|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-299 |
5.55e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 337.88 E-value: 5.55e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLLT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFM 80
Cdd:MTH00165 231 IRFNNLLFSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFL 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 81 CAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTAS 160
Cdd:MTH00165 311 CAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVS 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 161 YSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYMIVLPWYLSFLTFFVVIVGSYLGY 240
Cdd:MTH00165 391 YSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGY 470
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 406044698 241 LISDFDYFYGLFSLNFLSFVSFVGSMWFMPFLSTNYISYLPLKFGYNSSKSLNYGW*DF 299
Cdd:MTH00165 471 ELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEY 529
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-296 |
2.29e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 237.82 E-value: 2.29e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPML-LT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLF 79
Cdd:MTH00151 227 IRFFPFLsSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLF 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 80 MCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTA 159
Cdd:MTH00151 307 LCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTA 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 160 SYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYMIVLPWYLSFLTFFVVIVGSYLG 239
Cdd:MTH00151 387 LYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLS 466
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 406044698 240 YLISDFDYFYGLFSLNflsfVSFVGSMWFMPFLSTNYISYLPLKFGYNSSKSLNYGW 296
Cdd:MTH00151 467 FGFWDSGFSSSKMVKL----SFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGW 519
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-296 |
2.40e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 238.01 E-value: 2.40e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPML-LT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLF 79
Cdd:MTH00209 226 IRFFPSLfSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLF 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 80 MCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTA 159
Cdd:MTH00209 306 ICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTA 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 160 SYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYMIVLPWYLSFLTFFVVIVGSYLG 239
Cdd:MTH00209 386 AYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLM 465
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 406044698 240 YLISDfdyfYGLFSLNFLSFVSFVGSMWFMPFLSTNYISYLPLKFGYNSSKSLNYGW 296
Cdd:MTH00209 466 YMVLK----KNFFLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGW 518
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-299 |
1.23e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 231.19 E-value: 1.23e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLLT*NygWF---LLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKAL 77
Cdd:MTH00207 230 IRFYPFLSSTY--WFnpaLLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKAL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 78 LFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGL 157
Cdd:MTH00207 308 LFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATAL 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 158 TASYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYMIVLPWYLSFLTFFVVIVGSY 237
Cdd:MTH00207 388 TAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGAL 467
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 406044698 238 LGYLISDFDYFYGLFSLNFLSFVSFVGSMWFMPFLSTNYISYLPLKFGYNSSKSLNYGW*DF 299
Cdd:MTH00207 468 LAWLFTTPNITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEM 529
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-299 |
5.41e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 184.77 E-value: 5.41e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLLT*NY-GWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLF 79
Cdd:MTH00211 255 IRLSPLFQNNQLiLGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLF 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 80 MCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTA 159
Cdd:MTH00211 335 MCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTA 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 160 SYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYMIV-LPWYLSFLTFFVVIVGSYL 238
Cdd:MTH00211 415 AYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLL 494
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 406044698 239 GylisdFDYFYGLFSLNFLSFVSFVGSMWFMPFLSTNYISYLPLKFG-YNSSKSLNYGW*DF 299
Cdd:MTH00211 495 G-----LELVNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGqTLSTHLMDLGWYEK 551
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-178 |
2.11e-52 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 180.74 E-value: 2.11e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLLT*NYGWFL-LLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLF 79
Cdd:MTH00004 260 IRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLF 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 80 MCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTA 159
Cdd:MTH00004 340 LCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTA 419
|
170
....*....|....*....
gi 406044698 160 SYSFRLFYYSMMGDNNFYP 178
Cdd:MTH00004 420 AYSLRMILLVQTGFPRTPP 438
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-299 |
1.06e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 174.00 E-value: 1.06e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLlt*NYGWFL---LLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKAL 77
Cdd:MTH00208 287 IRTSPLI--SNSPWFLslcLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAM 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 78 LFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGL 157
Cdd:MTH00208 365 LFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLL 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 158 TASYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPyMIVLPWYLSFLTFFVVIVGSY 237
Cdd:MTH00208 445 TAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAA 523
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 406044698 238 LGYLISdfdYFYGLFSLNFLSFVSFVGSMWFMPFLSTNYISYLPLKFGYNSSKSLNYGW*DF 299
Cdd:MTH00208 524 FSFSFL---LSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSEN 582
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-235 |
2.42e-47 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 166.95 E-value: 2.42e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLLT*NYGWFLLL-VGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLF 79
Cdd:MTH00108 261 IRFHPLMENNKTIQTLTLcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 80 MCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTA 159
Cdd:MTH00108 341 MCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTA 420
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 406044698 160 SYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFP--VPYMiVLPWYLSFLTFFVVIVG 235
Cdd:MTH00108 421 AYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIPQM-TMPLYLKLTALAVTILG 497
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-243 |
7.93e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 160.07 E-value: 7.93e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPML------LT*nygwfLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALF 74
Cdd:MTH00066 258 IRFHPLLennqtaLTI-----CLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFF 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 75 KALLFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFIS 154
Cdd:MTH00066 333 KAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIA 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 155 TGLTASYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYMIV-LPWYLSFLTFFVVI 233
Cdd:MTH00066 413 TSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILtMPTFMKLAALLVTL 492
|
250
....*....|
gi 406044698 234 VGSYLGYLIS 243
Cdd:MTH00066 493 LGLLIALDLA 502
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-178 |
2.81e-44 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 158.84 E-value: 2.81e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPML------LT*nygwfLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALF 74
Cdd:MTH00137 266 IRLSPLMennqtaLTT-----CLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFF 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 75 KALLFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFIS 154
Cdd:MTH00137 341 KAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIA 420
|
170 180
....*....|....*....|....
gi 406044698 155 TGLTASYSFRLFYYSMMGDNNFYP 178
Cdd:MTH00137 421 TSFTAVYSLRVVFFVSMGHPRFNP 444
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-242 |
2.93e-44 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 158.78 E-value: 2.93e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPML-LT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLF 79
Cdd:COG1009 262 ARLSPLFaLSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLF 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 80 MCAGSMIHNLSdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE-VVCLSWVNFLIFFLYFISTGLT 158
Cdd:COG1009 342 LGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLT 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 159 ASYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWL---------IFPVPYMIVLPWYLSFLTF 229
Cdd:COG1009 421 AFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPL 500
|
250
....*....|...
gi 406044698 230 FVVIVGSYLGYLI 242
Cdd:COG1009 501 LLSLLGIALGYLL 513
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-242 |
1.48e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 145.89 E-value: 1.48e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPM-LLT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLF 79
Cdd:TIGR01974 264 ARTSPLfELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLF 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 80 MCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTA 159
Cdd:TIGR01974 344 LGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTA 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 160 SYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYMIV-----------LPWYLSFLT 228
Cdd:TIGR01974 424 FYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSP 503
|
250
....*....|....
gi 406044698 229 FFVVIVGSYLGYLI 242
Cdd:TIGR01974 504 TAVAILGILLAYLL 517
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
15-242 |
1.04e-38 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 143.76 E-value: 1.04e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 15 FLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFMCAGSMIHNLSDSQD 94
Cdd:PRK06590 283 FVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQD 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 95 IRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVcLSWVNFLIFFLYFISTGLTASYSFRLFYYSMMG-- 172
Cdd:PRK06590 363 IRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGke 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 173 -DNNFYPSyffdDKSYFISFGMIGLLFVAVFGG-----SFLSWLIFP-----VPYMIVLPWYLSFLTFFVVIVGSYLGYL 241
Cdd:PRK06590 442 kEKIHHPH----ESPAVMTLPLIVLAVLSVFAGalivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAWL 517
|
.
gi 406044698 242 I 242
Cdd:PRK06590 518 L 518
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
3-298 |
1.98e-38 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 142.84 E-value: 1.98e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 3 FSPMLLT*nygwFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFMCA 82
Cdd:MTH00210 270 GSPLALT-----IVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSA 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 83 GSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTASYS 162
Cdd:MTH00210 345 GSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYS 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 163 FRLFYYSMMGDNNFYPSYFF--DDKSYFISFGMIGLLFVAVFGGS-----FLSWLIFPvpymiVLPWYLSFLTFFVVIVG 235
Cdd:MTH00210 425 IRLIYLTFITNTNSKKEVFIgvHESSWNITFPLLLLAFGSIFVGYlgkevVLSNVIPP-----IVPNSIKMIPLLFSLLG 499
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 406044698 236 SYLGYLISDFDYFY------GLFSLNFLSFVSFVGSMWFMPFLSTNYISYLPLKFGYnsskSLNYGW*D 298
Cdd:MTH00210 500 ALLAFVIYNSMVFLikisrrGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGH----LITYRIID 564
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
18-257 |
9.40e-38 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 140.98 E-value: 9.40e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 18 LVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFMCAGSMIHNLSDSQDIRF 97
Cdd:MTH00020 279 IVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRK 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 98 MGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTASYSFRLFYYSMMGDNNFY 177
Cdd:MTH00020 359 MGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLK 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 178 PSYFFD--DKSYFISFGMIGLLFVAVFGGSFLSWLIF--------PVPYMI-VLPWYLSFL-TFFVVIVGSYLGYLISDF 245
Cdd:MTH00020 439 KAVFFHlhEGDWNLLLPLGILALGSIFVGYLAKEMIWsfqitlppIVPLSIkLLPVFLSLGgIGLVIILYFYSSKTFRVP 518
|
250
....*....|..
gi 406044698 246 DYFYGLFSLNFL 257
Cdd:MTH00020 519 FSFIGRNSYTFL 530
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
15-173 |
1.62e-31 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 123.60 E-value: 1.62e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 15 FLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFMCAGSMIHNLSD--- 91
Cdd:PRK07376 293 VIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvg 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 92 -----SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSwvNFLIFFLYFISTGLTASYSFRLF 166
Cdd:PRK07376 373 hdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMY 450
|
....*..
gi 406044698 167 YYSMMGD 173
Cdd:PRK07376 451 FLTFEGE 457
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
161-296 |
4.40e-29 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 109.18 E-value: 4.40e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 161 YSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYMIVLPWYLSFLTFFVVIVGSYLGY 240
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 406044698 241 LISDFDYFYGLFSLNFlSFVSFVGSMWFMPFLSTNYISYLPLKFGYNSSKSLNYGW 296
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGW 135
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-154 |
6.46e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 106.63 E-value: 6.46e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLLT*NYGW--FLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYG---LAFFHLLTHALFK 75
Cdd:pfam00361 133 IRRSLLYLPSSPFIqqILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFS 212
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 406044698 76 ALLFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFIS 154
Cdd:pfam00361 213 AGLFLCAGSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
18-191 |
2.24e-26 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 108.83 E-value: 2.24e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 18 LVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFMCAGSMIHNL-------- 89
Cdd:CHL00025 296 LIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgysp 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 90 SDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVvclSWVNFLIF-FLYFISTGLTASYSFRLFYY 168
Cdd:CHL00025 376 DKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILND---SWLYSPIFaIIAWSTAGLTAFYMFRIYLL 452
|
170 180
....*....|....*....|....*.
gi 406044698 169 SMMGD---NNFYPSYFFDDKSYFISF 191
Cdd:CHL00025 453 TFEGHlrvHFQNYSGKKNSSFYSISL 478
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
3-168 |
1.56e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 96.37 E-value: 1.56e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 3 FSPMLLT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMG-YYGL--AFFHLLTHALFKALLF 79
Cdd:COG0651 262 LFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGtPLGLagALFHLLNHALAKALLF 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 80 MCAGSMIHNLsDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVcLSWVNFLIFFLYFISTGLTA 159
Cdd:COG0651 342 LAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTL 419
|
....*....
gi 406044698 160 SYSFRLFYY 168
Cdd:COG0651 420 AYFVRIFGR 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
18-299 |
3.56e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 96.57 E-value: 3.56e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 18 LVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSM-GYYGLAFFHLLTHALFKALLFMCAGSMIHNLS-DSQDI 95
Cdd:MTH00032 294 IFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDM 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 96 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCL----------------------------------- 140
Cdd:MTH00032 374 RKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddrgsiggpegy 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 141 -SWVNFLIFFLYFISTGLTASYSFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPV----- 214
Cdd:MTH00032 454 pSRGSAFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdi 533
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 215 ------PYMIVLPWYLSFLTFFVVIVGSYLGYLISDFDYFYGLFSLNFLSFVSFVGSMWFMPFLSTNYISYLPLKFG-YN 287
Cdd:MTH00032 534 ehpivpPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGhWG 613
|
330
....*....|..
gi 406044698 288 SSKSLNYGW*DF 299
Cdd:MTH00032 614 IYKTLDRGWLEL 625
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
2-287 |
8.26e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 92.29 E-value: 8.26e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 2 RFSPMLLT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFMC 81
Cdd:MTH00095 216 NFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQ 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 82 AGSMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTGLTASY 161
Cdd:MTH00095 296 VGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGY 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 162 SFRLFYYSMMGDNNFYPSYFFDDKSYFISFGMIgllfvaVFGGSFLSWLIFpvpYMIVLPWYLSFLTFFVVIVGSYLGYL 241
Cdd:MTH00095 376 SYRLWKSFFLSFSKVVNVYSSSVLMNFLSLMLV------FFSVFFLWWLNF---NLLNLPSLFLYLDFYVPLFYLFMIML 446
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 406044698 242 ISDFDYFYGLFSLNFLSFVSFVGSMWFMPFLSTNYISYLPLKFGYN 287
Cdd:MTH00095 447 FSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFGYK 492
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-172 |
1.58e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 85.32 E-value: 1.58e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 11 NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLG---LMMSILSMGYYGLAFFHLLTHALFKALLFMCAGSMIH 87
Cdd:PRK08375 269 GLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGyilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEV 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 88 NlSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK-DLILEVVCLSWVNFLIFFLyfISTGLTASYSFRLF 166
Cdd:PRK08375 349 T-YGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIW 425
|
....*.
gi 406044698 167 YYSMMG 172
Cdd:PRK08375 426 YRAFFG 431
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-136 |
6.73e-18 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 83.94 E-value: 6.73e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLL-T*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGY---YGLAFFHLLTHALFKA 76
Cdd:PRK12650 259 LRFSPVFHdVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKS 338
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 77 LLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 136
Cdd:PRK12650 339 SLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLT 397
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
2-136 |
7.83e-17 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 80.57 E-value: 7.83e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 2 RFSPML-LT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMG-------------YYGL---- 63
Cdd:PRK12646 262 RFTPLLgLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasIYVFvlfa 341
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 406044698 64 AFFHLLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 136
Cdd:PRK12646 342 ALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
2-172 |
1.59e-16 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 79.58 E-value: 1.59e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 2 RFSPmLLT*NYGWFLL--LVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMG------------YYGLAF-- 65
Cdd:PRK12645 262 RFTP-IFAGSQVWFWTvtLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGaaslhyqgddskIYAAAIta 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 66 --FHLLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVC---- 139
Cdd:PRK12645 341 aiFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLnate 419
|
170 180 190
....*....|....*....|....*....|....*...
gi 406044698 140 -----LSWVNFLIFFLYFISTGLTASYSFRLFYYSMMG 172
Cdd:PRK12645 420 anlfsLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFG 457
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-167 |
1.30e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 76.93 E-value: 1.30e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 16 LLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGY-YGL--AFFHLLTHALFKALLFMCAGSMIHNlSDS 92
Cdd:PRK12667 298 LIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTqLGLaaALFHIINHAIAKSLLFLASGVFIHA-AGT 376
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 406044698 93 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSwvNFLIFFLY-FISTGLTASYSFRLFY 167
Cdd:PRK12667 377 RDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLES--GFYLPALVlLIASAISLVGYFRAWY 450
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
14-164 |
1.64e-15 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 76.77 E-value: 1.64e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 14 WFLL--LVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGY-YGL--AFFHLLTHALFKALLFMCAGSMIHN 88
Cdd:PRK12648 270 WFWIvgGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSpLAAvaAIFHIINHATFKASLFMAAGIIDHE 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 89 lSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDL----ILEVVCLSWVNFLIFFLYFISTGLTASYSFR 164
Cdd:PRK12648 350 -TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
14-167 |
3.26e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 73.03 E-value: 3.26e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 14 WFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMG-----YYGLAFfhLLTHALFKALLFMCAGSMIHN 88
Cdd:PRK12644 268 PTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGtrdaaLAGLAM--LLAHALFKAALFLVVGIIDHS 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 89 lSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVV----CLSWVNFLIFFLYFISTGLTASYSFR 164
Cdd:PRK12644 346 -TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLR 424
|
...
gi 406044698 165 LFY 167
Cdd:PRK12644 425 FLW 427
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
14-136 |
3.41e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 72.94 E-value: 3.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 14 WFLLL--VGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYY-------GLAFFHLLTHALFKALLFMCAGS 84
Cdd:PRK12649 277 WFILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepglgvAAATFHLLNHATFKACLFLVAGI 356
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 406044698 85 MIHNLSdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 136
Cdd:PRK12649 357 VAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-172 |
5.93e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 71.67 E-value: 5.93e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 3 FSPMLLT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGL---------------AFFH 67
Cdd:PRK08376 277 YGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGLAALgdpamasygeialagGIYH 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 68 LLTHALFKALLFMCAGSMIHNLSdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLswVNFLI 147
Cdd:PRK08376 357 IVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL--FNPIL 433
|
170 180
....*....|....*....|....*
gi 406044698 148 FFLYFISTGLTASYSFRLFYYSMMG 172
Cdd:PRK08376 434 GVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
15-130 |
6.25e-14 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 71.86 E-value: 6.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 15 FLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFMCAGSMIHNlSDSQD 94
Cdd:PRK07390 286 VLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQD 364
|
90 100 110
....*....|....*....|....*....|....*.
gi 406044698 95 IRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYS 130
Cdd:PRK07390 365 LTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
2-138 |
1.57e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 70.72 E-value: 1.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 2 RFSPML-LT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGL---AFFHLLTHALFKAL 77
Cdd:PRK12647 247 RLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGA 326
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 406044698 78 LFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVV 138
Cdd:PRK12647 327 LFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEAL 386
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
14-165 |
2.93e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 69.80 E-value: 2.93e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 14 WFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYG---LAFFHLLTHALFKALLFMCAGSMIHNLS 90
Cdd:PRK08377 274 KLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLG 353
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 406044698 91 DSQDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeVVCLSWVNFLIFFLYFISTGLTASYSFRL 165
Cdd:PRK08377 354 GTEIEKFEGLGKR-MPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
12-136 |
4.21e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 66.29 E-value: 4.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 12 YGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSM----GYYGL----------AFFHLLTHALFKAL 77
Cdd:PRK08667 269 WGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifGVYGLdtlallalggALFHSLNHALFKSL 348
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 406044698 78 LFMCAGSMIHNLSDsQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 136
Cdd:PRK08667 349 LFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
12-128 |
1.26e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 64.85 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 12 YGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLA--------------FFHLLTHALFKAL 77
Cdd:PRK08042 244 WGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSV 323
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 406044698 78 LFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGF 128
Cdd:PRK08042 324 LFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-201 |
1.59e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.45 E-value: 1.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 13 GWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMM---SILSMGYYGLAFFHLLTHALFKALLFMCAGSmIHNL 89
Cdd:PRK06589 280 FNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSL 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 90 SDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLS---WVNFLIFFLYFISTGLTASYSFRLF 166
Cdd:PRK06589 359 KKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKIL 438
|
170 180 190
....*....|....*....|....*....|....*
gi 406044698 167 YysmmgdNNFYPSYffdDKSYFISFGMIGLLFVAV 201
Cdd:PRK06589 439 S------SIYKPSL---SENSFITKSLPYLMQISV 464
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
13-167 |
2.18e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 64.25 E-value: 2.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 13 GWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLG-LMMSILSMGYYGLA--FFHLLTHALFKALLFMCAGSMIHNL 89
Cdd:PRK08668 272 NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGyILVGLGLGTSLGFAggLFHVFNHALFKGLFFLIFAAVIYRT 351
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 406044698 90 SDSQdIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVcLSWVNFLIFFLYFISTGLTASYSFRLFY 167
Cdd:PRK08668 352 GTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-172 |
5.94e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.79 E-value: 5.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLL---T*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLM-MSILSMGYYGL--AFFHLLTHALF 74
Cdd:COG1008 260 LRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLI 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 75 KALLFMCAGsMIHNLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILevVCLSWVNFLIFFLYFIS 154
Cdd:COG1008 340 TAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNPWLAILAALG 416
|
170
....*....|....*...
gi 406044698 155 TGLTASYSFRLFYYSMMG 172
Cdd:COG1008 417 LILTAAYLLWMYQRVFFG 434
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
13-141 |
8.66e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 62.21 E-value: 8.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 13 GWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMsiLSMGY------YGL----------AFFHLLTHALFKA 76
Cdd:PRK06521 276 GVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIF--VGLGLamvfiaYGMpllaalaltaALYHLLNHALFKS 353
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 406044698 77 LLFMCAGSMIHNLSdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLS 141
Cdd:PRK06521 354 LLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-136 |
2.75e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 60.74 E-value: 2.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 18 LVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGyyglAFFHLlTHALFKALLFMCAGSmIHNLSDSQDIRF 97
Cdd:PRK07234 250 IFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAGA-LPSRNFTELISQ 323
|
90 100 110
....*....|....*....|....*....|....*....
gi 406044698 98 MGSIVNFMPLTsvcfnVSSLSLCGMPFLAGFYSKDLILE 136
Cdd:PRK07234 324 MLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
2-244 |
3.08e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 60.66 E-value: 3.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 2 RFSPMLLT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFMC 81
Cdd:MTH00063 209 RYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFML 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 82 AGSMIHNLSDSQDIR-----FMGSIVNFMPLTSVCfnvssLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYFISTG 156
Cdd:MTH00063 289 VGDVMSGSGGSQSSNcvyssILYGSWNLFYLFLLV-----LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVF 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 157 LTASYSFRLFYYSMMGDNNFYPSYFFDdksYFISFGMigllfvaVFGGSFLSWLIFP-VPYMIVLPWYLSFLTFFVVIVG 235
Cdd:MTH00063 364 LSYLYSFRLCLILFGVKSSLSSGVRFL---FFNSGLM-------VFLWLFINYYVFLlLDEVVYLGVFISLVLLLVQLLG 433
|
....*....
gi 406044698 236 SYLGYLISD 244
Cdd:MTH00063 434 LLVGVLFYD 442
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
13-135 |
4.74e-10 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 59.99 E-value: 4.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 13 GWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGL------AFFHLLTHALFKALLFMCAGSMI 86
Cdd:PRK06525 272 GYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALS 351
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 406044698 87 HNLSdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 135
Cdd:PRK06525 352 YSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
22-135 |
5.12e-10 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 59.91 E-value: 5.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 22 MTVFMAGLGANF---EFD*KSIIALSTLSQLGLMMSILSMGY-YGL--AFFHLLTHALFKALLFMCAGSMIHNLSDSqDI 95
Cdd:PRK12668 246 IGAAMAVYGVFFallENDLRRLLSYHIVSQVGYMVAGIGIGTaLAIngAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KL 324
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 406044698 96 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 135
Cdd:PRK12668 325 TELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-84 |
7.85e-10 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 59.33 E-value: 7.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 1 IRFSPMLLT*NYG-WFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLF 79
Cdd:PRK08168 250 IRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAF 329
|
....*
gi 406044698 80 MCAGS 84
Cdd:PRK08168 330 LSASE 334
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-178 |
1.15e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 58.81 E-value: 1.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 15 FLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLM-MSILSMGYYGL--AFFHLLTHALFKALLFMCAGSMIHnLSD 91
Cdd:PRK07691 277 LILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIlVGVAMMTESGMigAIYYLIHDMIVKAALFLLIGIMIK-ITG 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 92 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVcLSWVNFLIFFLYFISTGLTASYSFRLFYYSMM 171
Cdd:PRK07691 356 TTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGT-FEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFW 434
|
....*..
gi 406044698 172 GDNNFYP 178
Cdd:PRK07691 435 GEPKGYD 441
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
14-173 |
2.90e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 54.44 E-value: 2.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 14 WFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLG-LMMSILSMGYYGL--AFFHLLTHALFKALLFMCAGSMIHNLS 90
Cdd:PRK05846 278 PIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLH 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 91 dSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILevVCLSWVNFLIFFLYFISTGLTASYSFRLFYYSM 170
Cdd:PRK05846 358 -TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLILAAVYSLWLYQRVM 434
|
...
gi 406044698 171 MGD 173
Cdd:PRK05846 435 FGP 437
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-138 |
8.61e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 50.12 E-value: 8.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 6 MLLT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMG-YYGL--AFFHLLTHALFKALLFMCA 82
Cdd:PRK12662 272 VFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVS 351
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 406044698 83 GSMIHNLsDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVV 138
Cdd:PRK12662 352 GSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAF 406
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
2-84 |
9.77e-06 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 46.57 E-value: 9.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 2 RFSPmLLT*NYGWFLLLVGCMTVFMAGLGANF-EFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFM 80
Cdd:PRK08601 255 RFSP-LFHDDIAQILLLIFASISVLIGTGISLvQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFL 333
|
....
gi 406044698 81 CAGS 84
Cdd:PRK08601 334 QSGS 337
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
16-175 |
6.06e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.17 E-value: 6.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 16 LLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGL---AFFHLLTHALFKALLFMCAGSMIHnLSDS 92
Cdd:PRK12663 275 LATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGY 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 93 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVcLSWVNFLIFFLYFIsTGLTASYS-FRLFYYSMM 171
Cdd:PRK12663 354 RSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGA-LDNGAYILLALMLI-TSLITMYSlFRIFFLAYW 431
|
....
gi 406044698 172 GDNN 175
Cdd:PRK12663 432 GDKD 435
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-136 |
1.52e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 43.03 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 15 FLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGY---YGLAFFHLLTHALFKALLFMCAGsMIHNLSD 91
Cdd:PRK12665 275 LLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAG 353
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 406044698 92 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 136
Cdd:PRK12665 354 SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
16-135 |
1.94e-04 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 42.61 E-value: 1.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 16 LLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYyGLAFF----HLLTHALFKALLFMCAGSMIHNlSD 91
Cdd:PRK06458 284 LLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGG-PLGIFaallHMLNHSLTKSAIFFASGNVLQK-YG 361
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 406044698 92 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 135
Cdd:PRK06458 362 TRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-212 |
3.87e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 41.64 E-value: 3.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 16 LLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGY-----YGLAFFHLLTHALFKALLFMCAGSMIhNLS 90
Cdd:PRK12664 204 LLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVI-NRT 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 91 DSQDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLYF--ISTGLTASYSFRLFYY 168
Cdd:PRK12664 283 RKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWY 361
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 406044698 169 SMMGDNNFYPSYffdDKSYFIS-FGMIGLLFVAVFGGSFLSWLIF 212
Cdd:PRK12664 362 AFISKSKSKPEA---EKVYIGSkLSMIILVLICVVLGMFNSYLLF 403
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
16-166 |
9.45e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.51 E-value: 9.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 16 LLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAF---FHLLTHALFKALLFMCAGsMIHNLSDS 92
Cdd:PRK08676 276 LIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRS 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 406044698 93 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL-EVVCLS-WVNFLIFFLYFISTGLTASYSFRLF 166
Cdd:PRK08676 355 DRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
6-212 |
1.99e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 39.42 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 6 MLLT*NYGWFLLLVGCMTVFMAGLGANFEFD*KSIIALSTLSQLGLMMSILSMGYYGLAFFHLLTHALFKALLFMCAGSM 85
Cdd:MTH00160 136 LLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFN 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 86 IHNLSDSQDIRFMGSIVNFMpltsvcFNVSSLSLCGMPFLAGFYSKDLILEVVCLSWVNFLIFFLyFISTGLTASYSFRL 165
Cdd:MTH00160 216 IFFLNQLFNSNNKSKKIKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFIL-IMSSLITLYFYLRI 288
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 406044698 166 FYYSMMGdNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIF 212
Cdd:MTH00160 289 SYSSLML-NYNKNKWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
36-131 |
2.50e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 39.33 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 406044698 36 D*KSIIALSTLSQLG-LMMSILSMGYYGL--AFFHLLTHALFKALLFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSVCF 112
Cdd:COG1007 292 NVKRMLAYSSIAHAGyLLLGLAAGTPLGVsaALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAM 371
|
90
....*....|....*....
gi 406044698 113 NVSSLSLCGMPFLAGFYSK 131
Cdd:COG1007 372 TIFLLSLAGIPPTAGFFGK 390
|
|
|