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Conserved domains on  [gi|671760151|gb|AII98757|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Pachylemur jullyi]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 7.57e-69

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 201.71  E-value: 7.57e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   1 MNLPLALMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 671760151  81 TTNPKLTLTMALILVSILAAGLAYEWIQKGLEWME 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 7.57e-69

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 201.71  E-value: 7.57e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   1 MNLPLALMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 671760151  81 TTNPKLTLTMALILVSILAAGLAYEWIQKGLEWME 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 5.02e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 102.89  E-value: 5.02e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   18 VTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTNPKLT-LTMALILVS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 671760151   97 ILAAGLAYEWIQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 8.14e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.17  E-value: 8.14e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   3 LPLALM--TSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA-S 79
Cdd:COG0838    6 LPILIFllVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAvV 83

                         90       100       110
                 ....*....|....*....|....*....|....
gi 671760151  80 QTTNPKLTLTMALILVSILAAGLAYEWIQKGLEW 113
Cdd:COG0838   84 FRELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 7.57e-69

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 201.71  E-value: 7.57e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   1 MNLPLALMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 671760151  81 TTNPKLTLTMALILVSILAAGLAYEWIQKGLEWME 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 1.64e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 153.15  E-value: 1.64e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   1 MNLPLALMT-SIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136   1 MNLITTILTiTIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 671760151  80 QTTNPKLTLTMALILVSILAAGLAYEWIQKGLEWME 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 3.95e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 147.06  E-value: 3.95e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   3 LPLALMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTT 82
Cdd:MTH00069   2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 671760151  83 NPKLTLTMALILVSILAAGLAYEWIQKGLEWME 115
Cdd:MTH00069  82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-114 2.60e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 142.33  E-value: 2.60e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   1 MNLPLALMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 671760151  81 TTNPKLTLTMALILVSILAAGLAYEWIQKGLEWM 114
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 2.29e-39

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 127.41  E-value: 2.29e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   1 MNLPLALMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 671760151  81 TTNPKLTLTMALILVSILAAGLAYEWIQKGLEWME 115
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 10-113 5.38e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 113.45  E-value: 5.38e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151  10 SIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNPklTLT 89
Cdd:MTH00203  11 ALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL--SLL 88

                         90       100
                 ....*....|....*....|....
gi 671760151  90 MALILVSILAAGLAYEWIQKGLEW 113
Cdd:MTH00203  89 LAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 5.02e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 102.89  E-value: 5.02e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   18 VTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTNPKLT-LTMALILVS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 671760151   97 ILAAGLAYEWIQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 5-115 6.76e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 100.70  E-value: 6.76e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   5 LALMTSIILTLLLVTIAFWLPQLNVY-TEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTN 83
Cdd:MTH00148   6 LSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSF 85

                         90       100       110
                 ....*....|....*....|....*....|..
gi 671760151  84 PKLTLTMALILVSILAAGLAYEWIQKGLEWME 115
Cdd:MTH00148  86 SVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 7-113 5.25e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 96.00  E-value: 5.25e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   7 LMTSIILTLLLVTIAFWL-PQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNPK 85
Cdd:MTH00161   6 LLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMM 85

                         90       100
                 ....*....|....*....|....*...
gi 671760151  86 LTLTMALILVSILAAGLAYEWIQKGLEW 113
Cdd:MTH00161  86 SWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 7-115 6.41e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 93.13  E-value: 6.41e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   7 LMTSIILTLLLVTIAFWLPQLNVYT-EKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNPK 85
Cdd:MTH00202   8 SILSILISSLLFLVSWMLSFRSLMDrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSK 87

                         90       100       110
                 ....*....|....*....|....*....|
gi 671760151  86 LTLTMALILVSILAAGLAYEWIQKGLEWME 115
Cdd:MTH00202  88 GGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 8.14e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.17  E-value: 8.14e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   3 LPLALM--TSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA-S 79
Cdd:COG0838    6 LPILIFllVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAvV 83

                         90       100       110
                 ....*....|....*....|....*....|....
gi 671760151  80 QTTNPKLTLTMALILVSILAAGLAYEWIQKGLEW 113
Cdd:COG0838   84 FRELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 5-113 3.60e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 83.75  E-value: 3.60e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   5 LALMTSIILTLLLVTIAFWLPQLNVYT-EKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTN 83
Cdd:MTH00012   6 IPMMISLILPPLVLGAAWVLAARSTADrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTST 85

                         90       100       110
                 ....*....|....*....|....*....|
gi 671760151  84 PKLTLTMALILVSILAAGLAYEWIQKGLEW 113
Cdd:MTH00012  86 SKTVVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 5-113 4.23e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 83.61  E-value: 4.23e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   5 LALMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNP 84
Cdd:MTH00055  10 ILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGL 89

                         90       100
                 ....*....|....*....|....*....
gi 671760151  85 KLTLTMALILVsILAAGLAYEWIQKGLEW 113
Cdd:MTH00055  90 FGFWVMYLFLI-ILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-113 2.69e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 81.26  E-value: 2.69e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   1 MNLPLALMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 671760151  81 TTNPKLTLTMALILVsILAAGLAYEWIQKGLEW 113
Cdd:MTH00018  81 QIAPFGFWTMVGFLF-ILTLGLIYEWIKGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-113 9.04e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 77.60  E-value: 9.04e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   7 LMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA-SQTTNPK 85
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAvSFREIGW 92

                         90       100
                 ....*....|....*....|....*...
gi 671760151  86 LTLTMALILVSILAAGLAYEWIQKGLEW 113
Cdd:PRK06602  93 LGFVEAMIFILVLLVGLVYLWRKGALDW 120
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 8-113 1.25e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.96  E-value: 1.25e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   8 MTSIILTLLLVTIAFWLPQLNVY-----TEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTT 82
Cdd:MTH00030  13 LLGVGIILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQL 92

                         90       100       110
                 ....*....|....*....|....*....|.
gi 671760151  83 NpKLTLTMALILVSILAAGLAYEWIQKGLEW 113
Cdd:MTH00030  93 N-LFSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-113 6.70e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 54.99  E-value: 6.70e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   7 LMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTNPKL 86
Cdd:CHL00022  14 LIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91

                         90       100
                 ....*....|....*....|....*...
gi 671760151  87 TLTM-ALILVSILAAGLAYEWIQKGLEW 113
Cdd:CHL00022  92 SAFIeALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
7-114 2.48e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 53.59  E-value: 2.48e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   7 LMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPlpWASQTTNPKL 86
Cdd:PRK07756  16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGL 93

                         90       100
                 ....*....|....*....|....*....
gi 671760151  87 -TLTMALILVSILAAGLAYEWIQKGLEWM 114
Cdd:PRK07756  94 fALIEMLIFVVMLLVGLAYAWKKKVLQWL 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-113 2.01e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 51.21  E-value: 2.01e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151  33 KYSPYECGFDPMSSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQTTNPKL--TLTMALILVSILAAgLAYEWIQ 108
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVfgLVEMALFMLTVFVA-YAYVWRR 113


                 ....*
gi 671760151 109 KGLEW 113
Cdd:PRK07928 114 GGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-114 2.71e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 45.27  E-value: 2.71e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151   1 MNLPLALMTSIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLpwasq 80
Cdd:MTH00092   2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----- 76

                         90       100       110
                 ....*....|....*....|....*....|....
gi 671760151  81 TTNPKLTLTMALILVSILAAGLAYEWIQKGLEWM 114
Cdd:MTH00092  77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIWV 110
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
33-113 2.02e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 40.81  E-value: 2.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 671760151  33 KYSPYECGFDPMSSARlPFSMKFFLVAITFLLFDLEIALLlpLPWAsqtTNPKLTLTMALI----LVSILAAGLAYEWIQ 108
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA---VDFKLLGLFGLIemllFIVLLTIGFIYAWKK 120


                 ....*
gi 671760151 109 KGLEW 113
Cdd:PRK08489 121 GALEW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-76 3.72e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.88  E-value: 3.72e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 671760151  34 YSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060  38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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