|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.71e-160 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 452.35 E-value: 1.71e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 241 TATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYCATITISPSSTNYMKHWQTSKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 383875104 321 INTLTSILTALSTMLLPLSPTILTIP 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.27e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 396.10 E-value: 3.27e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSlNPTLLSMMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 241 TATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYCATITISPSSTNYMKHWQTSKS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 383875104 321 INTLT-SILTALSTMLLPLSPTILTI 345
Cdd:MTH00135 320 QLTLPlAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
6.53e-132 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 380.04 E-value: 6.53e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 241 TATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYCATITISPSSTNYMKHWQTSKS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 383875104 321 INTLTSILTALSTMLLPLSPTILTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
5.93e-119 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 347.22 E-value: 5.93e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 241 TATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYCATITISPSSTNYMKHWQ-TSK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQfENT 320
|
330 340
....*....|....*....|....*.
gi 383875104 320 SINTLTSILTALSTMLLPLSPTILTI 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.77e-95 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 286.86 E-value: 2.77e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 241 TATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYCATITISPSSTNYMKHWQTSKS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 383875104 321 INTLTSILTALSTMLLPLSPTILTIP 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
7.79e-83 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 255.24 E-value: 7.79e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWF 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 81 TGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 241 TATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYCATITISPSSTNYMKHWQTSKS 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 383875104 321 INTLTSILTALSTMLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
4.01e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 196.20 E-value: 4.01e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 1 MNPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 81 TGqwditqLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPtalLLLTSPSLNPTLLSMMAIA 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 241 TATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYCAtITISPSSTNYMKHWQTSKS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 383875104 321 INTLtSILTALSTMLLPLSPTILTI 345
Cdd:MTH00160 312 SLIL-NFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-336 |
1.63e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 176.23 E-value: 1.63e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 5 AKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 85 DItqlnhpMSCMLLttAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNP-TLLSMMAIASAA 163
Cdd:MTH00144 85 FS------MSLLLL--GLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 164 LGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTaaIFLALTSTNTLKLTTLMTTWSKTPTLTA- 242
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSS--GFLFFSLWSGDSGSMKDLGSLKPSYKTGl 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 243 TLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYCATItispsSTNYMKHWQTSKSIN 322
Cdd:MTH00144 235 SIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL-----SSSKSKKSNSSKVLN 309
|
330
....*....|....
gi 383875104 323 TLTSILTALSTMLL 336
Cdd:MTH00144 310 SSIISLNLLGGLLF 323
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-340 |
6.47e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 161.87 E-value: 6.47e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 7 LIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSsMTNAWFTgqwdI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLG-MTMMWSF----P 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 87 TQLNHPMSCMLLTtAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIASAALGG 166
Cdd:MTH00011 84 SLLKNITALMLLV-SLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 167 WMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTLTATLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 247 ILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYcATITISPSSTNYmkhwqTSKSINTLTS 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSSL-----KSAPYEPKTK 316
|
330
....*....|....
gi 383875104 327 ILTALSTMLLPLSP 340
Cdd:MTH00011 317 ILISMCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-338 |
7.24e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 145.59 E-value: 7.24e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 8 IFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMtnAWFTGQWDIT 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLYLSL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 88 qlnhpMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPtaLLLLTSPSLNPTLLSMMAIASAALGGW 167
Cdd:MTH00197 80 -----LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 168 MGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTLTATLMLI 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 248 LLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAYCATItispsstNYMKHWQTSKSINTLTSI 327
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI-------LSNWMINFLMKINLLYSG 305
|
330
....*....|.
gi 383875104 328 LTALSTMLLPL 338
Cdd:MTH00197 306 LFILLMMMLPL 316
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
5.03e-35 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 132.93 E-value: 5.03e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 14 LLGTTITISSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLIQATASTLLLF-SSMTNAwFTGQWDITQLNH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 92 PMS------------CMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLL----LTSPSLNP---T 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrllvEAFPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 153 LLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTL--ITFYL--YSLTTAAIFLALTSTNTLKLT 228
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLSRKGGE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 383875104 229 TLMT-----TWSKTPTLTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAY 298
Cdd:COG1007 351 AEEIedlagLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
3.77e-29 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 116.84 E-value: 3.77e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 14 LLGTTITISSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDITQL--- 89
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIaka 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 90 ------NHPM---SCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMK---FPPTA-LLLLTSPSLNPT---L 153
Cdd:PRK05777 193 ladgsgNSLLllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 154 LSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTL--ITFYL--YSLTTAAIF-LALTSTNTLKLT 228
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgVISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 383875104 229 TLMTTWS----KTPTLTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
2.10e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 110.51 E-value: 2.10e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 13 LLLGTTITISSNHWVMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLIQATASTLLLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 79 WFTGQWDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNptLLSMMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 159 IASAALGGWMGLNQTQIRKILAFSSISHLGWMTIIL----IYSPKLTLITFYLYSLTTAAIF--LALTSTNTLKLTTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFsiILALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383875104 233 TWSKTPTLTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
2.67e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.86 E-value: 2.67e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 23 SNHWVMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDITQL--------NHPM 93
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 94 SCM---LLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPT------LLSMMAIASAAL 164
Cdd:pfam00361 81 LLLlflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 165 GGWMGLNQTQIRKILAFSSISHLGWMTIIL----IYSPKLTLITFYLYSLTTAAIFLALTSTN-----TLKLTTLMTTWS 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIyrrvhTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 383875104 236 KTPTLTATLMLILLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
4.73e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 107.80 E-value: 4.73e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 13 LLLGTTITISSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDITQLNH 91
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 92 PMSC----MLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSmmAIASAALGGW 167
Cdd:MTH00199 186 ILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 168 MGLNQTQIRKILAFSSISHLGW----MTIILIYSPKLTLITFYLYSLTTAAIF--LALTSTNTLKLTTLMTTWSKTPTLT 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFsiILSLKLTKGLIVEVSGLSRKNPVIA 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 383875104 242 ATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRL 296
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
9.86e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 106.96 E-value: 9.86e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 14 LLGTTITISSNHWVMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDITQLNHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 93 ------------MSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSL-------NPTL 153
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 154 LSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTL--ITFYL--YSLTTAAIFLALTSTNTLKLTT 229
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLLRSYKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383875104 230 LMTTWSKT------PTLTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAglfktnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
3.23e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 93.67 E-value: 3.23e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 13 LLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDITQLNHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 93 MS----------CMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMK--------------FPPTALLLLTsps 148
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTkvgvyailrvltllFGADPALFLG--- 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 149 lnpTLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTI-ILIYSPKLTLITFYLY---SLTTAAIFLALTSTNT 224
Cdd:COG0651 273 ---TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLGLAGALFHLlnhALAKALLFLAAGAIER 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 383875104 225 LKLTTLMT----TWSKTPTLTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRL 296
Cdd:COG0651 350 ATGTRDLDklggLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
6.22e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 93.77 E-value: 6.22e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 15 LGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAI---------EASTKYFLIQATASTLLLFSSMTNAWFTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 84 ------------WDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFppTALLLLTSPSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 152 TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYSLTTAAIFLALTSTNTLKLTTLM 231
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASFTVICTLEEFGT 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 232 TTWSKT-------------------------PTLTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLS 286
Cdd:MTH00198 437 RTPTSRqrdgsfgnynlvrrlvdltilsrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 383875104 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-345 |
2.85e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 73.50 E-value: 2.85e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 7 LIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHP-RAIEASTKYFLIQATASTLLLFSSmtnAWFTGQ-- 83
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVYGF---SWLYGLsg 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 84 -----WDI------TQLNHPMSC----MLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTAL----LLL 144
Cdd:CHL00049 191 geielQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALatriFDI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 145 TSPSLNP---TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTIILI-------YSPKLTLITFYLYSL--TT 212
Cdd:CHL00049 271 PFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsndgYASMITYMLFYIFMNlgTF 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 213 AAIFLALTSTNTLKLTTLMTTWSKTPTLTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFF 292
Cdd:CHL00049 351 ACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYY 430
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 383875104 293 YLRLAYCATITISPSSTNYMKHWQTSkSINTLTSIltALSTMLLPLSPTILTI 345
Cdd:CHL00049 431 YLKIIKLLMTGRNQEITPYVRNYRRS-PLRSNNSI--ELSMIVCVIASTIPGI 480
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
5.92e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.36 E-value: 5.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 33 LEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFS-SMTNAwFTGQWDI----------TQLNHPMSCMLLttA 101
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMadlagalaenPTVVTAFGFVLL--A 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 102 ISMKLGLVPFHFWFPEVLQG-SSLMTSLLLATIMKFPPTALLLLT------SPSLNPTLLSM-MAIASAAL--GGWMGLN 171
Cdd:PRK08375 212 LALKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLlAVLALLSMlvGSLAALG 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 172 QTQIRKILAFSSISHLGWMTIILIYSPKLTLI--TFYL--YSLTTAAIFLALTSTNTLKLTTLMTTWS----KTPTLTAT 243
Cdd:PRK08375 292 QDDVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAIEVTYGTRRLSELSglgrRMPLTAAA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 383875104 244 LMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAY 298
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.14e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 62.38 E-value: 1.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 50 PRAIEASTKYFLIQATASTLLLF---------------SSMTNAWFTGQWDITQLnhpmSCMLLTTAISMKLGLVPFHFW 114
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgssllyglsggstqlSAIALALITSPSLGLAL----ALVFVIAGIAFKISAVPFHQW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 115 FPEVLQGSSLMTSLLLATIMKFPPTAL---LLLTS-PSLNP---TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHL 187
Cdd:PRK02504 233 TPDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAfPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQA 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 188 GWMTIILI------YSPKLTLITFYLYSLTTA--AIFLALTSTNTLKLTTLMTTWSKTPTLTATLMLILLSLAGLPPLTG 259
Cdd:PRK02504 313 GFVMIGLVagteagYASMVFYLLAYLFMNLGAfaCVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAG 392
|
....
gi 383875104 260 FLPK 263
Cdd:PRK02504 393 FFGK 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
3.56e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.88 E-value: 3.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 33 LEINTLAILPLIS-KSHHPRAIEASTKYFLIQATASTLLLFS---------SMTNAWFTGQWDITQLNHPMSCM-LLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 102 ISMKLGLVPFHFWFPEVLQG--SSLMTSLLLATIMKFPPTALLLLT--SPSLNPT----LLSMMAIASAALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 174 QIRKILAFSSISHLGWM------TIILIYSPKLTLITFY-----LYSLTTAAIFLALTSTNTLKLTTLMTTWS------- 235
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMASYGEIalaggIYHIVNHALYKALLFLTAGAVIYETGTRNlnelggl 389
|
250 260 270
....*....|....*....|....*....|...
gi 383875104 236 --KTPTLTATLMLILLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 arTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
3.93e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 60.72 E-value: 3.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 50 PRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQ-WDITQL-NHPMSCMLLT-------TAISMKLGLVPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 121 GSSLMTSLLLATIM-KFPPTALLLLTSPsLNP-------TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLlKMGTYGFLRFNLP-LFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 193 ILIYSPKLTLI--TFYLYS--LTTAAIFLALTS----TNTLKLTTLMTTWSKTPTLTATLMLILLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....*...
gi 383875104 265 LIIQELTKqdltaAATVIALLSLLGLFF 292
Cdd:TIGR01972 391 LILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
8-298 |
3.28e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 58.24 E-value: 3.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 8 IFSMSLLlgttitISSNHWVMAWTGLEINTLAILPLISKSHH-PRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDI 86
Cdd:COG1009 121 MAAMLGL------VLSDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 87 TQLNH----PMSCMLLTTAISM-------KLGLVPFHFWFPEVLQGSSLMTSLLLATIMKfppTA---LLLLTSP--SLN 150
Cdd:COG1009 195 SELLAaaptILSSPLLTLILLLlllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMV---KAgvyLLARLSPlfALS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 151 PTLLSMMAI---ASAALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYSpKLTLITFYL--YSLTTAAIFLALTSTNTL 225
Cdd:COG1009 272 PVWLTVVAIigaITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG-AYVAALFHLltHAFFKALLFLGAGSVIHA 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 226 K----LTTLMTTWSKTPtLTATLMLI-LLSLAGLPPLTGFLPKWLIIQE-LTKQDLTAAATVIALL-SLLGLFFYLRLAY 298
Cdd:COG1009 351 TgtrdIRKMGGLRKKMP-ITAITFLIgALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-292 |
6.39e-09 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 57.01 E-value: 6.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 49 HPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQW--DITQL-NHPMS---------CMLLTTAIsmKLGLVPFHFWFP 116
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELaAAPLPltaqlllflAFFIAFAV--KVPMFPFHTWLP 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 117 EVLQGSSLMTSLLLATIMK--------------FPPTALLLLTspslnptLLSMMAIASAALGGWMGLNQTQIRKILAFS 182
Cdd:COG1008 234 DAHVEAPTAGSVLLAGVLLkmggygllrfalplFPEASAYFAP-------LLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 183 SISHLGWMTI-ILIYSPK-LTLITFYLYS--LTTAAIFLALTSTNTLKLTTLMT----TWSKTPTLTATLMLILLSLAGL 254
Cdd:COG1008 307 SVSHMGFVLLgIFALNPLgLQGAVLQMVShgLITAALFLLVGVLYDRTHTRDIAdlggLAKRMPVLAALFLLAALASLGL 386
|
250 260 270
....*....|....*....|....*....|....*...
gi 383875104 255 PPLTGFLPKWLIIQELTKqdltaAATVIALLSLLGLFF 292
Cdd:COG1008 387 PGTSGFVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-285 |
1.78e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 52.62 E-value: 1.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 7 LIFSMSLllgttiTISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLI------QATASTLLLFSS----MT 76
Cdd:PRK06458 117 FLFTMLL------ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANaatvMG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 77 NAWFTGQW-DITQLNHPMSCMLLTTAISM-------KLGLVPFHFWFPEV-LQGSSLMTSLLLATIMKFPPTALL---LL 144
Cdd:PRK06458 191 DGEMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVALYAVLryyIL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 145 TSPSLNP----TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTIIL-IYSPKLT---LITFYLYSLTTAAIF 216
Cdd:PRK06458 271 IDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALgIGGPLGIfaaLLHMLNHSLTKSAIF 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 383875104 217 LALTSTNTLKLTTLMT----TWSKTPTLTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALL 285
Cdd:PRK06458 351 FASGNVLQKYGTRDINvirgLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLL 423
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-298 |
4.14e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 51.54 E-value: 4.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 2 NPQAKLIFSMSLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHpRAIEASTKYFLIQATASTLLLFSSMTNAWFT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 82 GQWDITQLNHPMS-----------CMLLTTAISMKLGLVPFHFWFPE-----------VLQGS-SLMTSLLLATIMKFPP 138
Cdd:PRK08668 175 GTFDFADISQGLIndtstgfalivFLFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 139 TALLLLT------SPSLNPTLLSMMAIaSAALGGWMGLNQTQIRKILAFSSISHLGWmtiILIYSPKLTLITF------- 205
Cdd:PRK08668 255 GTKLFSEfgtyrgVPLFNYILAWLGNI-SIIVGTLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFagglfhv 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 206 YLYSLTTAAIFLALTSTNTLKLTTLMTTWS----KTPTLTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATV 281
Cdd:PRK08668 331 FNHALFKGLFFLIFAAVIYRTGTTKISEMGglieKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFM 410
|
330
....*....|....*..
gi 383875104 282 IALLSLLGLFFYLRLAY 298
Cdd:PRK08668 411 AFFGSIGSFLYVFRPLA 427
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
4.22e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 46.10 E-value: 4.22e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 383875104 291 FFYLRLAYCATITISPSSTNYMKHWQT-SKSINTLTSILTALSTMLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFnSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-304 |
1.44e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.04 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 96 MLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSL--NPT---LLSMMAIASAALGGWMGL 170
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 171 NQTQIRKILAFSSISHLGWM-TIILIYSP-KLT--LITFYLYSLTTAAIFLALTSTNTLK----LTTLMTTWSKTPTLTA 242
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIGVVDHQAgtrdIRRLGSLWRRMPFTFV 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 383875104 243 TLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLtAAATVIALLSLLGLFFYLRLAYCATITI 304
Cdd:PRK12650 372 SVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPG-GNAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-335 |
1.49e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 49.69 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 95 CMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIA-----SAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 170 LNQTQIRKILAFSSISHLGWMTIIL-IYSPKLTLITFYLYSLTTAAIFLALTSTNTLKL----TTLMTTWSKTPTLTATL 244
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSdeqdMRKMGGLISFLPLTYIF 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 245 MLI-LLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLS-LLGLFFYLRLAYCATITISPSSTNYMKHWQTSKSIN 322
Cdd:MTH00020 373 FLIgSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNL 452
|
250
....*....|...
gi 383875104 323 TLTSILTALSTML 335
Cdd:MTH00020 453 LLPLGILALGSIF 465
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-286 |
3.43e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 48.76 E-value: 3.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 109 VPFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPT-----LLSMMAIASAALGGWMGLNQTQIRKILAFSS 183
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 184 ISHLGWMTIILIYSPKLTLITFYLY----SLTTAAIFLALTSTNTLK----LTTLMTTWSKTPTLTATLMLILLSLAGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDHETgtrdITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170 180 190
....*....|....*....|....*....|..
gi 383875104 256 PLTGFLPKWLIIQELTKQDLTAAA-TVIALLS 286
Cdd:PRK12647 372 PLFGFLAKELIYEALLEAPLWSLIlTVAAVLG 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
97-263 |
8.35e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 47.61 E-value: 8.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 97 LLTTAISmKLGLVPFHFWFPEVLQGSSLMTSLLLATIM---------KFPPTallLLTSPSLNPTLLSMmAIASAALGGW 167
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLVL-GLATMLLGGW 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 168 MGLNQTQIRKILAFSSISHLGWMTIIL-IYSPKLTLITFYL---YSLTTAAIFLALTSTNTLK----LTTLMTTWSKTPT 239
Cdd:PRK12644 284 RALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMllaHALFKAALFLVVGIIDHSTgtrdIRKLSGLGRRQPV 363
|
170 180
....*....|....*....|....
gi 383875104 240 LTATLMLILLSLAGLPPLTGFLPK 263
Cdd:PRK12644 364 LAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-298 |
1.05e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 46.87 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 53 IEASTKYFLIQATASTLLL---------FSSMTNAWFTGQWDITQLNHPMS--CMLLTTAISMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMRLNDMGDTATLTtiALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 122 SSLMTSLLLATIMK-------FPPTALLLLTSPSLNPTLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTI-I 193
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 194 LIYSPK-LTLITFYLYS--LTTAAIFLALTSTNTLKLTTLMTTWS----KTPTLTATLMLILLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAgINGAIFYLVHdmVVKTALFLIAGSLVRLTGYRSLQYLGglyrKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|....*
gi 383875104 267 IQ---ELTKQDLTAAATVIALLSLLGLFFYLRLAY 298
Cdd:PRK12663 396 VQgalDNGAYILLALMLITSLITMYSLFRIFFLAY 430
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
103-268 |
1.31e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.88 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 103 SMKLGLvpfHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIA-----SAALGGWMGLNQTQIRK 177
Cdd:MTH00032 239 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAATVGLVQNDLKK 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 178 ILAFSSISHLGWMTIILIYSPKLTLITFYL--YSLTTAAIFLALTSTNTLKLTTLMTTWS-----KTPTLTATLMLI-LL 249
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSAGSVIHSTTVDEQDMRKmggliHSIPFTYTMMLIgSF 395
|
170
....*....|....*....
gi 383875104 250 SLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILE 414
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
2.84e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 45.71 E-value: 2.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 33 LEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDITQLNH--PMSCMLLTTAISMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 111 FHFWFPEVLQGSSLMTSLLLATIM---KFPPTALLLLTSPSLNPtLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHL 187
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVvkaGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 188 GWmtiiLIYSPkltlITFYLYSLTTAAIFLALTSTNTLKLTTLMTTWSKTPTLTATLMLILL---SLAGLPPLTGFLPKW 264
Cdd:PRK07234 282 GF----ILAAP----LVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMasfSIAGFPLLAGFVSKV 353
|
....*..
gi 383875104 265 LIIQELT 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
2.85e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.98 E-value: 2.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 48 HHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDITQL-----------NHPM---SCMLLTTAISMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselienikGHPLfliTLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 114 WFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPT-----LLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 189 WMTIILIYSPK------LTLITFYLYSLTT--AAIFLALTSTNTLKLT----TLMTTWSKTPTLTATLMLILLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATfkACLFLVAGIVAHEAATrdirKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 383875104 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-190 |
6.97e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 44.31 E-value: 6.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 55 ASTKYFLIQATASTLLLFSSMTNAWFTG--QWDITQLNH---PMSCMLLTTA-----ISMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRShtlPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 383875104 125 MTSLLLATIMKFPPTALLLLTSPSLNPTL-------LSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLRFGVGLFPEAwvylapwLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-192 |
7.76e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 44.36 E-value: 7.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 13 LLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATA------STLLLFSSMTNAWFTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 87 TQLNHP----------MSCMLLTTAISMKLGLVPFHFWFPEV-LQGSSLMTSLLLATIMKFPPTALLLLTS-------PS 148
Cdd:PRK08676 191 TELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 383875104 149 LNPTLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTI 192
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
1.88e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 43.18 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 33 LEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFS-----SMTNAWFTGqwDITQLNHPM--------SCMLLT 99
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMG--DMFLIIQDLptnraiqiGVLFIM 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 100 TAISMKLGLVPFHFWFPEVLQG---------SSLMTSLLLATIMKFPPT---ALLLLTSPSLNPTLLSMMAIAsAALGGW 167
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAYSEapsfisvffSGTSTKVMIYLIIRIVYDvfkANFVFTTLPFNNVFMILAALA-IVFGSV 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 168 MGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLY----SLTTAAIFLALTSTN----TLKLTTLMTTWSKTPT 239
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPK 375
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 383875104 240 LTATLMLILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRL 296
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
2.10e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.10 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 34 EINTLAILPLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDITQ-----LNHPMSCMLLTTAISMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 109 V------PFHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLL------TSPSLNPTLLSMMAIASAA--LGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVifklfgGLSYFPSAQGVLIALSVLAmvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 175 IRKILAFSSISHLGWMTIILIYSPKLTLITFYLYS----LTTAAIFLALTSTNTLKLTTLMT----TWSKTPTLTATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGIVSYRTKTSNLRklggLLPVMPVVAFMVLC 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 383875104 247 ILLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLSLLGLFFYLRLAY 298
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
7.90e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 40.96 E-value: 7.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 50 PRAIEASTKYFLIQATASTLLLFSSMTNAWF----TGQWDITQL-NHPMS---------CMLLTTAIsmKLGLVPFHFWF 115
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLlNLPLPpgvqywlflAFFIAFAV--KMPMFPLHTWL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 116 PEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIASAAL-------GGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLgviaiiyGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 189 WMTiILIYSPKLTLI---TFYLYS--LTTAAIFLALTSTNTLKLTTLMT----TWSKTPTLTATLMLILLSLAGLPPLTG 259
Cdd:PRK05846 315 FVT-LGIFAGNQLGIqgaIFQMIShgLSSAALFLLVGVLYDRLHTRDIAdyggLAKVMPVLAAFFLFFAMASLGLPGTSG 393
|
....*...
gi 383875104 260 FLPKWLII 267
Cdd:PRK05846 394 FVGEFLIL 401
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-192 |
1.40e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 40.40 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 55 ASTKYFLIQATASTLLLFSSMTNAWFTGQ--WDITQL---NHPMSCMLLT-----TAISMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELgakSYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 383875104 125 MTSLLLATIM-KFPPTALLLLTSPSLNPT------LLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMTI 192
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-195 |
1.58e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 40.29 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 101 AISMKLGLVPFHFWFPEVLQGSSLMTSLLLATI-MKFPPTALLLLTSP-------SLNPTLLSmMAIASAALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSWPilplgaqNLAPAVIA-MGIVGIVYGSFATCRQ 317
|
90 100
....*....|....*....|...
gi 383875104 173 TQIRKILAFSSISHLGWMTIILI 195
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLV 340
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
52-190 |
1.88e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.01 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 52 AIEASTKYFLIQATASTLLLFSSMTNAWFTGQWDITQLNHPMSCMLLTTAISMKLGLV----------------PFHFWF 115
Cdd:PRK07376 171 AADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 116 PEVLQGSSLMTSLLLATIMKFPPTALLLLTSPSLNPTLLSMMAIA-----SAALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK07376 251 PDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAwtgaiTAFLGASIALTQNDIKKGLAYSTISQLGYM 330
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-288 |
3.64e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.18 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 97 LLTTAISMKLGLVPFHFWFPE-----------VLQGssLMTSLLLATIMKfppTALLLLTSPSLNpTLLSMMAIASAALG 165
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAG--LLTKVGVYAIIR---THTLLFPGGGLD-TLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 166 GWMGLNQTQIRKILAFSSISHLGWMTIILIYSPKLTLITFYLYS----LTTAAIFLALTSTNTLKLTTLMTTWS---KTP 238
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVGLIERQAGSSSLRRLGglaKAS 367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 383875104 239 TLTATLMLI-LLSLAGLPPLTGFLPKWLIIQELTKQD------LTAAATVIALLSLL 288
Cdd:PRK12665 368 PLLAVLFFVpALNLGGIPPFSGFIGKVALLEAGAEDGtwlawaLVAGGVVTSLLTLY 424
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
11-190 |
5.29e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.53 E-value: 5.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 11 MSLLLGTTITISSNHWVM---AW--TGLEINTLailpLISKSHHPRAIEASTKYFLIQATASTLLLFSSMTNAWFTGQWD 85
Cdd:PRK08168 107 AGVLAAVHLLVLSDHLLVliaAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 86 ITQL-----NHPMS------CMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATI--------MKFPPtalLLLTS 146
Cdd:PRK08168 183 LSALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAP---LLEQA 259
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 383875104 147 PSLNpTLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK08168 260 PPAR-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
103-308 |
5.87e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.45 E-value: 5.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 103 SMKLGLvpfHFWFPEVLQGSSLMTSLLLATIMKFPPTALLLLTSP-----SLNPTLLSMMAIASAALGGWMGLNQTQIRK 177
Cdd:MTH00210 225 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPlfegsPLALTIVTILGALTAFFAATVGVVQNDLKK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 178 ILAFSSISHLGWMTI---ILIYSPKLtlitfylYSLTTAAIFLALTSTNTLKLTTLMT---------TWSKTPTLTATLM 245
Cdd:MTH00210 302 VIAYSTCSQLGYMVMvcgISNYSTSL-------FHLMNHAFFKALLFLSAGSVIHAVSdeqdmrkmgGLIKSIPFTYVMI 374
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 383875104 246 LI-LLSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIALLS-LLGLFFYLRLAYCATITISPSS 308
Cdd:MTH00210 375 LIgSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLIYLTFITNTNSK 439
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-195 |
7.82e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 38.17 E-value: 7.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 59 YFLIQATASTLLLFSSMTNAWF-TGQWDITQLNHP-----MSCMLLTTAISMKLGLVPFHFWFPEVLQG-----SSLMTS 127
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIqTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPAspsnvSALMSG 245
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 383875104 128 LLLATIMKFPPTALLLLTSPSLNPTLLSMMA-IASAALGGWMGLNQTQIRKILAFSSISHLGwmtIILI 195
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPELWWGVLILLAgSISALLGVIYALKEHDLKGLLAYSSIENIG---IILM 311
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-284 |
8.91e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 37.87 E-value: 8.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 2 NPQAKLIFSMSLLLGTTITISSNHWVMaWTGLEINTLAILPLISKSHHPRAIEASTKYFLIQATASTLL-------LFSS 74
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLflpavilIYTK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 75 MTNAWFTGQwDITQLNHPMSCMLLTTAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIM----KFPPTALLLLTSPSLN 150
Cdd:PRK06589 194 TGNLDFVSG-GLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSY 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383875104 151 PTLLSMM-------AIASAALGGWMGLNQTQIRKILAFSSISHLGW--MTIILIYSPKLTLITFYL--YSLTTAAIFLAL 219
Cdd:PRK06589 273 LQRIFAEfnwlifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSM 352
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 383875104 220 TSTNTLKLTTLMTTWSKTPTLTATLMLIL----LSLAGLPPLTGFLPKWLIIQELTKQDLTAAATVIAL 284
Cdd:PRK06589 353 GSIYSLKKEDQVDKLHGTSKSFPLISFIIsissLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| |
