|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
7.10e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 251.60 E-value: 7.10e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00165 313 GSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYS 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPTPEMICLPMIMKTLALSVSIIGGWMGYEL 160
Cdd:MTH00165 393 FRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYEL 472
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 699976715 161 SKFSLAYRLQSLNFYLLVSFMGSMWFMPFISTYGVNKVPMLMGDKVFKVFDQG 213
Cdd:MTH00165 473 SLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQG 525
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
4.56e-44 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 154.42 E-value: 4.56e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00209 309 GNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYS 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPTPEMICLPMIMKTLALSVSIIGGWMGYEL 160
Cdd:MTH00209 389 MRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMV 468
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 699976715 161 SKfslaYRLQSLNFYLLVSFMGSMWFMPFISTYGVNKVPMLMGDKVFKVFDQG 213
Cdd:MTH00209 469 LK----KNFFLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQG 517
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
7.79e-44 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 154.15 E-value: 7.79e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00207 313 GSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYS 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPTPEMICLPMIMKTLALSVSIIGGWMGYEL 160
Cdd:MTH00207 393 TRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLF 472
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 699976715 161 SKFSLAYRLQSLNFYLLVSFMGSMWFMPFISTYGVNKVPMLMGDKVFKVFDQG 213
Cdd:MTH00207 473 TTPNITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQG 525
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
6.37e-43 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 151.53 E-value: 6.37e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00151 310 GSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYS 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPTPEMICLPMIMKTLALSVSIIGGWMGYel 160
Cdd:MTH00151 390 ARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSF-- 467
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 699976715 161 skFSLAYRLQSLNFYLLVSFMGSMWFMPFISTYGVNKVPMLMGDKVFKVFDQG 213
Cdd:MTH00151 468 --GFWDSGFSSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMG 518
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
79-213 |
1.41e-38 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 131.13 E-value: 1.41e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 79 YSLRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPTPEMICLPMIMKTLALSVSIIGGWMGY 158
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 699976715 159 ELSKFSLAYRLQSLNFYlLVSFMGSMWFMPFISTYGVNKVPMLMGDKVFKVFDQG 213
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFN-LHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQG 134
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-162 |
2.81e-33 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 125.28 E-value: 2.81e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00004 343 GSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYS 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPT-PEMICLPMIMKTLALSVSIIGGWMGYE 159
Cdd:MTH00004 423 LRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALE 502
|
...
gi 699976715 160 LSK 162
Cdd:MTH00004 503 LSN 505
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
6.41e-33 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 124.29 E-value: 6.41e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00211 338 GSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYS 417
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPT-PEMICLPMIMKTLALSVSIIGGWMGYE 159
Cdd:MTH00211 418 FRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLE 497
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 699976715 160 LSKFslayrLQSLNFYLLVSFMGSMWFMPFISTYGVNKVPMLMGDKV-FKVFDQG 213
Cdd:MTH00211 498 LVNL-----THKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLsTHLMDLG 547
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-191 |
1.34e-31 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 120.85 E-value: 1.34e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00208 370 GSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYS 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPTPeMICLPMIMKTLALSVSIIGGWMGYEL 160
Cdd:MTH00208 450 FRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSF 528
|
170 180 190
....*....|....*....|....*....|.
gi 699976715 161 SKFSLAYRLQSLNFyllvSFMGSMWFMPFIS 191
Cdd:MTH00208 529 LLSLSSNPINSNFF----SFLSNQWFFVNIS 555
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-164 |
2.33e-29 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 114.23 E-value: 2.33e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00066 341 GSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYS 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPTPEMI-CLPMIMKTLALSVSIIGGWMGYE 159
Cdd:MTH00066 421 FRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALD 500
|
....*
gi 699976715 160 LSKFS 164
Cdd:MTH00066 501 LAKIT 505
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-161 |
2.05e-27 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 108.79 E-value: 2.05e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00108 344 GSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYS 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPT--PEMIcLPMIMKTLALSVSIIGGWMGY 158
Cdd:MTH00108 424 TRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTtiPQMT-MPLYLKLTALAVTILGFILAL 502
|
...
gi 699976715 159 ELS 161
Cdd:MTH00108 503 ELN 505
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-161 |
1.24e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 97.98 E-value: 1.24e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00137 349 GSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYS 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYY-SM-TSEFNcsSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFP--TPEMiCLPMIMKTLALSVSIIGGWM 156
Cdd:MTH00137 429 LRVVFFvSMgHPRFN--PLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPlkTPVM-TMPPLLKLAALIVTILGLLI 505
|
....*
gi 699976715 157 GYELS 161
Cdd:MTH00137 506 ALELA 510
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-153 |
3.73e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 96.58 E-value: 3.73e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:TIGR01974 347 GSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYS 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSM-------LSWVLFPTPEMIC----LPMIMKTLALSV 149
Cdd:TIGR01974 427 FRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFivplfefLKGVLPTSAEPALehhhVPALEIWSPTAV 506
|
....
gi 699976715 150 SIIG 153
Cdd:TIGR01974 507 AILG 510
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-158 |
3.46e-22 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 93.68 E-value: 3.46e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMkNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILE-VVALSSLNMVSFFLYFFSTGLTVCY 79
Cdd:COG1009 345 GSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFY 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 80 SLRLAYYSMTSEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVL---------FPTPEMICLPMIMKTLALSVS 150
Cdd:COG1009 424 SFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLegllapaavLGGELHLAHGLLLNALPLLLS 503
|
....*...
gi 699976715 151 IIGGWMGY 158
Cdd:COG1009 504 LLGIALGY 511
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-158 |
4.70e-22 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 93.30 E-value: 4.70e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEvVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:PRK06590 351 GSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYS 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCSSLHPlNDEGWVMLRGMLTLMVMAVLGG-----SMLSWVLFPT-----PEMICLPMIMKTLALSVS 150
Cdd:PRK06590 430 FRLIFLVFHGKEKEKIHHP-HESPAVMTLPLIVLAVLSVFAGalivpPFLGVLPLTTelahgEAEHHLPVWVALLPLVVA 508
|
....*...
gi 699976715 151 IIGGWMGY 158
Cdd:PRK06590 509 LAGIALAW 516
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-213 |
2.47e-18 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 82.43 E-value: 2.47e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00020 344 GSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYS 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCS--SLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFP----TPEMIclPMIMKTLALSVSIIGG 154
Cdd:MTH00020 424 IRLIYLTFLSNTNLKkaVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSfqitLPPIV--PLSIKLLPVFLSLGGI 501
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 699976715 155 WMGYELSKFSLAYRLQSLNFYLLVS--FMGSMWFMPFISTYGVNKVPMLMGDKV-FKVFDQG 213
Cdd:MTH00020 502 GLVIILYFYSSKTFRVPFSFIGRNSytFLGSAWQFNYILNYFLIKKIWKGGHLIsYRTIDKG 563
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
1.03e-14 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 71.96 E-value: 1.03e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00210 345 GSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYS 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 LRLAYYSMTSEFNCS--SLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVLFPTPEMICLPMIMKTLALSVSIIGGWMGY 158
Cdd:MTH00210 425 IRLIYLTFITNTNSKkeVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAF 504
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 699976715 159 ELSKFSLAYRLQS------LNFYLLVSFMGSMWFMPFISTYGVNKVPMLMGDKV-FKVFDQG 213
Cdd:MTH00210 505 VIYNSMVFLIKISrrgvsiRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHLItYRIIDRG 566
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-91 |
5.94e-14 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 70.05 E-value: 5.94e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKN--------SQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSslNMVSFFLYFFS 72
Cdd:PRK07376 361 GSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLT 438
|
90
....*....|....*....
gi 699976715 73 TGLTVCYSLRLayYSMTSE 91
Cdd:PRK07376 439 AGMTAFYMFRM--YFLTFE 455
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-72 |
1.31e-10 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 59.25 E-value: 1.31e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFS 72
Cdd:pfam00361 220 GSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-91 |
5.12e-09 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 55.28 E-value: 5.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNM--------KNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVsfFLYFFS 72
Cdd:CHL00025 361 GSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFA--IIAWST 438
|
90
....*....|....*....
gi 699976715 73 TGLTVCYSLRLayYSMTSE 91
Cdd:CHL00025 439 AGLTAFYMFRI--YLLTFE 455
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-55 |
1.54e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 53.81 E-value: 1.54e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 699976715 1 GAIIHNMK-NSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEV 55
Cdd:MTH00032 360 GSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-83 |
4.14e-07 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 49.38 E-value: 4.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHnMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEvVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:COG0651 345 GAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYF 422
|
...
gi 699976715 81 LRL 83
Cdd:COG0651 423 VRI 425
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-129 |
9.31e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 48.34 E-value: 9.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 10 SQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILeVVALSSLNMVSFFLYFFSTGLTVCYSLRLAYYSMT 89
Cdd:PRK08375 352 TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFF 430
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 699976715 90 SEFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVL 129
Cdd:PRK08375 431 GPPPPGSEAPKQEAPLGMLAPSLALALLSLLLGIYAGPLL 470
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-133 |
2.06e-06 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 47.38 E-value: 2.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKnSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILevVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:COG1008 348 GVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNPWLAILAALGLILTAAYL 424
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 699976715 81 LRLAYYSMTSEFNcSSLHPLNDEGWVMLRGMLTLMVMAVLGGsmlswvLFPTP 133
Cdd:COG1008 425 LWMYQRVFFGPLK-EELAELPDLNPRELAVLAPLAALILLLG------LYPQP 470
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
1-122 |
1.79e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 44.89 E-value: 1.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHnMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:PRK12668 313 GAVLY-RTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFG 391
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 699976715 81 LRLAYYSMtseFNCSSLHPLNDEGWVMLRGMLTLMVMAVLGG 122
Cdd:PRK12668 392 IKLPYFAF---FGGDSGLRVKDAPRNMLVAMGIAAFLCIAIG 430
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-157 |
3.19e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 44.13 E-value: 3.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNmKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLyfFSTGLTVcys 80
Cdd:PRK07390 354 GSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLL--LVNALTA--- 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 81 lrlayYSMTSEFNCSSL---HPLN----DEGWVMLRGMLTLMVMAVLGGSML-SWVLFPTPEMICLPMiMKTLALSvSII 152
Cdd:PRK07390 428 -----FNLTRVFRLVFLgkpQQKTrrspEVLWPMALPMVILAGFTLHLPLLLqQWGLLPSWEALNLWA-APLLVAS-GLL 500
|
....*
gi 699976715 153 GGWMG 157
Cdd:PRK07390 501 GVLLG 505
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-92 |
1.42e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 41.83 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYS 80
Cdd:MTH00095 297 GYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYS 376
|
90
....*....|..
gi 699976715 81 LRLAYYSMTSEF 92
Cdd:MTH00095 377 YRLWKSFFLSFS 388
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-58 |
3.36e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 40.85 E-value: 3.36e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 699976715 1 GAIIHNMkNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVAL 58
Cdd:PRK08376 372 GAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-129 |
6.26e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 39.98 E-value: 6.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKNSQdIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVcYS 80
Cdd:PRK08668 345 AAVIYRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFL-YV 422
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 699976715 81 LRLAYYSMTSEFNcSSLHPLNDEGWVMLRGMLTLMVMAVLGGSMLSWVL 129
Cdd:PRK08668 423 FRPLAGVFLGQLP-SDHKDVKEAPLPMLIPMAILVLLNVVFGVAPGLVL 470
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-85 |
1.00e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 39.57 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMKnSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTgLTVCYS 80
Cdd:PRK12667 368 GVFIHAAG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGY 445
|
....*
gi 699976715 81 LRLAY 85
Cdd:PRK12667 446 FRAWY 450
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-83 |
1.23e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.03 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 4 IHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSSLNMVSFFLYFFSTGLTVCYSLRL 83
Cdd:PRK06589 355 IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSALYL 434
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
12-85 |
2.68e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 38.25 E-value: 2.68e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 699976715 12 DIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLIL-EVVALSSLNMVSFFLYFFST---GLTVCYSLRLAY 85
Cdd:PRK12648 354 DMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIH 431
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
1-60 |
2.90e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 37.95 E-value: 2.90e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976715 1 GAIIHNMkNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILEVVALSS 60
Cdd:PRK06521 360 GAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSP 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
3-54 |
7.22e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 37.12 E-value: 7.22e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 699976715 3 IIHNMKNSQDIRFMGGLSSQMPLTSVCFNVSNFALCGMPFLAGFYSKDLILE 54
Cdd:PRK12649 356 IVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
|