|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-243 |
6.19e-106 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 309.83 E-value: 6.19e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLST 80
Cdd:MTH00112 53 TEAATKYFLTQAAASALILFSSTTNAWNTGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILST 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 81 LMKLPPTTILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLMT 160
Cdd:MTH00112 133 WQKLAPLTLLLMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMT 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 161 TSIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFF 240
Cdd:MTH00112 213 TPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFF 292
|
...
gi 407259461 241 YLR 243
Cdd:MTH00112 293 YLR 295
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-243 |
1.49e-92 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 275.92 E-value: 1.49e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLST 80
Cdd:MTH00135 53 VEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILST 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 81 LMKLPPTtILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLMT 160
Cdd:MTH00135 133 WQKLAPF-ALILQIAPTNPTLLITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMT 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 161 TSIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFF 240
Cdd:MTH00135 212 SSAFLTFKLNSSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYF 291
|
...
gi 407259461 241 YLR 243
Cdd:MTH00135 292 YLR 294
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-243 |
1.77e-89 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 267.94 E-value: 1.77e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLST 80
Cdd:MTH00070 53 TEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILST 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 81 LMKLPPTTILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLMT 160
Cdd:MTH00070 133 WQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMT 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 161 TSIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFF 240
Cdd:MTH00070 213 SSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFF 292
|
...
gi 407259461 241 YLR 243
Cdd:MTH00070 293 YLR 295
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-243 |
6.48e-81 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 245.91 E-value: 6.48e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLST 80
Cdd:MTH00105 53 TEAATKYFLTQATASMLLMMAIIINLMYSGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLT 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 81 LMKLPPTTILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLMT 160
Cdd:MTH00105 133 WQKLAPLSILYQISPSINPNLLLTLAILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMT 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 161 TSIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFF 240
Cdd:MTH00105 213 LTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYF 292
|
...
gi 407259461 241 YLR 243
Cdd:MTH00105 293 YMR 295
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-243 |
5.23e-66 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 207.86 E-value: 5.23e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLST 80
Cdd:MTH00041 53 VEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIAT 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 81 LMKLPPTTILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLMT 160
Cdd:MTH00041 133 WQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIIN 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 161 TSIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFF 240
Cdd:MTH00041 213 TSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFF 292
|
...
gi 407259461 241 YLR 243
Cdd:MTH00041 293 YLR 295
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-243 |
4.97e-62 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 197.88 E-value: 4.97e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLST 80
Cdd:MTH00200 53 VEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILST 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 81 LMKLPPTTILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLMT 160
Cdd:MTH00200 133 WQKLAPFALLIQLAPALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIIT 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 161 TSIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFF 240
Cdd:MTH00200 213 LTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFF 292
|
...
gi 407259461 241 YLR 243
Cdd:MTH00200 293 YLR 295
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
2-243 |
3.11e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 143.81 E-value: 3.11e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 2 EATTKYFLTQAAASTLLLFSSMINAWFTGqwditqLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTL 81
Cdd:MTH00160 55 ESSLKYFLIQALASIILLFSIILNMLNLM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTW 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 82 MKLPPttiLLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLMTT 161
Cdd:MTH00160 129 QKIAP---LILLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 162 SIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFFY 241
Cdd:MTH00160 206 SIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFY 285
|
..
gi 407259461 242 LR 243
Cdd:MTH00160 286 LR 287
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-242 |
5.91e-35 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 126.92 E-value: 5.91e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITqltyppscLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLST 80
Cdd:MTH00144 53 SESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLT 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 81 LMKLPPT-TILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLM 159
Cdd:MTH00144 125 WQKVAPLfLLSNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVS 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 160 TTSIFLTLSTTNTLKLSTlMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLF 239
Cdd:MTH00144 205 SGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLF 283
|
...
gi 407259461 240 FYL 242
Cdd:MTH00144 284 FYL 286
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-242 |
1.15e-33 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 123.74 E-value: 1.15e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSminawfTGQWDITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLST 80
Cdd:MTH00011 55 SEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILST 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 81 LMKLPPTTILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLMT 160
Cdd:MTH00011 129 WQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIIT 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 161 TSIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFF 240
Cdd:MTH00011 209 TPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFY 288
|
..
gi 407259461 241 YL 242
Cdd:MTH00011 289 YL 290
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
1-243 |
4.09e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 108.99 E-value: 4.09e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAwftgqwdITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLST 80
Cdd:MTH00197 47 NEGAMKYFLFQEFGSALLLMGGSLSF-------SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLAT 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 81 LMKLPPttILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTLMT 160
Cdd:MTH00197 120 WQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIM 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 161 TSIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFF 240
Cdd:MTH00197 198 FMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYY 277
|
...
gi 407259461 241 YLR 243
Cdd:MTH00197 278 YLS 280
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-243 |
1.36e-23 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 98.26 E-value: 1.36e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 2 EATTKYFLTQAAASTLLLF-SSMINAwFTGQWDITQL--------TYPP----SCLLLTTAIAIKLGLTPFHFWFPEVLQ 68
Cdd:COG1007 153 EAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIaaalaaggANSPllllGLVLVLAGLAFKLSAVPFHMWTPDVYE 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 69 GSslttalllstlmklpPTTI-------------------LLLTSHSLSP---TLLTTMSMMSIALGGWMGLNQTQTRKI 126
Cdd:COG1007 232 GA---------------PTPVtaflatapkiaafaallrlLVEAFPGLAAdwqLLLAVLAVLSMTVGNLAALAQTNVKRM 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 127 LAFSSISHLGWMTMIIIYNPKLTL--LTFYM--YTLMTTSIFLTLS-----TTNTLKLSTLMTSWTKTPTLNTTLMITLL 197
Cdd:COG1007 297 LAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILllsrkGGEAEEIEDLAGLARRSPLLALAMTIFLL 376
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 407259461 198 SLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFFYLR 243
Cdd:COG1007 377 SLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLR 422
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
2-243 |
6.15e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 92.79 E-value: 6.15e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 2 EATTKYFLTQAAASTLLLFS-------------SMINAWFTGQWDITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQ 68
Cdd:MTH00196 44 EAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 69 GSSLTTALLLSTLMKLPPTTILLltSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII----IY 144
Cdd:MTH00196 124 GAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFE 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 145 NPKLTLLTFYMYTLMTTSIFLTLSTTNTLK--LSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQE 222
Cdd:MTH00196 202 SIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQ 281
|
250 260
....*....|....*....|.
gi 407259461 223 MTTTATIAALLSLLGLFFYLR 243
Cdd:MTH00196 282 YYLIFLLAVFCSVIAGVYYVR 302
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
2-243 |
2.93e-21 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 91.81 E-value: 2.93e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 2 EATTKYFLTQAAASTLLLF-SSMINAwFTGQWDITQL--------TYPP----SCLLLTTAIAIKLGLTPFHFWFPEVLQ 68
Cdd:PRK05777 154 EAAIKYFVLGALASGFLLYgMSLLYG-ATGSLSFAGIakaladgsGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYE 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 69 GSSLTTALLLSTLMKL----PPTTILLLTSHSLSPT---LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMI 141
Cdd:PRK05777 233 GAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVG 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 142 IIYNPKLTL--LTFYM--YTLMTTSIF--LTLSTTNTLKLSTLmTSWT----KTPTLNTTLMITLLSLAGLPPLTGFLPK 211
Cdd:PRK05777 313 LAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGGEAESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGK 391
|
250 260 270
....*....|....*....|....*....|..
gi 407259461 212 WLIIQELTKQEMTTTATIAALLSLLGLFFYLR 243
Cdd:PRK05777 392 FYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLR 423
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
1-243 |
9.61e-20 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 87.31 E-value: 9.61e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQLTYPPSC------------LLLTTAIAIKLGLTPFHFWFPEVLQ 68
Cdd:TIGR01770 152 TEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYE 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 69 GSSLTTALLLSTLMKL----PPTTILLLTSHSLSPT---LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMI 141
Cdd:TIGR01770 232 GAPTPVTAFFSIVPKIaifaVFLRLFLYILFGFSEAwqiFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 142 IIYNPKLTL--LTFY--MYTLMTTSIFLTLSTTNTLK------LSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPK 211
Cdd:TIGR01770 312 LLAGTLEGIkaVLFYifIYALMSLGAFGVLSLLRSYKdewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGK 391
|
250 260 270
....*....|....*....|....*....|..
gi 407259461 212 WLIIQELTKQEMTTTATIAALLSLLGLFFYLR 243
Cdd:TIGR01770 392 FYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR 423
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-216 |
2.34e-18 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 81.98 E-value: 2.34e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQL-----------TYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQG 69
Cdd:pfam00361 32 SEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEG 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 70 SSLTTALLLSTLMKLPPTTILLLTSHSLSPT------LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII- 142
Cdd:pfam00361 112 APTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALg 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 143 ---IYNPKLTLLTFYMYTLMTTSIFL-----TLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLI 214
Cdd:pfam00361 192 agtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLI 271
|
..
gi 407259461 215 IQ 216
Cdd:pfam00361 272 LA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
2-243 |
1.82e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 75.05 E-value: 1.82e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 2 EATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQLTYPPSC----LLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALL 77
Cdd:MTH00199 148 EAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINSILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTAL 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 78 LSTLMKLPPTTILLLTSHSLSPTLLTtmSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNP----KLTLLTF 153
Cdd:MTH00199 228 LATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYM 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 154 YMYTLMTT---SIFLTLSTTNTLKLSTLMTSwTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIA 230
Cdd:MTH00199 306 IIYVIMSIcsfSIILSLKLTKGLIVEVSGLS-RKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIA 384
|
250
....*....|...
gi 407259461 231 ALLSLLGLFFYLR 243
Cdd:MTH00199 385 VLSSVIAGVYYVR 397
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-243 |
4.88e-15 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 73.64 E-value: 4.88e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQL-----TYPPS-----CLLLTTAIAIKLGLTPFHFWFPE----- 65
Cdd:COG0651 156 LRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaELDPGlllaaFALLLVGFGIKAALFPLHFWLPDaypaa 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 66 ------VLQGSSLTTALLLSTLMKlppTTILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMT 139
Cdd:COG0651 236 pspvsaLLSGLLTKVGVYAILRVL---TLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIL 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 140 MII-IYNPK-LTLLTFYM--YTLMTTSIFLT----LSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPK 211
Cdd:COG0651 313 LGLgLGTPLgLAGALFHLlnHALAKALLFLAagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSK 392
|
250 260 270
....*....|....*....|....*....|..
gi 407259461 212 WLIIQELTKQEMTTTATIAALLSLLGLFFYLR 243
Cdd:COG0651 393 WLLLQAALEAGAWLLAAVLLLSSLLTLAYFVR 424
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
44-243 |
4.02e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 71.04 E-value: 4.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 44 LLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLppTTILLLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQT 123
Cdd:MTH00198 303 LFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRI 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 124 RKILAFSSISHLGWMTMII-------IYNPKLTLLTFYMYTLMTTSIFLTLSTTNTL------------------KLSTL 178
Cdd:MTH00198 381 KRLLAYSGIGHIGFILIGVsagtyesLQASWTYAVTYLVSALASFTVICTLEEFGTRtptsrqrdgsfgnynlvrRLVDL 460
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 407259461 179 MTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGL-------FFYLR 243
Cdd:MTH00198 461 TILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVALFAIictcisaFYYIR 532
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
2-243 |
1.89e-12 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 66.18 E-value: 1.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 2 EATTKYFLTQAAASTLLLFS-SMINAWFTGQWDI---------TQLTYPPSCLL----LTTAIAIKLGLTPFHFWFPEVL 67
Cdd:CHL00049 162 EATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVY 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 68 QGSSLTTALLLSTLMK---LPPTTILLLTSHSLSPT----LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTM 140
Cdd:CHL00049 242 EGSPTPVVAFLSVTSKvaaSALATRIFDIPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVII 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 141 -IIIYNPKLTLLTfyMYTLMTTSIFLTLSTTNTLKLSTLMT----------SWTKTPTLNTTLMITLLSLAGLPPLTGFL 209
Cdd:CHL00049 322 gIIVGDSNDGYAS--MITYMLFYIFMNLGTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALCLLSLGGIPPLAGFF 399
|
250 260 270
....*....|....*....|....*....|....
gi 407259461 210 PKWLIIQELTKQEMTTTATIAALLSLLGLFFYLR 243
Cdd:CHL00049 400 GKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLK 433
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-242 |
9.95e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 55.00 E-value: 9.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 2 EATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQ----LTYPPS-------CLLLTTAIAIKLGLTPFHFWFPE----- 65
Cdd:PRK08668 147 KASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADisqgLINDTStgfalivFLFLLAFGVAKAGIFPLHVWAPDaysea 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 66 ------VLQGSSLTT-ALLLSTLMKLPPTTILLLT-----SHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSIS 133
Cdd:PRK08668 227 pqsfsaVLSGQLSKLgAYGFLLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 134 HLGWmtmIIIYNPKLTLLTF-------YMYTLMTTSIFLTLST----TNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGL 202
Cdd:PRK08668 307 NGGY---ILVGLGLGTSLGFagglfhvFNHALFKGLFFLIFAAviyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGI 383
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 407259461 203 PPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGlFFYL 242
Cdd:PRK08668 384 PPMSGFASKWLIFEALISKGMPITAFMAFFGSIGS-FLYV 422
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-240 |
1.93e-08 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 54.32 E-value: 1.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQW-----DITQLTYPPS-----CLLLTTAIAIKLGLTPFHFWFPEVLQGS 70
Cdd:COG1008 160 IYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDAHVEA 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 71 SlttalllstlmklPPTTILL---------------------LTSHSLSPTLLTtMSMMSIALGGWMGLNQTQTRKILAF 129
Cdd:COG1008 240 P-------------TAGSVLLagvllkmggygllrfalplfpEASAYFAPLLAA-LGVIGIIYGALVALAQTDLKRLIAY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 130 SSISHLGWMTM-IIIYNPK-LTLLTFYM--YTLMTTSIFLTL----STTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAG 201
Cdd:COG1008 306 SSVSHMGFVLLgIFALNPLgLQGAVLQMvsHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
250 260 270
....*....|....*....|....*....|....*....
gi 407259461 202 LPPLTGFLPKWLIIQELTKqemttTATIAALLSLLGLFF 240
Cdd:COG1008 386 LPGTSGFVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
1-237 |
2.39e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 53.79 E-value: 2.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLfSSMINAWFTGQW-----DITQLTYPPSC-----LLLTTAIAIKLGLTPFHFWFPEV-LQG 69
Cdd:TIGR01972 155 IYAAMKFFLYTLAGSLLML-LAILGLYFLGGGtfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhVEA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 70 SSLTTALLLSTLMKLPPTTILLL-------TSHSLSPtLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII 142
Cdd:TIGR01972 234 PTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 143 IYNPKLTLL--TFYMYT--LMTTSIFLTLST----TNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLI 214
Cdd:TIGR01972 313 FSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLI 392
|
250 260
....*....|....*....|...
gi 407259461 215 IQElTKQEMTTTATIAALLSLLG 237
Cdd:TIGR01972 393 LLG-SFKVNPVVAFLAALGIVLA 414
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
2-211 |
4.49e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 53.13 E-value: 4.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 2 EATTKYFLTQAAASTLLLF-SSMINAWFTGQWDIT----QLTYPPSCLLLTT------AIAIKLGLTPFHFWFPEVLQGS 70
Cdd:PRK02504 161 EAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSaialALITSPSLGLALAlvfviaGIAFKISAVPFHQWTPDVYEGS 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 71 SLTTALLLSTLMKLPPTTI---LLLTSHSLSPT----LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIII 143
Cdd:PRK02504 241 PTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLV 320
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 407259461 144 YNPK--LTLLTFYM--YTLMT----TSIFLTLSTTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPK 211
Cdd:PRK02504 321 AGTEagYASMVFYLlaYLFMNlgafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
30-240 |
9.19e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 52.08 E-value: 9.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 30 GQWDITQLTYPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGsslttalllstlmklpPTTI---------------LLLTS 94
Cdd:COG1009 201 APTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG----------------PTPVsallhaatmvkagvyLLARL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 95 H---SLSPTLLTTMS---MMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIiynpKLTLLTFYMYTLMTTSIF---- 164
Cdd:COG1009 265 SplfALSPVWLTVVAiigAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL----GVGAYVAALFHLLTHAFFkall 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 165 --------LTLSTTNTLKLSTLmtsWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTkqEMTTTATIAALLSLL 236
Cdd:COG1009 341 flgagsviHATGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAAL--EAGGLGPLLLAVALL 415
|
....
gi 407259461 237 GLFF 240
Cdd:COG1009 416 GAFL 419
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
45-243 |
3.49e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 50.26 E-value: 3.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 45 LLTTAIAIKLGLTPFHFWFPE-----------VLQGSSLTTALLLSTLMKLPPTTILLLTSHSLSPTLLTTMSMmSIALG 113
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRaypaappvvtaLLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVLALL-SMLVG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 114 GWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLL--TFYM--YTLMTTSIFLTL----STTNTLKLSTLMTSWTKT 185
Cdd:PRK08375 286 SLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAgaieVTYGTRRLSELSGLGRRM 365
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 407259461 186 PTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFFYLR 243
Cdd:PRK08375 366 PLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLR 423
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
46-211 |
5.64e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.04 E-value: 5.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 46 LTTAIAIKLGLT--------PFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLSPT-----LLTTMSMMSIAL 112
Cdd:PRK12650 206 LTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 113 GGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYT----LMTTSIFLTLST----TNTLKLSTLMTSWTK 184
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIGVvdhqAGTRDIRRLGSLWRR 365
|
170 180
....*....|....*....|....*..
gi 407259461 185 TPTLNTTLMITLLSLAGLPPLTGFLPK 211
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-243 |
7.96e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 46.10 E-value: 7.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 96 SLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYT----LMTTSIFLTL---- 167
Cdd:PRK07691 272 SFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLLIgimi 351
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 407259461 168 ---STTNTLKLSTLMTSWtktPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSLLGLFFYLR 243
Cdd:PRK07691 352 kitGTTDLKKMGGLIKRY---PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIK 427
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
29-211 |
3.86e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 44.53 E-value: 3.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 29 TGQWDITQL-TYPPSCLLLTTAIAI-------KLGLTPFHFWFPEVLQGSSLTTALLLSTLM---------KLPPTtilL 91
Cdd:PRK12644 184 AGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---F 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 92 LTSHSLSPTLLTtMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMII-IYNPKLTLLTFYM---YTLMTTSIFLTL 167
Cdd:PRK12644 261 ADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMllaHALFKAALFLVV 339
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 407259461 168 S----TTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPK 211
Cdd:PRK12644 340 GiidhSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
100-215 |
4.90e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 43.95 E-value: 4.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 100 TLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMY----TLMTTSIFLTLSTT----N 171
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfG 359
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 407259461 172 TLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLII 215
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
39-214 |
4.91e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 44.14 E-value: 4.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 39 YPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLSPT-----LLTTMSMMSIALG 113
Cdd:PRK12647 194 YLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTG 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 114 GWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMY----TLMTTSIFLTLST----TNTLKLSTLMTSWTKT 185
Cdd:PRK12647 274 ALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAM 353
|
170 180
....*....|....*....|....*....
gi 407259461 186 PTLNTTLMITLLSLAGLPPLTGFLPKWLI 214
Cdd:PRK12647 354 PITAAAALLAALSMAGLPPLFGFLAKELI 382
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-214 |
1.52e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 42.39 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSminAWFTGQWDITQLTYPPSCL-------------LLTTAIAIKLGLTPFHFW----F 63
Cdd:PRK08376 171 IEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAVKMsenptvvakialaLFIAGLAMKSGAVPVHMWlpdaY 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 64 PEVLQGSSLTTALLLSTLMKLPPTTILLLTSHSLSPT----LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWM- 138
Cdd:PRK08376 248 PAAPSSISAMLLVIKQAGLYALARVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMl 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 139 -----TMIIIYNPKLT----------LLTFYMYTLMTTSIFLT-------LSTTNTLKLSTLMTSWTKTptlNTTLMITL 196
Cdd:PRK08376 328 lglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTagaviyeTGTRNLNELGGLARTMPKT---TIAFLIGA 404
|
250
....*....|....*...
gi 407259461 197 LSLAGLPPLTGFLPKWLI 214
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLI 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-215 |
2.99e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 41.34 E-value: 2.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWF----TGQWDITQLTYPPSCLLLTT--------AIAIKLGLTPFHFWFPE--- 65
Cdd:PRK05846 160 IYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPDahv 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 66 --------VLQGSSLTTALLLSTLMKLPpttILLLTSHSLSPtLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGW 137
Cdd:PRK05846 240 qaptagsvLLAGILLKMGAYGLLRFSLP---LFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 138 MTM-IIIYNPK-LTLLTFYM--YTLMTTSIFLTLST----TNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFL 209
Cdd:PRK05846 316 VTLgIFAGNQLgIQGAIFQMisHGLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFV 395
|
....*.
gi 407259461 210 PKWLII 215
Cdd:PRK05846 396 GEFLIL 401
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
101-234 |
1.53e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.40 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 101 LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLL----------TFYMYTLMTTSIFLTLSTT 170
Cdd:PRK12648 273 IVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVaaifhiinhaTFKASLFMAAGIIDHETGT 352
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 407259461 171 NTL-KLSTLMTSWTKTPTLNttlMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTT--------ATIAALLS 234
Cdd:PRK12648 353 RDMrRLSGLRRLMPITATLA---MVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSldwllpvaATLAGAFS 422
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
100-216 |
1.85e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 39.16 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 100 TLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTM-IIIYNPK-LTLLTFYMYTLMT--TSIFLTLSTTNTL-- 173
Cdd:PRK12663 273 PLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgLALGTPAgINGAIFYLVHDMVvkTALFLIAGSLVRLtg 352
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 407259461 174 --KLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQ 216
Cdd:PRK12663 353 yrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
39-220 |
2.27e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.97 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 39 YPPSCLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTIL-----LLTSHSLSPTLLTTMSMMSIALG 113
Cdd:PRK12646 209 FIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLfrftpLLGLSNMYIYIVTFVGLITMLFG 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 114 GWMGLNQTQTRKILAFSSISHLGW-MTMI-----IIYNPKLTLLTFY-------MYTLMTTSIF---------LTLSTTN 171
Cdd:PRK12646 289 SITALKQWDLKGILAYSTISQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgIIDHEAG 368
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 407259461 172 TLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTK 220
Cdd:PRK12646 369 TRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-211 |
2.31e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.04 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 1 IEATTKYFLTQAAASTLLLFSSMINAWFTGQWDITQLTYPPSC--------LLLTTAIAIKLGLT------PFHFWFPEV 66
Cdd:PRK12649 161 VYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFYIWLPNA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 67 LQGSSLTTALLLSTLMKLPPTTILLLTSHSLSPT-----LLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMI 141
Cdd:PRK12649 241 MEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTM 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 142 IIYNPK------LTLLTFYMYTLMTTSIFLTL---------STTNTLKLSTLMTSWTKTPTLNTtlmITLLSLAGLPPLT 206
Cdd:PRK12649 321 YGYTTYhepglgVAAATFHLLNHATFKACLFLvagivaheaATRDIRKLGGLRKEMPITFIVAS---IAALAMAGIPPLN 397
|
....*
gi 407259461 207 GFLPK 211
Cdd:PRK12649 398 GFLSK 402
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-216 |
2.34e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 38.79 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 59 FHFWFPEVLQGSSLTTALLLSTLMKLPPTTIL-----LLTSHSLSPTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSIS 133
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 134 HLGWMTMIIIYNPKLTLLTFYMYTLMTTSIFLTLS--------TTNTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPL 205
Cdd:MTH00032 324 QLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSagsvihstTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYL 403
|
170
....*....|.
gi 407259461 206 TGFLPKWLIIQ 216
Cdd:MTH00032 404 TGFYSKDLILE 414
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
49-215 |
3.18e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 38.36 E-value: 3.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 49 AIAIKLGLTPFHFWFPE-----------VLQGSSLTTALLLSTLMKLPpttILLLTSHSLSPTLLtTMSMMSIALGGWMG 117
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKahveapvagsvLLAGILLKLGGYGLVRLSWP---ILPLGAQNLAPAVI-AMGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 118 LNQTQTRKILAFSSISHLGWMTMIIIYNPKLTLLTFYMYTL---MTTSIFLTLSTTNTLKLSTLMTSWTK-----TPTLN 189
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWG 394
|
170 180
....*....|....*....|....*.
gi 407259461 190 TTLMITLLSLAGLPPLTGFLPKWLII 215
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
44-220 |
3.48e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.27 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 44 LLLTTAIAIKLGLTPFHFWFPEV-LQGSSLTTALLLSTLMKLPPTTILLLTSHSLSPTL-----LTTMSMMSIALGGWMG 117
Cdd:PRK08042 184 LLGVIGFGLLAGIIPLHGWVPQAhANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 118 LNQTQTRKILAFSSISHLG--------WMTMIIIYNPKLTLLTFY--MYTLMTTSIFLTL---------STTNTLKLSTL 178
Cdd:PRK08042 264 LMEHNIQRLLAYHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKL 343
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 407259461 179 MTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTK 220
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-216 |
3.87e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 38.03 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 44 LLLTTAIAIKLGLTPFHFWFPE-----------VLQGSSLTTALLLSTLmklppTTILLLTSHSLSpTLLTTMSMMSIAL 112
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLTKVGVYAIIR-----THTLLFPGGGLD-TLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 113 GGWMGLNQTQTRKILAFSSISHLGWMTM-IIIYNPK-LTLLTFYM--YTLMTTSIFLTLS-------TTNTLKLSTLMTS 181
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFgIALSTVAgLSGAIYYVahHITVQTTLFLVVGlierqagSSSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|....*
gi 407259461 182 wtkTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQ 216
Cdd:PRK12665 367 ---SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
99-216 |
4.55e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 37.99 E-value: 4.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 99 PTLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKL----TLLTFYMYTLMTTSIFLT----LSTT 170
Cdd:PRK06458 281 GRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAIFFAsgnvLQKY 360
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 407259461 171 NTLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQ 216
Cdd:PRK06458 361 GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
43-216 |
8.92e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 36.98 E-value: 8.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 43 CLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTTILLLTS--HSLSPTLL---TTMSMMSIALGGWMG 117
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplFEQAPLALiivTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 118 LNQTQTRKILAFSSISHLGWMTMIIiynpKLTLLTFYMYTLMTTSIF---LTLSTTNTL----------KLSTLMTSwtk 184
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFkalLFLSAGSVIhalsdeqdmrKMGGLISF--- 365
|
170 180 190
....*....|....*....|....*....|..
gi 407259461 185 TPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQ 216
Cdd:MTH00020 366 LPLTYIFFLIGSLSLMGFPYLTGFYSKDLILE 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
100-235 |
9.12e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 36.93 E-value: 9.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 407259461 100 TLLTTMSMMSIALGGWMGLNQTQTRKILAFSSISHLGWMTMIIIYNPKLT----LLTFYMYTLMTTSIFLTLST----TN 171
Cdd:PRK06277 267 GVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLGAGIvsyrTK 346
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 407259461 172 TLKLSTLMTSWTKTPTLNTTLMITLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIAALLSL 235
Cdd:PRK06277 347 TSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSI 410
|
|
| |
