|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
7.11e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 210.00 E-value: 7.11e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00165 313 GSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYS 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSYLI 160
Cdd:MTH00165 393 FRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYEL 472
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 699976673 161 MKFDLMEN--AFKGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKYLQLVDLGWN 213
Cdd:MTH00165 473 SLMSLSYNlkSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWS 527
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
3.55e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 160.20 E-value: 3.55e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00209 309 GNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYS 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSYLI 160
Cdd:MTH00209 389 MRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMV 468
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 699976673 161 MKFDLMenAFKGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKYLQLVDLGWN 213
Cdd:MTH00209 469 LKKNFF--LIKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWV 519
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-212 |
2.46e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 149.92 E-value: 2.46e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00207 313 GSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYS 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSYLI 160
Cdd:MTH00207 393 TRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLF 472
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 699976673 161 MKFDLMENAF-KGYKMKSFIG-SMWFMPMISTKWISFMPLKLGLKYLQLVDLGW 212
Cdd:MTH00207 473 TTPNITKTPLlINNPLSHFAScLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGW 526
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-212 |
2.73e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 149.61 E-value: 2.73e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00151 310 GSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYS 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSylI 160
Cdd:MTH00151 390 ARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLS--F 467
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 699976673 161 MKFDLMENAFKGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKYLQLVDLGW 212
Cdd:MTH00151 468 GFWDSGFSSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGW 519
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
8.89e-32 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 121.21 E-value: 8.89e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00211 338 GSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYS 417
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPS-PLVIILPSWMKLLTLMVTLVGGWLSYL 159
Cdd:MTH00211 418 FRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLE 497
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 699976673 160 IMKFdlmENAFKGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKY-LQLVDLGWN 213
Cdd:MTH00211 498 LVNL---THKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLsTHLMDLGWY 549
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
3.10e-27 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 108.13 E-value: 3.10e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00208 370 GSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYS 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPlVIILPSWMKLLTLMVTLVGGWLSYLI 160
Cdd:MTH00208 450 FRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSF 528
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 699976673 161 MKFdLMENAFKgYKMKSFIGSMWFMPMISTKWISFMPLKLGLKY-LQLVDLGWN 213
Cdd:MTH00208 529 LLS-LSSNPIN-SNFFSFLSNQWFFVNISHSIIISFSFFTSLFGsTRTLDRGWS 580
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-188 |
3.97e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 104.99 E-value: 3.97e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00066 341 GSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYS 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGY-LMGFKySFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPS-PLVIILPSWMKLLTLMVTLVGGWLSY 158
Cdd:MTH00066 421 FRIIYFsSMKFP-RSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIAL 499
|
170 180 190
....*....|....*....|....*....|
gi 699976673 159 LIMKfdLMENAFKGYKMKSFIGSMWFMPMI 188
Cdd:MTH00066 500 DLAK--ITSKTTPKTKMHSFSNLLAFFPTI 527
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-212 |
5.11e-26 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 104.86 E-value: 5.11e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00004 343 GSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYS 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGY-LMGFkYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPS-PLVIILPSWMKLLTLMVTLVGgwlSY 158
Cdd:MTH00004 423 LRMILLvQTGF-PRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILG---IL 498
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 699976673 159 LIMKFDLMENAF---KGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKY-LQLVDLGW 212
Cdd:MTH00004 499 LALELSNMTTTLtppKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIaTHLIDLSW 556
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
79-213 |
9.30e-26 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 98.39 E-value: 9.30e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 79 YTFRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSY 158
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 699976673 159 LIMKFDL-MENAFKGYKMKSFIGSMWFMPMISTKWISFMPLKLGLKYLQLVDLGWN 213
Cdd:pfam06455 81 ELSNLSNkQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWS 136
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-212 |
4.54e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 101.85 E-value: 4.54e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00108 344 GSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYS 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVII-LPSWMKLLTLMVTLVGgwlSYL 159
Cdd:MTH00108 424 TRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMtMPLYLKLTALAVTILG---FIL 500
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 699976673 160 IMKFDLMENAFKGYK---MKSFIGSMWFMPMISTKWISFMPLKLGLKY-LQLVDLGW 212
Cdd:MTH00108 501 ALELNLLTNNLKFKYpsnTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLaSMLLDLIW 557
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-160 |
8.45e-24 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 98.30 E-value: 8.45e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILES-LSMGVVNKFIYLIFFIATGLTMMY 79
Cdd:COG1009 345 GSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLGAFLTAFY 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 80 TFRLtgYLMGF--KYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWL---------IFPSPLVIILPSWMKLLTLM 148
Cdd:COG1009 424 SFRL--FFLVFfgKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLL 501
|
170
....*....|..
gi 699976673 149 VTLVGGWLSYLI 160
Cdd:COG1009 502 LSLLGIALGYLL 513
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-212 |
8.25e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 89.89 E-value: 8.25e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00137 349 GSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYS 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLTGY-LMGFKySFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPL-VIILPSWMKLLTLMVTLVGgwlsy 158
Cdd:MTH00137 429 LRVVFFvSMGHP-RFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTpVMTMPPLLKLAALIVTILG----- 502
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 699976673 159 LIMKFDLMENAFKGYKMKS------FIGSMWFMPMISTKWISFMPLKLGLKYL-QLVDLGW 212
Cdd:MTH00137 503 LLIALELASLTNKQFKPTPtlpphhFSNMLGFFPAIIHRLTPKLNLTLGQTIAtQMVDQTW 563
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-159 |
4.94e-20 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 87.52 E-value: 4.94e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILES-LSMGVVNKFIYLIffIATGLTMMY 79
Cdd:PRK06590 351 GSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAaFANGHINLFVAGL--VGAFLTAFY 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 80 TFRLtgYLMGF-----KYSFNSlsslHDSNSSMVVGIILLLVVAVVGG-----CSLSWLIFPSPLVII-----LPSWMKL 144
Cdd:PRK06590 429 SFRL--IFLVFhgkekEKIHHP----HESPAVMTLPLIVLAVLSVFAGalivpPFLGVLPLTTELAHGeaehhLPVWVAL 502
|
170
....*....|....*...
gi 699976673 145 LTLMVTLVG---GWLSYL 159
Cdd:PRK06590 503 LPLVVALAGialAWLLYL 520
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-160 |
5.06e-16 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 75.81 E-value: 5.06e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00210 345 GSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYS 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLT--GYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSY 158
Cdd:MTH00210 425 IRLIylTFITNTNSKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAF 504
|
..
gi 699976673 159 LI 160
Cdd:MTH00210 505 VI 506
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-160 |
6.46e-16 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 75.50 E-value: 6.46e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00020 344 GSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYS 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 81 FRLT--GYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLI--FPSPLVIILPSWMKLLTLMVTLVGGWL 156
Cdd:MTH00020 424 IRLIylTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGL 503
|
....
gi 699976673 157 SYLI 160
Cdd:MTH00020 504 VIIL 507
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-94 |
3.04e-10 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 58.88 E-value: 3.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDT--------QDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGvvNKFIYLIFFIA 72
Cdd:PRK07376 361 GSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLT 438
|
90 100
....*....|....*....|..
gi 699976673 73 TGLTMMYTFRLtgYLMGFKYSF 94
Cdd:PRK07376 439 AGMTAFYMFRM--YFLTFEGEF 458
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
10-134 |
6.96e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 55.05 E-value: 6.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 10 TQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLM- 88
Cdd:PRK12650 353 TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVFTFAYSARLVl 432
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 699976673 89 -GFKYSFNSLSSLHDSNSSmvvgiiLLLVVAVVGGCSLSWLIFPSPL 134
Cdd:PRK12650 433 gAFVDGPRDMSHVKEAPVS------LWLPAALPGALSLPLGLVPGLL 473
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-54 |
7.18e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 54.96 E-value: 7.18e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 699976673 1 GSIIHSVK-DTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILE 54
Cdd:MTH00032 360 GSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-56 |
2.43e-07 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 50.00 E-value: 2.43e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESL 56
Cdd:pfam00361 220 GSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-95 |
8.25e-07 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 48.73 E-value: 8.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSV--------KDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILeslsmgvVNKFIY-----L 67
Cdd:CHL00025 361 GSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL-------NDSWLYspifaI 433
|
90 100
....*....|....*....|....*...
gi 699976673 68 IFFIATGLTMMYTFRLtgYLMGFKYSFN 95
Cdd:CHL00025 434 IAWSTAGLTAFYMFRI--YLLTFEGHLR 459
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-121 |
1.37e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 48.04 E-value: 1.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLsMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:PRK12667 368 GVFIHAAG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNAL-LESGFYLPALVLLIASAISLVGY 445
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 699976673 81 FRLTgYLMGFKYSFNSLSSLHDSNSSMVVgIILLLVVAVVG 121
Cdd:PRK12667 446 FRAW-YSLFFGKPKSGEEVEHKESPSMSV-VILVLALAVLI 484
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-83 |
1.86e-05 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 44.75 E-value: 1.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLsMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:COG0651 345 GAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYF 422
|
...
gi 699976673 81 FRL 83
Cdd:COG0651 423 VRI 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
3-83 |
2.22e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 44.75 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 3 IIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMG--------VVNKFIYLIFFIATG 74
Cdd:PRK12646 362 IIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfslISMIIIVFIGVIASI 441
|
....*....
gi 699976673 75 LTMMYTFRL 83
Cdd:PRK12646 442 FTFTYALYM 450
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-122 |
2.41e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.43 E-value: 2.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 10 TQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILE-SLSMGVVNKFIYLIFFIATG-----LTMMYTFRL 83
Cdd:PRK12649 363 TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYEtSVEMGALIGGPFTIIIPAVAvlggvFTFAYSIKL 442
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 699976673 84 T-GYLMGFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGG 122
Cdd:PRK12649 443 IdGIFLGERTHDHLPHHIHEAPYVMLIPAAFLAGLVILFG 482
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
10-135 |
3.51e-05 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 43.92 E-value: 3.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 10 TQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILeslsMGVVNKFIYLIFFIATG--LTMMYTFRLTGYL 87
Cdd:COG1008 356 TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL----LGAFQVNPWLAILAALGliLTAAYLLWMYQRV 431
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 699976673 88 MgFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGcslswlIFPSPLV 135
Cdd:COG1008 432 F-FGPLKEELAELPDLNPRELAVLAPLAALILLLG------LYPQPLL 472
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-84 |
1.90e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 41.71 E-value: 1.90e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 699976673 10 TQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDL----ILESLSMGVVNKFIYLIFFIATGLTMMYTFRLT 84
Cdd:PRK12648 352 TRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFI 430
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
1-162 |
3.73e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 40.65 E-value: 3.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKdTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILE-SLSMGVVnkFIYLIFFIATGLTMMY 79
Cdd:PRK12668 313 GAVLYRTG-TEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISaAGEDHYV--WVWLLLLLASAGTFLH 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 80 TFRLTGYLMGFkySFNSLSSLHDSNSSMVVGIILLLVVAVVGGcslswlIFPSPLVIILP--------SWMKLLTLMVTL 151
Cdd:PRK12668 390 FGIKLPYFAFF--GGDSGLRVKDAPRNMLVAMGIAAFLCIAIG------VYPQALYALLPypvdyepyTASHVLEQLQLL 461
|
170
....*....|.
gi 699976673 152 VGGWLSYLIMK 162
Cdd:PRK12668 462 LFTALAFVLLR 472
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-154 |
4.44e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 40.67 E-value: 4.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLS-MGVVNKFIYLIFFIATGLTMMY 79
Cdd:PRK12647 332 GIIDHET-GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLeAPLWSLILTVAAVLGNALMVAV 410
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 699976673 80 TFrltgyLMGFKYSFNSLSSL----HDSNSSMVVGIILLLVVAVVGGcslswlIFPSplviILPSWMklLTLMVTLVGG 154
Cdd:PRK12647 411 AF-----LVGIKPFLGKLVETpkhpHEAPVLMWLGPAVLAVLGLLFG------LFPF----FFHAAL--LSPAASAVLG 472
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
35-160 |
4.53e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 40.63 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 35 LSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLMGFKySFNSLSSLHDSNSSMVVGIILL 114
Cdd:MTH00063 324 LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVK-SSLSSGVRFLFFNSGLMVFLWL 402
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 699976673 115 LVVavvggcslSWLIFPSPLVIILPSWMKLLTLMVTLVGGWLSYLI 160
Cdd:MTH00063 403 FIN--------YYVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLF 440
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
10-84 |
5.98e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 40.37 E-value: 5.98e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 699976673 10 TQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESL-SMGVVnkFIYLIFFIATGLTMMYTFRLT 84
Cdd:PRK08668 353 TTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALiSKGMP--ITAFMAFFGSIGSFLYVFRPL 426
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-99 |
8.55e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 39.52 E-value: 8.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMGVVNKFIYLIFFIATGLTMMYT 80
Cdd:MTH00095 297 GYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYS 376
|
90 100
....*....|....*....|
gi 699976673 81 FRL-TGYLMGFKYSFNSLSS 99
Cdd:MTH00095 377 YRLwKSFFLSFSKVVNVYSS 396
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-82 |
2.48e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 38.37 E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESL----SMGVVNKFIYLIFFIATGLT 76
Cdd:PRK12644 340 GIIDHST-GTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILT 418
|
....*.
gi 699976673 77 MMYTFR 82
Cdd:PRK12644 419 VAYSLR 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-129 |
3.33e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 37.77 E-value: 3.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 1 GSIIHSVkDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLSMgvVNKFIYLIFFIATGLTMMYT 80
Cdd:PRK08376 372 GAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASF 448
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 699976673 81 FRLTgYLMGFKYSFNSLSSLHDSNSSMVVGIIlLLVVAVVGGCSLSWLI 129
Cdd:PRK08376 449 VKVF-HTAFFGPPSEKVMNVKEPPKPMLVPML-ILAIAIIGMGLFPWQI 495
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-135 |
7.68e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 36.78 E-value: 7.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 10 TQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESlSMGVVNKFIYLIFFIATGLTMMYTFRLTGYLmg 89
Cdd:PRK08375 352 TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVG-AVEAGQWLVLAVLLASSLLALLYFLRIWYRA-- 428
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 699976673 90 fkysFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLV 135
Cdd:PRK08375 429 ----FFGPPPPGSEAPKQEAPLGMLAPSLALALLSLLLGIYAGPLL 470
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-137 |
8.92e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 36.72 E-value: 8.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976673 4 IHSVKDTQDIRFLGSMVQGMPFTCVAMNVANLSLCGVPFLSGFYSKDLILESLS---MGVVNKFIYLIFFIATGLTMMYT 80
Cdd:PRK06589 355 IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASeqnQPWLSIIVMLVVIASSILSALYL 434
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 699976673 81 FRLTGYLmgFKYSFNSLSSLHDSNSSMVVGIILLLVVAVVGGCSLSWLIFPSPLVII 137
Cdd:PRK06589 435 LKILSSI--YKPSLSENSFITKSLPYLMQISVITCCCALTLFYFIQILIREFLAYIT 489
|
|
|