFSS----MT 76
Cdd:PRK06458 117 FLFTMLL------ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANaatvMG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 77 NAWFTGQW-DITQLNHPMSCMLLTTAISM-------KLGLVPFHFWFPE-----------VLQGSSLTTSLLLatIMKFP 137
Cdd:PRK06458 191 DGEMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYA--VLRYY 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 138 pTILLLLTSPSLNPTLLSMMAIASAALGGWMGLNQTQVRKILAFSSISHLGWMAIILIYNPKL----TLITFYLYSLTTT 213
Cdd:PRK06458 269 -ILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKS 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 383875084 214 AIFLTLTTTNTLKLATLMTT----WSKTPTLTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALL 285
Cdd:PRK06458 348 AIFFASGNVLQKYGTRDINVirglLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLL 423
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-333 |
8.09e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 38.13 E-value: 8.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 95 CMLLTTAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATIMKFPPTILLLLTSPSLNPTLLSMMAIA-----SAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 170 LNQTQVRKILAFSSISHLGWMAIILiynpKLTLITFYLYSLTTTAIFLTLTTTNTLKLATLMTT----------WSKTPT 239
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDeqdmrkmgglISFLPL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875084 240 LTATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATIIALLS-LLGLFFYLRLAYCATITISPSSTNHIKHWQTS 318
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEG 448
|
250
....*....|....*.
gi 383875084 319 K-SINMPTSILTALSI 333
Cdd:MTH00020 449 DwNLLLPLGILALGSI 464
|
|
|