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Conserved domains on  [gi|712045064|gb|AIW64773|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Pielomastax soochowensis]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-91 5.71e-15

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 63.63  E-value: 5.71e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045064  4 LSFLVSSVMYMCGVYVYSSSRKHLLMVLLGLEYMVLSIYTLIVLYLMLYMKSLFFLVLFLVFSVCEGALGLSILVSMIRS 83
Cdd:MTH00162  2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                ....*...
gi 712045064 84 HGSDFFNS 91
Cdd:MTH00162 82 HGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-91 5.71e-15

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 63.63  E-value: 5.71e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045064  4 LSFLVSSVMYMCGVYVYSSSRKHLLMVLLGLEYMVLSIYTLIVLYLMLYMKSLFFLVLFLVFSVCEGALGLSILVSMIRS 83
Cdd:MTH00162  2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                ....*...
gi 712045064 84 HGSDFFNS 91
Cdd:MTH00162 82 HGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
6-95 4.51e-05

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 38.70  E-value: 4.51e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045064   6 FLVSSVMYMCGVYVYSSsRKHLLMVLLGLEYMVLSIYTLIVLYLML--YMKSLFFLVLFLVFSVCEGALGLSILVSMIRS 83
Cdd:pfam00420  3 LLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLtaDPLPQALILTAIVIAAAEAAVGLALLVRIYRT 81

                         90
                 ....*....|..
gi 712045064  84 HGSDFFNSFSLL 95
Cdd:pfam00420 82 HGTDDVDSLNLL 93
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-91 5.71e-15

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 63.63  E-value: 5.71e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045064  4 LSFLVSSVMYMCGVYVYSSSRKHLLMVLLGLEYMVLSIYTLIVLYLMLYMKSLFFLVLFLVFSVCEGALGLSILVSMIRS 83
Cdd:MTH00162  2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                ....*...
gi 712045064 84 HGSDFFNS 91
Cdd:MTH00162 82 HGNDYFSS 89
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-95 1.10e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 47.92  E-value: 1.10e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045064  1 MVSLSFLVSSVMYMCGVYVYSSSRKHLLMVLLGLEYMVLSIYTLIVLYLMLYMKSLFFLVLFLVFSVCEGALGLSILVSM 80
Cdd:MTH00149  1 SMFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSL 80

                        90
                ....*....|....*
gi 712045064 81 IRSHGSDFFNSFSLL 95
Cdd:MTH00149 81 IRLHGNDYVSSLSSL 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-94 6.45e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 43.42  E-value: 6.45e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045064  6 FLVSSVMYMCGVYVYSSSRKHLLMVLLGLEYMVLSIYTLIVLYLMLYMKSLFFLVLFLVFSVCEGALGLSILVSMIRSHG 85
Cdd:MTH00188  6 ILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHG 85


                ....*....
gi 712045064 86 SDFFNSFSL 94
Cdd:MTH00188 86 SDYVSSLNL 94
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 24-95 5.59e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 40.98  E-value: 5.59e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 712045064 24 RKHLLMVLLGLEYMVLSIYTLIVLYLM--LYMKSLFFLVLFLVFSVCEGALGLSILVSMIRSHGSDFFNSFSLL 95
Cdd:MTH00125 23 RTHLMSALLCLESMMLSLFIMLSLWPIttQTPSFTPMPIILLTFSACEAGTGLALLVATTRTHGSDHLKNLNLL 96
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
6-95 4.51e-05

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 38.70  E-value: 4.51e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045064   6 FLVSSVMYMCGVYVYSSsRKHLLMVLLGLEYMVLSIYTLIVLYLML--YMKSLFFLVLFLVFSVCEGALGLSILVSMIRS 83
Cdd:pfam00420  3 LLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLtaDPLPQALILTAIVIAAAEAAVGLALLVRIYRT 81

                         90
                 ....*....|..
gi 712045064  84 HGSDFFNSFSLL 95
Cdd:pfam00420 82 HGTDDVDSLNLL 93
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 24-95 1.06e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 37.64  E-value: 1.06e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 712045064 24 RKHLLMVLLGLEYMVLSIYTLIVLYLMLY--MKSLFFLVLFLVFSVCEGALGLSILVSMIRSHGSDFFNSFSLL 95
Cdd:MTH00126 23 RTHLLSALLCLEGMMLSLFIALSLWALQLesTSFSAAPMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLL 96
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-93 3.80e-04

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 36.27  E-value: 3.80e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045064  1 MVSLSFLVSSVMYMCgVYVYSSSRKHLLMVLLGLEYMVLSIYTLIVLYLMLYMKSLFFLVLFLVFS-VCEGALGLSILVS 79
Cdd:MTH00013  1 MMSPLFILSISPFIS-MFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANQVNGMLAIVLLTFgACEASLGLSLLVL 79

                        90
                ....*....|....
gi 712045064 80 MIRSHGSDFFNSFS 93
Cdd:MTH00013 80 MTRSYGNDMLKSLT 93
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 24-95 1.53e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 34.58  E-value: 1.53e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 712045064 24 RKHLLMVLLGLEYMVLSIYTLIVLYLMLYMKSLFFLVLFLVFSV--CEGALGLSILVSMIRSHGSDFFNSFSLL 95
Cdd:MTH00067 23 RTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFsaCEASTGLALMVATTRTHGTDHLKNLNLL 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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