|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.51e-68 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 200.94 E-value: 1.51e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 1 MNLPLTLLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 717491361 81 SNNLKLTTTVALTLITILALSLAYEWLQKGLEWEE 115
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
8.63e-47 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 146.22 E-value: 8.63e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 1 MNLPLTLLT-DILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136 1 MNLITTILTiTIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 717491361 80 QSNNLKLTTTVALTLITILALSLAYEWLQKGLEWEE 115
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
3.40e-44 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 139.36 E-value: 3.40e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 3 LPLTLLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSN 82
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 717491361 83 NLKLTTTVALTLITILALSLAYEWLQKGLEWEE 115
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
4.09e-42 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 134.24 E-value: 4.09e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 1 MNLPLTLLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|...
gi 717491361 81 SNNLKLTTTVALTLITILALSLAYEWLQKGLEW 113
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
1.08e-35 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 118.16 E-value: 1.08e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 1 MNLPLTLLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 717491361 81 SNNLKLTTTVALTLITILALSLAYEWLQKGLEWEE 115
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
11-113 |
8.37e-33 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 110.76 E-value: 8.37e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 11 ILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNlkLTTTV 90
Cdd:MTH00203 12 LLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS--LSLLL 89
|
90 100
....*....|....*....|...
gi 717491361 91 ALTLITILALSLAYEWLQKGLEW 113
Cdd:MTH00203 90 AFLFLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
18-112 |
7.28e-30 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 102.50 E-value: 7.28e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 18 VFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKLTTTV-ALTLIT 96
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVeMLIFIA 78
|
90
....*....|....*.
gi 717491361 97 ILALSLAYEWLQKGLE 112
Cdd:pfam00507 79 ILLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
5-115 |
7.43e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 93.00 E-value: 7.43e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 5 LTLLTDILLVLVLVFIAFWLPQLNIY-TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNN 83
Cdd:MTH00148 6 LSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSF 85
|
90 100 110
....*....|....*....|....*....|..
gi 717491361 84 LKLTTTVALTLITILALSLAYEWLQKGLEWEE 115
Cdd:MTH00148 86 SVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
1.74e-25 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 92.15 E-value: 1.74e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 5 LTLLTDILLVLVLVFIAFWLPQLNIY-TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNN 83
Cdd:MTH00161 4 IILLIILLISIILMILASLLSKKSIMdREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSN 83
|
90 100 110
....*....|....*....|....*....|
gi 717491361 84 LKLTTTVALTLITILALSLAYEWLQKGLEW 113
Cdd:MTH00161 84 MMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
11-113 |
1.47e-23 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 87.10 E-value: 1.47e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 11 ILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKLTTTV 90
Cdd:COG0838 16 LGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFGLI 93
|
90 100
....*....|....*....|....
gi 717491361 91 ALTL-ITILALSLAYEWLQKGLEW 113
Cdd:COG0838 94 EMLVfIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
4.47e-22 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 83.50 E-value: 4.47e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 1 MNLPLTLLTDILLVLVLVFIAFWL--PQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMlsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*
gi 717491361 79 SQSNNLKLTTTVALTLITILALSLAYEWLQKGLEW 113
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
31-114 |
3.16e-21 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 81.29 E-value: 3.16e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 31 TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLKLTTTVALTLItILALSLAYEWLQKG 110
Cdd:MTH00055 36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKGG 114
|
....
gi 717491361 111 LEWE 114
Cdd:MTH00055 115 LEWE 118
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-113 |
3.57e-20 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 78.75 E-value: 3.57e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 1 MNLPLTLLTDILLVLVLVFIAFWL--PQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVlaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*
gi 717491361 79 SQSNNLKLTTTVALTLITILALSLAYEWLQKGLEW 113
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
7-114 |
1.79e-19 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 76.83 E-value: 1.79e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 7 LLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKL 86
Cdd:PRK06602 15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92
|
90 100
....*....|....*....|....*....
gi 717491361 87 TTTV-ALTLITILALSLAYEWLQKGLEWE 114
Cdd:PRK06602 93 LGFVeAMIFILVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
1-114 |
6.07e-19 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 75.48 E-value: 6.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 1 MNLPLTLLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:MTH00018 1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78
|
90 100 110
....*....|....*....|....*....|....*
gi 717491361 81 SNNLKL-TTTVALTLITILALSLAYEWLQKGLEWE 114
Cdd:MTH00018 79 YNQIAPfGFWTMVGFLFILTLGLIYEWIKGGLEWE 113
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
8-114 |
1.06e-18 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 74.97 E-value: 1.06e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 8 LTDILLVLVLVFIAFWLPQLNIY-----TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSN 82
Cdd:MTH00030 13 LLGVGIILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFN 90
|
90 100 110
....*....|....*....|....*....|...
gi 717491361 83 NLKLTTT-VALTLITILALSLAYEWLQKGLEWE 114
Cdd:MTH00030 91 QLNLFSFwIVYTFLIVLAIGLAYEWIKGGLEWD 123
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
7-113 |
7.87e-12 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 57.30 E-value: 7.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 7 LLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKL 86
Cdd:CHL00022 14 LIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91
|
90 100
....*....|....*....|....*...
gi 717491361 87 TTTV-ALTLITILALSLAYEWLQKGLEW 113
Cdd:CHL00022 92 SAFIeALIFVLILIVGLVYAWRKGALEW 119
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
33-114 |
4.25e-11 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 55.45 E-value: 4.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 33 KYNPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQSNNLKLTTTVALTL-ITILALSLAYEWLQK 109
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALfMLTVFVAYAYVWRRG 114
|
....*
gi 717491361 110 GLEWE 114
Cdd:PRK07928 115 GLEWD 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
7-113 |
2.02e-09 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 51.28 E-value: 2.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 7 LLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWASQSNNLKL 86
Cdd:PRK07756 16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGL 93
|
90 100
....*....|....*....|....*...
gi 717491361 87 TTTVA-LTLITILALSLAYEWLQKGLEW 113
Cdd:PRK07756 94 FALIEmLIFVVMLLVGLAYAWKKKVLQW 121
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-73 |
2.71e-07 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 45.27 E-value: 2.71e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 717491361 1 MNLPLTLLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLL 73
Cdd:MTH00092 2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
11-114 |
1.54e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 41.19 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 717491361 11 ILLVLVLVFIAFW------------LPQLNIYTEKYNPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWA 78
Cdd:PRK08489 13 VFVLLVLTFVAFFlttrlarfisrkLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
|
90 100 110
....*....|....*....|....*....|....*..
gi 717491361 79 SQSNNLKLTTTVALTL-ITILALSLAYEWLQKGLEWE 114
Cdd:PRK08489 90 VDFKLLGLFGLIEMLLfIVLLTIGFIYAWKKGALEWQ 126
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
11-76 |
2.52e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 37.57 E-value: 2.52e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 717491361 11 ILLVLVLVFIAFWLPQLNIYT---EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060 12 FLLFLVIYFFHSGLWNNKIYSggfSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|