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Conserved domains on  [gi|583829397|gb|AHI51876|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Humphaplotropis culaishanensis (nomen nudum)]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
5-310 1.81e-143

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 406.46  E-value: 1.81e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   5 LFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  85 LMISLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 165 SFNMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 583829397 245 TLIFMGGDFYSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
5-310 1.81e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 406.46  E-value: 1.81e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   5 LFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  85 LMISLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 165 SFNMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 583829397 245 TLIFMGGDFYSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
22-302 9.68e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 280.13  E-value: 9.68e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   22 SVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMISLLVWVIFPYLTYM 101
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  102 --CSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMNYQLYCW 179
Cdd:pfam00146  92 vlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  180 FIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMGG------DF 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpfpLP 251
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 583829397  254 YSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 252 GLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
4-311 8.68e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 265.84  E-value: 8.68e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   4 DLFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVF 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  84 SLMISLLVWVIFPYLTYMC--SFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 162 LIGSFNMVDFMNYQ-LYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 241 SMLMTLIFMGG-------DFYSFI-----FFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFFIFFVGLKV 308
Cdd:COG1005  247 SALATTLFLGGwlgpfpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325

                 ...
gi 583829397 309 LLI 311
Cdd:COG1005  326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
5-310 1.81e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 406.46  E-value: 1.81e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   5 LFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  85 LMISLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 165 SFNMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 583829397 245 TLIFMGGDFYSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
7-307 7.64e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 354.34  E-value: 7.64e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   7 MFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLM 86
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  87 ISLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 167 NMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTL 246
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 583829397 247 IFMGGDFY--SFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLK 307
Cdd:MTH00225 242 LFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIIL 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
22-306 4.01e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 329.52  E-value: 4.01e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  22 SVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMISLLVWVIFPYLTYM 101
Cdd:MTH00143  17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 102 CSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMNYQLYCWFI 181
Cdd:MTH00143  97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 182 IFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMGGDF-----YSF 256
Cdd:MTH00143 177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSvlfllGGV 256
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 583829397 257 IFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00143 257 VFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
5-310 3.43e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 296.65  E-value: 3.43e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   5 LFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  85 LMISLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 165 SFNMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 583829397 245 TLIFMGGDfYSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00195 241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
9-313 1.66e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 294.90  E-value: 1.66e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   9 VLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMIS 88
Cdd:MTH00218   5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  89 LLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNM 168
Cdd:MTH00218  85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 169 VDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIF 248
Cdd:MTH00218 165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 583829397 249 MGGDFYSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLLISI 313
Cdd:MTH00218 245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
7-313 1.69e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 295.38  E-value: 1.69e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   7 MFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLM 86
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  87 ISLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 167 NMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTL 246
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 583829397 247 IFMGG-------DFYSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLLISI 313
Cdd:MTH00104 241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
5-313 9.26e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 288.44  E-value: 9.26e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   5 LFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFS 84
Cdd:MTH00071   4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  85 LMISLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00071  84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 165 SFNMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00071 164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 583829397 245 TLIFMGGDFY-------SFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLLISI 313
Cdd:MTH00071 244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
22-306 1.23e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 285.64  E-value: 1.23e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  22 SVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMISLLVWVIFPYLTYM 101
Cdd:MTH00111  21 AVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPL 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 102 CSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMNYQLYCWFI 181
Cdd:MTH00111 101 ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLI 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 182 IFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFM-------GGDFY 254
Cdd:MTH00111 181 FSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLnpstlnlPPELF 260
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 583829397 255 SFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00111 261 TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSM 312
NADHdh pfam00146
NADH dehydrogenase;
22-302 9.68e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 280.13  E-value: 9.68e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   22 SVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMISLLVWVIFPYLTYM 101
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  102 --CSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMNYQLYCW 179
Cdd:pfam00146  92 vlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  180 FIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMGG------DF 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpfpLP 251
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 583829397  254 YSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 252 GLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
8-311 5.62e-92

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 275.89  E-value: 5.62e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   8 FVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMI 87
Cdd:MTH00010   5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  88 SLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFN 167
Cdd:MTH00010  85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 168 MVDFMNYQlYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLI 247
Cdd:MTH00010 165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 583829397 248 FMGGDFYSFI----FFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLLI 311
Cdd:MTH00010 244 FTSFIPSIFIsdlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
3-310 2.59e-91

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 274.55  E-value: 2.59e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   3 YDLFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPV 82
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  83 FSLMISLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 163 IGSFNMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:MTH00040 161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 583829397 243 LMTLIFMGGDFYSFIFF--------MKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLL 310
Cdd:MTH00040 241 LSVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
1-313 4.97e-90

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 271.48  E-value: 4.97e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   1 MLYDLFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFS 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  81 PVFSLMISLLVWVIFPYLTYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 161 ILIGSFNMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 241 SMLMTLIFMGGDFY-------SFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKVLLISI 313
Cdd:MTH00134 241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
4-311 8.68e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 265.84  E-value: 8.68e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   4 DLFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVF 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  84 SLMISLLVWVIFPYLTYMC--SFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 162 LIGSFNMVDFMNYQ-LYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 241 SMLMTLIFMGG-------DFYSFI-----FFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFFIFFVGLKV 308
Cdd:COG1005  247 SALATTLFLGGwlgpfpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325

                 ...
gi 583829397 309 LLI 311
Cdd:COG1005  326 LLF 328
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 6.62e-82

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 250.49  E-value: 6.62e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   5 LFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFS 84
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  85 LMISLLVWVIFPYLTY--MCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076  89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 163 IGSFNMVDFMNYQLYCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:PRK06076 169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 583829397 243 LMTLIFMGGdFYSFI-----------FFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076 249 LITTLFLGG-WLPPFplgggipgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
22-306 5.04e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 248.49  E-value: 5.04e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  22 SVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMISLLVWVIFPYLT-- 99
Cdd:MTH00054  18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEgv 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 100 YMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMNYQLYCW 179
Cdd:MTH00054  98 VLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 180 FIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMGGDFYSFI-- 257
Cdd:MTH00054 178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGpt 257
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 583829397 258 --------FFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00054 258 syfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
1-306 5.68e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 248.50  E-value: 5.68e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397   1 MLYDLFMFVLNFLLLLICILISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFS 80
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  81 PVFSLMISLLVWVIFPYL--TYMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 159 LIILIGSFNMVDFMNYQL-YCWFIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSI 237
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 583829397 238 IFMSMLMTLIFMGG--------DFYSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00216 241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
22-306 3.17e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 213.73  E-value: 3.17e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  22 SVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMISLLVWVIFPYL--T 99
Cdd:MTH00029  23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDqgV 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 100 YMCSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMNYQLYCW 179
Cdd:MTH00029 103 FLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 180 FIIFSFPLGLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMGG-------- 251
Cdd:MTH00029 183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGwlspldgi 262
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 252 ---------------DFYSFIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00029 263 ptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
22-308 6.89e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 195.50  E-value: 6.89e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  22 SVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMISLLVWVIFPYLTYM 101
Cdd:MTH00090  12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 102 CSFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMNYQLYCWFI 181
Cdd:MTH00090  92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSFSLSLFVIYL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 182 IFsfplglscFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMGgdfYSFIFFMk 261
Cdd:MTH00090 172 PF--------LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK---FSFLMLF- 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 583829397 262 lgFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKV 308
Cdd:MTH00090 240 --LIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
23-304 2.88e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 163.17  E-value: 2.88e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  23 VAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSPVFSLMISLLVWVIFPYLTYMC 102
Cdd:MTH00058  18 VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGS 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 103 SFPYGFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMnyqLYCWFII 182
Cdd:MTH00058  98 YSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFY---YSGWLSV 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 183 FSFPLGLSCFASC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMGGDFYSFIFFMK 261
Cdd:MTH00058 175 LLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIMLLFH 254
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 583829397 262 LGFlafcFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFV 304
Cdd:MTH00058 255 LLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
30-297 1.21e-30

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 118.52  E-value: 1.21e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  30 ERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLVCSEQPIPILSNYLLYYFSP---VFSLMISLLVwVIFPYLTYMCSFPY 106
Cdd:CHL00032  51 EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPsiaVISILLSYLV-IPFGYHLVLADLSI 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 107 GFLFFLCCTSFGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMN----YQLYCW--- 179
Cdd:CHL00032 130 GVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEaqskYGFWGWnlw 209
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 180 -----FIIFsfplglscFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMGG--- 251
Cdd:CHL00032 210 rqpigFIVF--------LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGwnl 281
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 583829397 252 --------DFYS--------------FIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:CHL00032 282 sipyifipELFEinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
25-304 6.52e-21

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 90.63  E-value: 6.52e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397  25 FLTLFERKILGYIQIRKGPnkvgfvGIPQPFSDAIKLVCSEQPIPILSNyLLYYFSPVFSLMISLLVWVIFPYLTYMCSF 104
Cdd:COG0650   20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLAALLVPVLTTGPPL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 105 PYGFLFFLCCTSFGVYTV--MIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVDFMNYQLYCWFII 182
Cdd:COG0650   93 SFSGDLIVLVYLLALARFflALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAHGPLL 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 583829397 183 FSFPL---GLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMGGDFYS---- 255
Cdd:COG0650  173 LSPSLllaAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALtlll 252
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 583829397 256 --FIFFMKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFV 304
Cdd:COG0650  253 alLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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