|
Name |
Accession |
Description |
Interval |
E-value |
| PHA02624 |
PHA02624 |
large T antigen; Provisional |
1-672 |
0e+00 |
|
large T antigen; Provisional
Pssm-ID: 222912 [Multi-domain] Cd Length: 647 Bit Score: 1087.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 1 MDKFLSREESLELMDLLQIPRHCYGNFALMKINHKKMSLKYHPDKGGDPEKMSRLNQLWQKLQEGIYNARQEFPTsfssq 80
Cdd:PHA02624 1 MDKTLSREESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSARQSFGT----- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 81 hdvptQDGRDIPPYGHPSWASWWESFNQEWDnlfdtmqdPDLFCHESTIPSDESRSPSPTPgpstqfseensrrrraaPP 160
Cdd:PHA02624 76 -----QDSSEIPTYGTPEWEQWWEEFNEKWD--------EDLFCDEELSSSDDEDEPPPPS-----------------PP 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 161 EDSPGCTQSSFSATPPKPKKskYDSVPNDFPDMLRPFLSNAVYSNKTLSSFLIYTTNEKAEYLYKKLD-KFNPEFKSRHS 239
Cdd:PHA02624 126 PSQEEESQSSSQATPPKKKK--KNPAPNDFPSCLLAFLSHAIFSNKTLTCFLIYTTKEKAELLYKKLLeKFNPTFISRHS 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 240 FQEGSMVFLMTPGKHRVSAIKNLCVTHCTVSFLLCKAVIKQVECYRCMCSEPFKLLEESKP-GIFEYEFNEEN-GKPVVN 317
Cdd:PHA02624 204 YDGGALLFIITPGKHRVSAVNNFCKKHCTVSFLICKGVKKEYELYSALCRDPFKLLEESIPgGLKEYEFNPEEeEEKQVN 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 318 WNLLTDFAVTNRLDDPLLIMAHYLDFAEEPSICSKCTKKALKAHYNYHSLHHKNAKLFKECKTQKTACQQAADVVMAKQR 397
Cdd:PHA02624 284 WKLITDFALETNCDDVLLLLGLYLEFAVPPEECKKCQKKKLKTHFKYHEKHHENAKLFLDSKNQKTICQQAVDGVLAKRR 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 398 LKLIESTRKELLEERFKLMFEKLTDEF-GQIKILQYMAGVAWYSCLFENIDEVVTKILKLIVENVPKKRNCLFRGPINSG 476
Cdd:PHA02624 364 VKLLTMTREELLAERFKKLLDKMDEIFkGSVDILQYMAGVAWLHCLLPNFDDVIYDILKLIVENVPKRRYWLFKGPVNSG 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 477 KTTFAAALMNFLGGKTLNVNCPADKLPFELGCAIDQFVVIFEDVKGQIALNKKLQPGQGVSNLDNLRDHLDGSVKVNLER 556
Cdd:PHA02624 444 KTTLAAALLDLCGGKSLNVNCPPDKLNFELGCAIDQFMVVFEDVKGQPADNKDLPSGQGMNNLDNLRDYLDGSVPVNLEK 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 557 KHVNKRSQIFPPCLVTMNEYLLPETIFTRFAYVLNFTPKHNLRSCLQVSDYLLTERILQDGVTIALLLVWYCPITMFSES 636
Cdd:PHA02624 524 KHLNKRSQIFPPGIVTMNEYLIPQTVKARFAKVLDFKPKPYLKKSLKKNEYLLEKRILQSGETLLLLLIWYRPVEDFAEE 603
|
650 660 670
....*....|....*....|....*....|....*.
gi 573464740 637 IKEDVKYWKDILCKYMGHTNFATLLLNVEEGKDPLD 672
Cdd:PHA02624 604 IQEKVVTWKERLDKEVSDTTFATMKENIHEGKDPLE 639
|
|
| Polyoma_lg_T_C |
pfam06431 |
Polyomavirus large T antigen C-terminus; |
316-672 |
2.20e-141 |
|
Polyomavirus large T antigen C-terminus;
Pssm-ID: 283968 Cd Length: 417 Bit Score: 420.15 E-value: 2.20e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 316 VNWNLLTDFAVTNRLDDPLLIMAHYLDFAEEPSICSKCTKKALKAHYNYHSLHHKNAKLFKECKTQKTACQQAADVVMAK 395
Cdd:pfam06431 4 VSWKLVTEYAMETKCEDVFLLLGMYLEFQYNFEMCKKCIKKDQPSHFKYHEKHYANAAIFADSKNQKSICQQAVDTVLAK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 396 QRLKLIESTRKELLEERFKLMFEKLTDEFG---QIKILQYMAGVAWYSCLFENIDEVVTKILKLIVENVPKKRNCLFRGP 472
Cdd:pfam06431 84 KRVDSLHMTREEMLTERFNDLLDKMDLIFGahgNAVLEQYMAGVAWLHCLLPKMDSVIYDFLKCIVYNIPKKRYWLFKGP 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 473 INSGKTTFAAALMNFLGGKTLNVNCPADKLPFELGCAIDQFVVIFEDVKGQIALNKKLQPGQGVSNLDNLRDHLDGSVKV 552
Cdd:pfam06431 164 IDSGKTTLAAALLDLCGGKALNVNLPLERLNFELGVAIDQFMVVFEDVKGTGAESRDLPSGHGINNLDNLRDYLDGSVKV 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 553 NLERKHVNKRSQIFPPCLVTMNEYLLPETIFTRFAYVLNFTPKHNLRSCLQVSDYLLTERILQDGVTIALLLVWYCPITM 632
Cdd:pfam06431 244 NLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVRQIDFRPKDYLRKSLERSEFLLEKRILQSGMTLLLLLIWFRPVAD 323
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 573464740 633 FSESIKEDVKYWKDILCKYMGHTNFATLLLNVEEGKDPLD 672
Cdd:pfam06431 324 FAQSIQSRIVEWKERLDKEISMYTFSKMKFNVAMGIGILD 363
|
|
| DnaJ |
smart00271 |
DnaJ molecular chaperone homology domain; |
12-63 |
2.15e-07 |
|
DnaJ molecular chaperone homology domain;
Pssm-ID: 197617 [Multi-domain] Cd Length: 60 Bit Score: 48.00 E-value: 2.15e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 573464740 12 ELMDLLQIPRHCygNFALMKINHKKMSLKYHPDKGGDP-----EKMSRLNQLWQKLQ 63
Cdd:smart00271 2 DYYEILGVPRDA--SLDEIKKAYRKLALKYHPDKNPGDkeeaeEKFKEINEAYEVLS 56
|
|
| DnaJ |
cd06257 |
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ... |
12-62 |
3.58e-04 |
|
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Pssm-ID: 99751 [Multi-domain] Cd Length: 55 Bit Score: 39.07 E-value: 3.58e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 573464740 12 ELMDLLQIPRHCygNFALMKINHKKMSLKYHPDKGGD----PEKMSRLNQLWQKL 62
Cdd:cd06257 1 DYYDILGVPPDA--SDEEIKKAYRKLALKYHPDKNPDdpeaEEKFKEINEAYEVL 53
|
|
| CbpA |
COG2214 |
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription]; |
34-80 |
4.90e-03 |
|
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
Pssm-ID: 441816 [Multi-domain] Cd Length: 91 Bit Score: 36.62 E-value: 4.90e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 573464740 34 HKKMSLKYHPDKGGDP-----EKMSRLNQLWQKLQEgiYNARQEFPTSFSSQ 80
Cdd:COG2214 26 YRRLAKLLHPDRGGELkalaeELFQRLNEAYEVLSD--PERRAEYDRELGQS 75
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA02624 |
PHA02624 |
large T antigen; Provisional |
1-672 |
0e+00 |
|
large T antigen; Provisional
Pssm-ID: 222912 [Multi-domain] Cd Length: 647 Bit Score: 1087.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 1 MDKFLSREESLELMDLLQIPRHCYGNFALMKINHKKMSLKYHPDKGGDPEKMSRLNQLWQKLQEGIYNARQEFPTsfssq 80
Cdd:PHA02624 1 MDKTLSREESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSARQSFGT----- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 81 hdvptQDGRDIPPYGHPSWASWWESFNQEWDnlfdtmqdPDLFCHESTIPSDESRSPSPTPgpstqfseensrrrraaPP 160
Cdd:PHA02624 76 -----QDSSEIPTYGTPEWEQWWEEFNEKWD--------EDLFCDEELSSSDDEDEPPPPS-----------------PP 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 161 EDSPGCTQSSFSATPPKPKKskYDSVPNDFPDMLRPFLSNAVYSNKTLSSFLIYTTNEKAEYLYKKLD-KFNPEFKSRHS 239
Cdd:PHA02624 126 PSQEEESQSSSQATPPKKKK--KNPAPNDFPSCLLAFLSHAIFSNKTLTCFLIYTTKEKAELLYKKLLeKFNPTFISRHS 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 240 FQEGSMVFLMTPGKHRVSAIKNLCVTHCTVSFLLCKAVIKQVECYRCMCSEPFKLLEESKP-GIFEYEFNEEN-GKPVVN 317
Cdd:PHA02624 204 YDGGALLFIITPGKHRVSAVNNFCKKHCTVSFLICKGVKKEYELYSALCRDPFKLLEESIPgGLKEYEFNPEEeEEKQVN 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 318 WNLLTDFAVTNRLDDPLLIMAHYLDFAEEPSICSKCTKKALKAHYNYHSLHHKNAKLFKECKTQKTACQQAADVVMAKQR 397
Cdd:PHA02624 284 WKLITDFALETNCDDVLLLLGLYLEFAVPPEECKKCQKKKLKTHFKYHEKHHENAKLFLDSKNQKTICQQAVDGVLAKRR 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 398 LKLIESTRKELLEERFKLMFEKLTDEF-GQIKILQYMAGVAWYSCLFENIDEVVTKILKLIVENVPKKRNCLFRGPINSG 476
Cdd:PHA02624 364 VKLLTMTREELLAERFKKLLDKMDEIFkGSVDILQYMAGVAWLHCLLPNFDDVIYDILKLIVENVPKRRYWLFKGPVNSG 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 477 KTTFAAALMNFLGGKTLNVNCPADKLPFELGCAIDQFVVIFEDVKGQIALNKKLQPGQGVSNLDNLRDHLDGSVKVNLER 556
Cdd:PHA02624 444 KTTLAAALLDLCGGKSLNVNCPPDKLNFELGCAIDQFMVVFEDVKGQPADNKDLPSGQGMNNLDNLRDYLDGSVPVNLEK 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 557 KHVNKRSQIFPPCLVTMNEYLLPETIFTRFAYVLNFTPKHNLRSCLQVSDYLLTERILQDGVTIALLLVWYCPITMFSES 636
Cdd:PHA02624 524 KHLNKRSQIFPPGIVTMNEYLIPQTVKARFAKVLDFKPKPYLKKSLKKNEYLLEKRILQSGETLLLLLIWYRPVEDFAEE 603
|
650 660 670
....*....|....*....|....*....|....*.
gi 573464740 637 IKEDVKYWKDILCKYMGHTNFATLLLNVEEGKDPLD 672
Cdd:PHA02624 604 IQEKVVTWKERLDKEVSDTTFATMKENIHEGKDPLE 639
|
|
| Polyoma_lg_T_C |
pfam06431 |
Polyomavirus large T antigen C-terminus; |
316-672 |
2.20e-141 |
|
Polyomavirus large T antigen C-terminus;
Pssm-ID: 283968 Cd Length: 417 Bit Score: 420.15 E-value: 2.20e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 316 VNWNLLTDFAVTNRLDDPLLIMAHYLDFAEEPSICSKCTKKALKAHYNYHSLHHKNAKLFKECKTQKTACQQAADVVMAK 395
Cdd:pfam06431 4 VSWKLVTEYAMETKCEDVFLLLGMYLEFQYNFEMCKKCIKKDQPSHFKYHEKHYANAAIFADSKNQKSICQQAVDTVLAK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 396 QRLKLIESTRKELLEERFKLMFEKLTDEFG---QIKILQYMAGVAWYSCLFENIDEVVTKILKLIVENVPKKRNCLFRGP 472
Cdd:pfam06431 84 KRVDSLHMTREEMLTERFNDLLDKMDLIFGahgNAVLEQYMAGVAWLHCLLPKMDSVIYDFLKCIVYNIPKKRYWLFKGP 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 473 INSGKTTFAAALMNFLGGKTLNVNCPADKLPFELGCAIDQFVVIFEDVKGQIALNKKLQPGQGVSNLDNLRDHLDGSVKV 552
Cdd:pfam06431 164 IDSGKTTLAAALLDLCGGKALNVNLPLERLNFELGVAIDQFMVVFEDVKGTGAESRDLPSGHGINNLDNLRDYLDGSVKV 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 553 NLERKHVNKRSQIFPPCLVTMNEYLLPETIFTRFAYVLNFTPKHNLRSCLQVSDYLLTERILQDGVTIALLLVWYCPITM 632
Cdd:pfam06431 244 NLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVRQIDFRPKDYLRKSLERSEFLLEKRILQSGMTLLLLLIWFRPVAD 323
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 573464740 633 FSESIKEDVKYWKDILCKYMGHTNFATLLLNVEEGKDPLD 672
Cdd:pfam06431 324 FAQSIQSRIVEWKERLDKEISMYTFSKMKFNVAMGIGILD 363
|
|
| T_Ag_DNA_bind |
pfam02217 |
Origin of replication binding protein; This domain of large T antigen binds to the SV40 origin ... |
188-279 |
3.91e-40 |
|
Origin of replication binding protein; This domain of large T antigen binds to the SV40 origin of DNA replication.
Pssm-ID: 280395 Cd Length: 94 Bit Score: 142.06 E-value: 3.91e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 188 NDFPDMLRPFLSNAVYSNKTLSSFLIYTTNEKAEYLYKKL-DKFNPEFKSRHSFQEGSMVFLMTPGKHRVSAIKNLCVTH 266
Cdd:pfam02217 1 IDFPADLEAYLSHAISSNKTPNCFLIYTTKEKLQQLYPKLmEKFSPTFHSLAHWGGGYALFIITPTKHRVSAVKNFCKKH 80
|
90
....*....|...
gi 573464740 267 CTVSFLLCKAVIK 279
Cdd:pfam02217 81 CTVSFLIVKGVKK 93
|
|
| PHA03102 |
PHA03102 |
Small T antigen; Reviewed |
7-80 |
7.54e-27 |
|
Small T antigen; Reviewed
Pssm-ID: 222986 [Multi-domain] Cd Length: 153 Bit Score: 106.68 E-value: 7.54e-27
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 573464740 7 REESLELMDLLQIPRHCYGNFALMKINHKKMSLKYHPDKGGDPEKMSRLNQLWQKLQEGIYNARQE-FPTSFSSQ 80
Cdd:PHA03102 1 REESKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRDLdGEEDSSSE 75
|
|
| DnaJ |
smart00271 |
DnaJ molecular chaperone homology domain; |
12-63 |
2.15e-07 |
|
DnaJ molecular chaperone homology domain;
Pssm-ID: 197617 [Multi-domain] Cd Length: 60 Bit Score: 48.00 E-value: 2.15e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 573464740 12 ELMDLLQIPRHCygNFALMKINHKKMSLKYHPDKGGDP-----EKMSRLNQLWQKLQ 63
Cdd:smart00271 2 DYYEILGVPRDA--SLDEIKKAYRKLALKYHPDKNPGDkeeaeEKFKEINEAYEVLS 56
|
|
| PHA02774 |
PHA02774 |
E1; Provisional |
454-574 |
2.60e-06 |
|
E1; Provisional
Pssm-ID: 222927 [Multi-domain] Cd Length: 613 Bit Score: 50.66 E-value: 2.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 454 LKLIVENVPKKrNCL-FRGPINSGKTTFAAALMNFLGGKTLNvncpadklpfelgcaidqFVvifedvkgqialNKK--- 529
Cdd:PHA02774 424 LKDFLKGIPKK-NCLvIYGPPDTGKSMFCMSLIKFLKGKVIS------------------FV------------NSKshf 472
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 573464740 530 -LQPGQG--VSNLD------------NLRDHLDGSVkVNLERKHvnkRS--QI-FPPCLVTMN 574
Cdd:PHA02774 473 wLQPLADakIALLDdathpcwdyidtYLRNALDGNP-VSIDCKH---KApvQIkCPPLLITSN 531
|
|
| DnaJ |
cd06257 |
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ... |
12-62 |
3.58e-04 |
|
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Pssm-ID: 99751 [Multi-domain] Cd Length: 55 Bit Score: 39.07 E-value: 3.58e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 573464740 12 ELMDLLQIPRHCygNFALMKINHKKMSLKYHPDKGGD----PEKMSRLNQLWQKL 62
Cdd:cd06257 1 DYYDILGVPPDA--SDEEIKKAYRKLALKYHPDKNPDdpeaEEKFKEINEAYEVL 53
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
448-594 |
8.00e-04 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 40.59 E-value: 8.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 448 EVVTKILKLIVENvPKKRNCLFRGPINSGKTTFAAALMNFL---GGKTLNVNCPADKLPFELGCAIDqfvviFEDVKGQI 524
Cdd:cd00009 4 EEAIEALREALEL-PPPKNLLLYGPPGTGKTTLARAIANELfrpGAPFLYLNASDLLEGLVVAELFG-----HFLVRLLF 77
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 573464740 525 ALNKKLQPgqGVSNLDNLrDHLDGSVKVNLER--KHVNKRSQIFPPCLV-----TMNEYLLPETIFTRFAYVLNFTP 594
Cdd:cd00009 78 ELAEKAKP--GVLFIDEI-DSLSRGAQNALLRvlETLNDLRIDRENVRVigatnRPLLGDLDRALYDRLDIRIVIPL 151
|
|
| CbpA |
COG2214 |
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription]; |
34-80 |
4.90e-03 |
|
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
Pssm-ID: 441816 [Multi-domain] Cd Length: 91 Bit Score: 36.62 E-value: 4.90e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 573464740 34 HKKMSLKYHPDKGGDP-----EKMSRLNQLWQKLQEgiYNARQEFPTSFSSQ 80
Cdd:COG2214 26 YRRLAKLLHPDRGGELkalaeELFQRLNEAYEVLSD--PERRAEYDRELGQS 75
|
|
| PTZ00037 |
PTZ00037 |
DnaJ_C chaperone protein; Provisional |
6-64 |
6.90e-03 |
|
DnaJ_C chaperone protein; Provisional
Pssm-ID: 240236 [Multi-domain] Cd Length: 421 Bit Score: 39.42 E-value: 6.90e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 573464740 6 SRE-ESLELMDLLQIPRHCygNFALMKINHKKMSLKYHPDKGGDPEKMSRLNQLWQKLQE 64
Cdd:PTZ00037 22 KREvDNEKLYEVLNLSKDC--TTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSD 79
|
|
| DnaJ |
pfam00226 |
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ... |
15-62 |
7.25e-03 |
|
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.
Pssm-ID: 395170 [Multi-domain] Cd Length: 63 Bit Score: 35.53 E-value: 7.25e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 573464740 15 DLLQIPRHCygNFALMKINHKKMSLKYHPDK-GGDP---EKMSRLNQLWQKL 62
Cdd:pfam00226 4 EILGVSPDA--SDEEIKKAYRKLALKYHPDKnPGDPeaeEKFKEINEAYEVL 53
|
|
| |
