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Conserved domains on  [gi|766121990|gb|AJR51918|]
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Dal1p [Saccharomyces cerevisiae YJM1460]

Protein Classification

cyclic amidohydrolase( domain architecture ID 10101431)

cyclic hydrolase that catalyzes the hydrolytic cleavage of the ring of either allantoin (5-ureidohydantoin) to form allantoic acid (allantoinase EC 3.5.2.5) or of dihydropyrimidines and hydantoins (L-hydantoinase EC 3.5.2.2)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
L-HYD_ALN cd01315
L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the ...
9-456 0e+00

L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.


:

Pssm-ID: 238640 [Multi-domain]  Cd Length: 447  Bit Score: 683.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   9 DHVIINGANKPAtivYSTESGKILDVLeGSVVMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNEPGRTSWEGFETGT 88
Cdd:cd01315    1 DLVIKNGRVVTP---DGVREADIAVKG-GKIAAIGPDIANTEAEEVIDAGGLVVMPGLIDTHVHINEPGRTEWEGFETGT 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  89 QAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEF 168
Cdd:cd01315   77 KAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWGGLVPGNLDQLRPLDEAGVVGFKCFLCPSGVDEF 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 169 PPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQS--HREYSSFLSSRPDSFEIDAINLILECLRARNgpvPPV 246
Cdd:cd01315  157 PAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAkgKRDYRDYLASRPVFTEVEAIQRILLLAKETG---CRL 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 247 HIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSP 326
Cdd:cd01315  234 HIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSDHSP 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 327 CTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTA 401
Cdd:cd01315  314 CTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVnkrglSLEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPE 393
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 766121990 402 SEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNaNGVSKTPLGQTLL 456
Cdd:cd01315  394 EEFTVDAEDLYYKNKISPYVGRTLKGRVHATILRGTVVYQD-GEVVGEPLGQLLL 447
 
Name Accession Description Interval E-value
L-HYD_ALN cd01315
L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the ...
9-456 0e+00

L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.


Pssm-ID: 238640 [Multi-domain]  Cd Length: 447  Bit Score: 683.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   9 DHVIINGANKPAtivYSTESGKILDVLeGSVVMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNEPGRTSWEGFETGT 88
Cdd:cd01315    1 DLVIKNGRVVTP---DGVREADIAVKG-GKIAAIGPDIANTEAEEVIDAGGLVVMPGLIDTHVHINEPGRTEWEGFETGT 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  89 QAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEF 168
Cdd:cd01315   77 KAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWGGLVPGNLDQLRPLDEAGVVGFKCFLCPSGVDEF 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 169 PPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQS--HREYSSFLSSRPDSFEIDAINLILECLRARNgpvPPV 246
Cdd:cd01315  157 PAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAkgKRDYRDYLASRPVFTEVEAIQRILLLAKETG---CRL 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 247 HIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSP 326
Cdd:cd01315  234 HIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSDHSP 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 327 CTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTA 401
Cdd:cd01315  314 CTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVnkrglSLEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPE 393
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 766121990 402 SEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNaNGVSKTPLGQTLL 456
Cdd:cd01315  394 EEFTVDAEDLYYKNKISPYVGRTLKGRVHATILRGTVVYQD-GEVVGEPLGQLLL 447
allantoinase TIGR03178
allantoinase; This enzyme carries out the first step in the degradation of allantoin, a ...
5-456 1.98e-169

allantoinase; This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.


Pssm-ID: 163175 [Multi-domain]  Cd Length: 443  Bit Score: 483.81  E-value: 1.98e-169
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990    5 AITSDHVIINGANKPATIVysTESGKIldvlegsvvmekTEITKYEIHT---LENVSPCTILPGLVDSHVHLNEPGRTSW 81
Cdd:TIGR03178   3 IIRGGRVILPNGEREADVG--VKGGKI------------AAIGPDILGPaakIIDAGGLVVFPGVVDTHVHINEPGRTEW 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   82 EGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLL 161
Cdd:TIGR03178  69 EGFETGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFWGGLVPYNLDDLRELDEAGVVGFKAFLS 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  162 DSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQ--PEQSHREYSSFLSSRPDSFEIDAINLILECLRAR 239
Cdd:TIGR03178 149 PSGDDEFPHVDDWQLYKGMRELARLGQLLLVHAENPAITSALGEeaPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVT 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  240 NGpvpPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGS 319
Cdd:TIGR03178 229 GC---RVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLIDC 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  320 VVSDHSPCTPELKnlQKGDFFDSWGGIASVGLGLPLMFTQ-----GCSLVDIVTWCCKNTSHQVGLsHQKGTIAPGYDAD 394
Cdd:TIGR03178 306 VVSDHSPCTPDLK--RAGDFFKAWGGIAGLQSTLDVMFDEavqkrGLPLEDIARLMATNPAKRFGL-AQKGRIAPGKDAD 382
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 766121990  395 LVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANgVSKTPLGQTLL 456
Cdd:TIGR03178 383 FVFVDPDESYTLTPDDLYYRHKVSPYVGRTIGGRVRATYLRGQCIYDDEQ-FIGAPKGQLLL 443
PLN02795 PLN02795
allantoinase
6-456 5.86e-153

allantoinase


Pssm-ID: 178392 [Multi-domain]  Cd Length: 505  Bit Score: 444.22  E-value: 5.86e-153
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   6 ITSDHVIINGANKPATIvySTESGKILDVLEGS---VVMEKTEITKYeihtlenvSPCTILPGLVDSHVHLNEPGRTSWE 82
Cdd:PLN02795  48 LYSKRVVTPAGVIPGAV--EVEGGRIVSVTKEEeapKSQKKPHVLDY--------GNAVVMPGLIDVHVHLNEPGRTEWE 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  83 GFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVP---HNLPDLIPLVKAGVRGFKGF 159
Cdd:PLN02795 118 GFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLYVDVGFWGGLVPenaHNASVLEELLDAGALGLKSF 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 160 LLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLR-A 238
Cdd:PLN02795 198 MCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVESDSRLDADPRSYSTYLKSRPPSWEQEAIRQLLEVAKdT 277
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 239 RNGPVPP---VHIVHLASMK-AIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALRE 314
Cdd:PLN02795 278 RPGGVAEgahVHIVHLSDAEsSLELIKEAKAKGDSVTVETCPHYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLD 357
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 315 GVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ----GCSLVDIVTWCCKNTSHQVGLsHQKGTIAPG 390
Cdd:PLN02795 358 GDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTAgrayGLTLEQLARWWSERPAKLAGL-DSKGAIAPG 436
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 766121990 391 YDADLVVFDTASEHKI-SNSSVYFKNK-LTAYNGMTVKGTVLKTILRGQVVYTNANgVSKTPLGQTLL 456
Cdd:PLN02795 437 KDADIVVWDPEAEFVLdESYPIYHKHKsLSPYLGTKLSGKVIATFVRGNLVFLEGK-HAKQACGSPIL 503
AllB COG0044
Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; ...
60-455 9.53e-133

Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; Dihydroorotase or related cyclic amidohydrolase is part of the Pathway/BioSystem: Pyrimidine biosynthesis


Pssm-ID: 439814 [Multi-domain]  Cd Length: 439  Bit Score: 390.22  E-value: 9.53e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVP 139
Cdd:COG0044   46 LLVLPGLIDLHVHLREPGLEHKEDIETGTRAAAAGGVTTVVDMP-NTNPVTDTPEALEFKLARAEEKALVDVGPHGALTK 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 140 ---HNLPDLIPLVKAGVRGFKGFLLDSGVEefPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHeDQQQPEQSHREYSSF 216
Cdd:COG0044  125 glgENLAELGALAEAGAVAFKVFMGSDDGN--PVLDDGLLRRALEYAAEFGALVAVHAEDPDLI-RGGVMNEGKTSPRLG 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 217 LSSRPDSFEIDAINLILECLRARNGPVppvHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCC 296
Cdd:COG0044  202 LKGRPAEAEEEAVARDIALAEETGARL---HIVHVSTAEAVELIREAKARGLPVTAEVCPHHLTLTDEDLERYGTNFKVN 278
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 297 PPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNlqkGDFFDSWGGIASVGLGLPLMFTQG-----CSLVDIVTWCC 371
Cdd:COG0044  279 PPLRTEEDREALWEGLADGTIDVIATDHAPHTLEEKE---LPFAEAPNGIPGLETALPLLLTELvhkgrLSLERLVELLS 355
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 372 KNTSHQVGLsHQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKtPL 451
Cdd:COG0044  356 TNPARIFGL-PRKGRIAVGADADLVLFDPDAEWTVTAEDLHSKSKNTPFEGRELTGRVVATIVRGRVVYEDGEVVGE-PR 433

                 ....
gi 766121990 452 GQTL 455
Cdd:COG0044  434 GRFL 437
Amidohydro_1 pfam01979
Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase ...
61-439 1.27e-46

Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilization as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included.


Pssm-ID: 460401 [Multi-domain]  Cd Length: 334  Bit Score: 164.21  E-value: 1.27e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   61 TILPGLVDSHVHLN--------EPGRTSWEGFETGTQAAISGGVTTVVDMPlnaippTTNVENFRIKLEAAEgQMWCDVG 132
Cdd:pfam01979   1 IVLPGLIDAHVHLEmgllrgipVPPEFAYEALRLGITTMLKSGTTTVLDMG------ATTSTGIEALLEAAE-ELPLGLR 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  133 FWGG-------LVPHNLPDLIPLVKAGVRGFKGFLlDSGV------EEFPPIGKEYIEEALKVLAEEDTMMMFHA-ELPK 198
Cdd:pfam01979  74 FLGPgcsldtdGELEGRKALREKLKAGAEFIKGMA-DGVVfvglapHGAPTFSDDELKAALEEAKKYGLPVAIHAlETKG 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  199 AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILEclrarngpvppvHIVHLASMKAIPLIRKARASGLPvttetcfhy 278
Cdd:pfam01979 153 EVEDAIAAFGGGIEHGTHLEVAESGGLLDIIKLILA------------HGVHLSPTEANLLAEHLKGAGVA--------- 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  279 LCIAAEQIpdgatyfkccppirSESNRQGLWDALREGVIGSVVSDHSPCtpelknlqkGDFFDSWGGIAsVGLGLPLMFT 358
Cdd:pfam01979 212 HCPFSNSK--------------LRSGRIALRKALEDGVKVGLGTDGAGS---------GNSLNMLEELR-LALELQFDPE 267
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  359 QGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTasehkisnssvyfkNKLTAYNGMTVKGTVLKTILRGQV 438
Cdd:pfam01979 268 GGLSPLEALRMATINPAKALGLDDKVGSIEVGKDADLVVVDL--------------DPLAAFFGLKPDGNVKKVIVKGKI 333

                  .
gi 766121990  439 V 439
Cdd:pfam01979 334 V 334
 
Name Accession Description Interval E-value
L-HYD_ALN cd01315
L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the ...
9-456 0e+00

L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.


Pssm-ID: 238640 [Multi-domain]  Cd Length: 447  Bit Score: 683.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   9 DHVIINGANKPAtivYSTESGKILDVLeGSVVMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNEPGRTSWEGFETGT 88
Cdd:cd01315    1 DLVIKNGRVVTP---DGVREADIAVKG-GKIAAIGPDIANTEAEEVIDAGGLVVMPGLIDTHVHINEPGRTEWEGFETGT 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  89 QAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLLDSGVEEF 168
Cdd:cd01315   77 KAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWGGLVPGNLDQLRPLDEAGVVGFKCFLCPSGVDEF 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 169 PPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQS--HREYSSFLSSRPDSFEIDAINLILECLRARNgpvPPV 246
Cdd:cd01315  157 PAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAkgKRDYRDYLASRPVFTEVEAIQRILLLAKETG---CRL 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 247 HIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSP 326
Cdd:cd01315  234 HIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSDHSP 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 327 CTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTA 401
Cdd:cd01315  314 CTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVnkrglSLEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPE 393
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 766121990 402 SEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNaNGVSKTPLGQTLL 456
Cdd:cd01315  394 EEFTVDAEDLYYKNKISPYVGRTLKGRVHATILRGTVVYQD-GEVVGEPLGQLLL 447
allantoinase TIGR03178
allantoinase; This enzyme carries out the first step in the degradation of allantoin, a ...
5-456 1.98e-169

allantoinase; This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.


Pssm-ID: 163175 [Multi-domain]  Cd Length: 443  Bit Score: 483.81  E-value: 1.98e-169
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990    5 AITSDHVIINGANKPATIVysTESGKIldvlegsvvmekTEITKYEIHT---LENVSPCTILPGLVDSHVHLNEPGRTSW 81
Cdd:TIGR03178   3 IIRGGRVILPNGEREADVG--VKGGKI------------AAIGPDILGPaakIIDAGGLVVFPGVVDTHVHINEPGRTEW 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   82 EGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLIPLVKAGVRGFKGFLL 161
Cdd:TIGR03178  69 EGFETGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFWGGLVPYNLDDLRELDEAGVVGFKAFLS 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  162 DSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQ--PEQSHREYSSFLSSRPDSFEIDAINLILECLRAR 239
Cdd:TIGR03178 149 PSGDDEFPHVDDWQLYKGMRELARLGQLLLVHAENPAITSALGEeaPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVT 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  240 NGpvpPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGS 319
Cdd:TIGR03178 229 GC---RVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLIDC 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  320 VVSDHSPCTPELKnlQKGDFFDSWGGIASVGLGLPLMFTQ-----GCSLVDIVTWCCKNTSHQVGLsHQKGTIAPGYDAD 394
Cdd:TIGR03178 306 VVSDHSPCTPDLK--RAGDFFKAWGGIAGLQSTLDVMFDEavqkrGLPLEDIARLMATNPAKRFGL-AQKGRIAPGKDAD 382
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 766121990  395 LVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANgVSKTPLGQTLL 456
Cdd:TIGR03178 383 FVFVDPDESYTLTPDDLYYRHKVSPYVGRTIGGRVRATYLRGQCIYDDEQ-FIGAPKGQLLL 443
PLN02795 PLN02795
allantoinase
6-456 5.86e-153

allantoinase


Pssm-ID: 178392 [Multi-domain]  Cd Length: 505  Bit Score: 444.22  E-value: 5.86e-153
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   6 ITSDHVIINGANKPATIvySTESGKILDVLEGS---VVMEKTEITKYeihtlenvSPCTILPGLVDSHVHLNEPGRTSWE 82
Cdd:PLN02795  48 LYSKRVVTPAGVIPGAV--EVEGGRIVSVTKEEeapKSQKKPHVLDY--------GNAVVMPGLIDVHVHLNEPGRTEWE 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  83 GFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVP---HNLPDLIPLVKAGVRGFKGF 159
Cdd:PLN02795 118 GFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLYVDVGFWGGLVPenaHNASVLEELLDAGALGLKSF 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 160 LLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILECLR-A 238
Cdd:PLN02795 198 MCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVESDSRLDADPRSYSTYLKSRPPSWEQEAIRQLLEVAKdT 277
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 239 RNGPVPP---VHIVHLASMK-AIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALRE 314
Cdd:PLN02795 278 RPGGVAEgahVHIVHLSDAEsSLELIKEAKAKGDSVTVETCPHYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLD 357
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 315 GVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQ----GCSLVDIVTWCCKNTSHQVGLsHQKGTIAPG 390
Cdd:PLN02795 358 GDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTAgrayGLTLEQLARWWSERPAKLAGL-DSKGAIAPG 436
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 766121990 391 YDADLVVFDTASEHKI-SNSSVYFKNK-LTAYNGMTVKGTVLKTILRGQVVYTNANgVSKTPLGQTLL 456
Cdd:PLN02795 437 KDADIVVWDPEAEFVLdESYPIYHKHKsLSPYLGTKLSGKVIATFVRGNLVFLEGK-HAKQACGSPIL 503
AllB COG0044
Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; ...
60-455 9.53e-133

Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; Dihydroorotase or related cyclic amidohydrolase is part of the Pathway/BioSystem: Pyrimidine biosynthesis


Pssm-ID: 439814 [Multi-domain]  Cd Length: 439  Bit Score: 390.22  E-value: 9.53e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVP 139
Cdd:COG0044   46 LLVLPGLIDLHVHLREPGLEHKEDIETGTRAAAAGGVTTVVDMP-NTNPVTDTPEALEFKLARAEEKALVDVGPHGALTK 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 140 ---HNLPDLIPLVKAGVRGFKGFLLDSGVEefPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHeDQQQPEQSHREYSSF 216
Cdd:COG0044  125 glgENLAELGALAEAGAVAFKVFMGSDDGN--PVLDDGLLRRALEYAAEFGALVAVHAEDPDLI-RGGVMNEGKTSPRLG 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 217 LSSRPDSFEIDAINLILECLRARNGPVppvHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCC 296
Cdd:COG0044  202 LKGRPAEAEEEAVARDIALAEETGARL---HIVHVSTAEAVELIREAKARGLPVTAEVCPHHLTLTDEDLERYGTNFKVN 278
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 297 PPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNlqkGDFFDSWGGIASVGLGLPLMFTQG-----CSLVDIVTWCC 371
Cdd:COG0044  279 PPLRTEEDREALWEGLADGTIDVIATDHAPHTLEEKE---LPFAEAPNGIPGLETALPLLLTELvhkgrLSLERLVELLS 355
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 372 KNTSHQVGLsHQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKtPL 451
Cdd:COG0044  356 TNPARIFGL-PRKGRIAVGADADLVLFDPDAEWTVTAEDLHSKSKNTPFEGRELTGRVVATIVRGRVVYEDGEVVGE-PR 433

                 ....
gi 766121990 452 GQTL 455
Cdd:COG0044  434 GRFL 437
PRK06189 PRK06189
allantoinase; Provisional
62-458 2.97e-121

allantoinase; Provisional


Pssm-ID: 235732 [Multi-domain]  Cd Length: 451  Bit Score: 361.33  E-value: 2.97e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHN 141
Cdd:PRK06189  52 VFPGMIDVHVHFNEPGRTHWEGFATGSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALWGGLVPGN 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 142 LPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPK--AHEDQQQPEQSHREYSSFLSS 219
Cdd:PRK06189 132 LEHLRELAEAGVIGFKAFMSNSGTDEFRSSDDLTLYEGMKEIAALGKILALHAESDAltRHLTTQARQQGKTDVRDYLES 211
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 220 RPDSFEIDAINLILECLRARNGpvpPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPI 299
Cdd:PRK06189 212 RPVVAELEAVQRALLYAQETGC---PLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFERIGAVAKCAPPL 288
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 300 RSESNRQGLWDALREGVIGSVVSDHSPCTPELKnlQKGDFFDSWGGIASVGLGLPLMFTQGC-----SLVDIVTWCCKNT 374
Cdd:PRK06189 289 RSRSQKEELWRGLLAGEIDMISSDHSPCPPELK--EGDDFFLVWGGISGGQSTLLVMLTEGYiergiPLETIARLLATNP 366
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 375 SHQVGLShQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNaNGVSKTPLGQT 454
Cdd:PRK06189 367 AKRFGLP-QKGRLEVGADADFVLVDLDETYTLTKEDLFYRHKQSPYEGRTFPGRVVATYLRGQCVYQD-GEVFPPPRGQL 444

                 ....
gi 766121990 455 LLDS 458
Cdd:PRK06189 445 LRPS 448
PRK08044 PRK08044
allantoinase AllB;
64-456 1.52e-92

allantoinase AllB;


Pssm-ID: 169193 [Multi-domain]  Cd Length: 449  Bit Score: 287.52  E-value: 1.52e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  64 PGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLP 143
Cdd:PRK08044  53 PGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNLD 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 144 DLIPLVKAGVRGFKGFLL---DSGVE-EFPPIGKEYIEEALKVLAEEDTMMMFHAELPK-----AHEDQQQPEQSHREYs 214
Cdd:PRK08044 133 RLHELDEVGVVGFKCFVAtcgDRGIDnDFRDVNDWQFYKGAQKLGELGQPVLVHCENALicdelGEEAKREGRVTAHDY- 211
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 215 sfLSSRPDSFEIDAINLILECLRARNGpvpPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFK 294
Cdd:PRK08044 212 --VASRPVFTEVEAIRRVLYLAKVAGC---RLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAK 286
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 295 CCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNlqkGDFFDSWGGIASVGLGLPLMFTQ-----GCSLVDIVTW 369
Cdd:PRK08044 287 CSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKA---GNIMEAWGGIAGLQNCMDVMFDEavqkrGMSLPMFGKL 363
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 370 CCKNTSHQVGLSHqKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKT 449
Cdd:PRK08044 364 MATNAADIFGLQQ-KGRIAPGKDADFVFIQPNSSYVLKNEDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVA 442

                 ....*..
gi 766121990 450 PLGQTLL 456
Cdd:PRK08044 443 PKGQFIL 449
DHOase_IIb cd01318
Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of ...
60-436 3.09e-73

Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.


Pssm-ID: 238643 [Multi-domain]  Cd Length: 361  Bit Score: 234.54  E-value: 3.09e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVP 139
Cdd:cd01318    2 LLILPGVIDIHVHFREPGLTYKEDFVSGSRAAAAGGVTTVMDMP-NTKPPTTTAEALYEKLRLAAAKSVVDYGLYFGVTG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 140 HnlPDLIPLVKAGVRGFKGFLLDSgvEEFPPIGKEYIEEAlkvLAEEDTMMMFHAELP---KAHEDQQQPEQSHREYssf 216
Cdd:cd01318   81 S--EDLEELDKAPPAGYKIFMGDS--TGDLLDDEETLERI---FAEGSVLVTFHAEDEdrlRENRKELKGESAHPRI--- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 217 lssRPDSFEIDAINLILEcLRARNGpvPPVHIVHLASMKAIPLIRKARASglpVTTETCFHYLCIAAEQIPDGATYFKCC 296
Cdd:cd01318  151 ---RDAEAAAVATARALK-LARRHG--ARLHICHVSTPEELKLIKKAKPG---VTVEVTPHHLFLDVEDYDRLGTLGKVN 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 297 PPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKnlqKGDFFDSWGGIASVGLGLPLMFTQ----GCSLVDIVTWCCK 372
Cdd:cd01318  222 PPLRSREDRKALLQALADGRIDVIASDHAPHTLEEK---RKGYPAAPSGIPGVETALPLMLTLvnkgILSLSRVVRLTSH 298
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 766121990 373 NTSHQVGLShQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRG 436
Cdd:cd01318  299 NPARIFGIK-NKGRIAEGYDADLTVVDLKEERTIRAEEFHSKAGWTPFEGFEVTGFPVMTIVRG 361
Cyclic_amidohydrolases cd01302
Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and ...
60-432 7.67e-66

Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.


Pssm-ID: 238627 [Multi-domain]  Cd Length: 337  Bit Score: 214.95  E-value: 7.67e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNEPGRTSWEG-FETGTQAAISGGVTTVVDMPLNAIPPTTNVENF-RIKLeaAEGQMWCDVGFWGGL 137
Cdd:cd01302    1 LLVLPGFIDIHVHLRDPGGTTYKEdFESGSRAAAAGGVTTVIDMPNTGPPPIDLPAIElKIKL--AEESSYVDFSFHAGI 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 138 VP-HNLPDLIPLVKAGVRGFKGFLLDSGVEEFPpIGKEYIEEALKVLAEEDTMMMFHAELpkahedqqqpeqshreyssf 216
Cdd:cd01302   79 GPgDVTDELKKLFDAGINSLKVFMNYYFGELFD-VDDGTLMRTFLEIASRGGPVMVHAER-------------------- 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 217 lssrpdsfeidAINLILECLRarngpvpPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCC 296
Cdd:cd01302  138 -----------AAQLAEEAGA-------NVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRLNGAWGKVN 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 297 PPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKgDFFDSWGGIASVGLGLPLMFTQ----GCSLVDIVTWCCK 372
Cdd:cd01302  200 PPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESGK-DIWKAPPGFPGLETRLPILLTEgvkrGLSLETLVEILSE 278
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 373 NTSHQVGLsHQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKT 432
Cdd:cd01302  279 NPARIFGL-YPKGTIAVGYDADLVIVDPKKEWKVTAEEIESKADWTPFEGMEVTGKPVST 337
PRK08323 PRK08323
phenylhydantoinase; Validated
60-442 2.36e-65

phenylhydantoinase; Validated


Pssm-ID: 236240 [Multi-domain]  Cd Length: 459  Bit Score: 216.96  E-value: 2.36e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMplnAIPPTTnvENFRIKLEA----AEGQMWCDVGF 133
Cdd:PRK08323  45 KYVMPGGIDPHTHMEMPfgGTVSSDDFETGTRAAACGGTTTIIDF---ALQPKG--QSLREALEAwhgkAAGKAVIDYGF 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 134 ------WGGLVPHNLPDlipLVKAGVRGFKGFL-------LDSGVeefppigkeyIEEALKVLAEEDTMMMFHAElpkaH 200
Cdd:PRK08323 120 hmiitdWNEVVLDEMPE---LVEEGITSFKLFMaykgalmLDDDE----------LLRALQRAAELGALPMVHAE----N 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 201 ED-----QQQPEQSHR---EYSSFlsSRPDSFEIDAINlileclRARN-----GpvPPVHIVHLASMKAIPLIRKARASG 267
Cdd:PRK08323 183 GDaiaylQAKLLAEGKtgpEYHAL--SRPPEVEGEATN------RAIMlaelaG--APLYIVHVSCKEALEAIRRARARG 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 268 LPVTTETCFHYLCIAAE--QIPD---GATYFkCCPPIRSESNRQGLWDALREGVIGSVVSDHSP-CTPELKNLQKGDFfd 341
Cdd:PRK08323 253 QRVFGETCPQYLLLDESeyDGPDwfeGAKYV-MSPPLRDKEHQDALWRGLQDGDLQVVATDHCPfCFEQKKQLGRGDF-- 329
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 342 SW--GGIASVGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASEHKISNSSVYFK 414
Cdd:PRK08323 330 TKipNGTPGVEDRMPLLFSEGVmtgriTLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPNATKTISASTLHSN 409
                        410       420
                 ....*....|....*....|....*...
gi 766121990 415 NKLTAYNGMTVKGTVLKTILRGQVVYTN 442
Cdd:PRK08323 410 VDYNPYEGFEVTGWPVTTLSRGEVVVED 437
PRK02382 PRK02382
dihydroorotase; Provisional
62-440 1.70e-62

dihydroorotase; Provisional


Pssm-ID: 179417 [Multi-domain]  Cd Length: 443  Bit Score: 209.12  E-value: 1.70e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGlVPHN 141
Cdd:PRK02382  52 LLPGGIDVHVHFREPGYTHKETWYTGSRSAAAGGVTTVVDQP-NTDPPTVDGESFDEKAELAARKSIVDFGINGG-VTGN 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 142 LPDLIPLVKAGVRGFkG--FLLDS----GVEEfppigkEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSS 215
Cdd:PRK02382 130 WDPLESLWERGVFAL-GeiFMADStggmGIDE------ELFEEALAEAARLGVLATVHAEDEDLFDELAKLLKGDADADA 202
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 216 FLSSRPDSFEIDAINLILEC---LRARngpvppVHIVHLASMKAIPLIRKARasglpVTTETCFHYLCIAAEQIPDGATY 292
Cdd:PRK02382 203 WSAYRPAAAEAAAVERALEVaseTGAR------IHIAHISTPEGVDAARREG-----ITCEVTPHHLFLSRRDWERLGTF 271
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 293 FKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLqkgDFFDSWGGIASVGLGLPLMFTQGCS-------LVD 365
Cdd:PRK02382 272 GKMNPPLRSEKRREALWERLNDGTIDVVASDHAPHTREEKDA---DIWDAPSGVPGVETMLPLLLAAVRKnrlplerVRD 348
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 766121990 366 IVTWcckNTSHQVGLShQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLkTILRGQVVY 440
Cdd:PRK02382 349 VTAA---NPARIFGLD-GKGRIAEGYDADLVLVDPDAAREIRGDDLHSKAGWTPFEGMEGVFPEL-TMVRGTVVW 418
D-HYD cd01314
D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases ...
60-444 2.42e-62

D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.


Pssm-ID: 238639 [Multi-domain]  Cd Length: 447  Bit Score: 209.00  E-value: 2.42e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDM--PLNAIPPTTNVENFRiklEAAEGQMWCDVGFWG 135
Cdd:cd01314   47 KYVLPGGIDPHTHLELPfmGTVTADDFESGTRAAAAGGTTTIIDFaiPNKGQSLLEAVEKWR---GKADGKSVIDYGFHM 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 136 GLV--PHNLPDLIP-LVKAGVRGFKGFLL--DSGVeefppIGKEYIEEALKVLAEEDTMMMFHAE--------------- 195
Cdd:cd01314  124 IITdwTDSVIEELPeLVKKGISSFKVFMAykGLLM-----VDDEELLDVLKRAKELGALVMVHAEngdviaelqkkllaq 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 196 ---LPKAHEdqqqpeqshreyssflSSRPDSFEIDAINLIleCLRARNGPVPpVHIVHLASMKAIPLIRKARASGLPVTT 272
Cdd:cd01314  199 gktGPEYHA----------------LSRPPEVEAEATARA--IRLAELAGAP-LYIVHVSSKEAADEIARARKKGLPVYG 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 273 ETCFHYLCIAAEQI----PDGATYFkCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIAS 348
Cdd:cd01314  260 ETCPQYLLLDDSDYwkdwFEGAKYV-CSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPG 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 349 VGLGLPLMFTQG--------CSLVDIVtwcCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAY 420
Cdd:cd01314  339 VETRMPLLWSEGvakgritlEKFVELT---STNPAKIFGLYPRKGTIAVGSDADLVIWDPNAEKTISADTHHHNVDYNIF 415
                        410       420
                 ....*....|....*....|....
gi 766121990 421 NGMTVKGTVLKTILRGQVVYTNAN 444
Cdd:cd01314  416 EGMKVKGWPVVTISRGKVVVEDGE 439
pyrC_multi TIGR00857
dihydroorotase, multifunctional complex type; In contrast to the homodimeric type of ...
62-442 7.87e-59

dihydroorotase, multifunctional complex type; In contrast to the homodimeric type of dihydroorotase found in E. coli, this class tends to appear in a large, multifunctional complex with aspartate transcarbamoylase. Homologous domains appear in multifunctional proteins of higher eukaryotes. In some species, including Pseudomonas putida and P. aeruginosa, this protein is inactive but is required as a non-catalytic subunit of aspartate transcarbamoylase (ATCase). In these species, a second, active dihydroorotase is also present. The seed for this model does not include any example of the dihydroorotase domain of eukaryotic multidomain pyrimidine synthesis proteins. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]


Pssm-ID: 273302 [Multi-domain]  Cd Length: 411  Bit Score: 198.82  E-value: 7.87e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGlVPHN 141
Cdd:TIGR00857  37 VLPGFIDLHVHLRDPGEEYKEDIESGSKAAAHGGFTTVADMP-NTKPPIDTPETLEWKLQRLKKVSLVDVHLYGG-VTQG 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  142 LPDLIpLVKAGVRGFKGFLLDSGVEEFPPIGK-EYIEEALKVLAEEDTMMMFHAELP------KAHEDQQQPeqshreyS 214
Cdd:TIGR00857 115 NQGKE-LTEAYELKEAGAVGRMFTDDGSEVQDiLSMRRALEYAAIAGVPIALHAEDPdliyggVMHEGPSAA-------Q 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  215 SFLSSRPDSFEIDAINLILECLRARNGpvpPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFK 294
Cdd:TIGR00857 187 LGLPARPPEAEEVAVARLLELAKHAGC---PVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGK 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  295 CCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQkgdFFDSWGGIASVGLGLPLMFTQGC----SLVDIVTWC 370
Cdd:TIGR00857 264 VNPPLREKEDRLALIEGLKDGIIDIIATDHAPHTLEEKTKE---FAAAPPGIPGLETALPLLLQLLVkgliSLKDLIRML 340
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 766121990  371 CKNTSHQVGLShQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTN 442
Cdd:TIGR00857 341 SINPARIFGLP-DKGTLEEGNPADITVFDLKKEWTINAETFYSKAKNTPFEGMSLKGKPIATILRGKVVYED 411
DHOase_IIa cd01317
Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of ...
60-432 2.63e-57

Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.


Pssm-ID: 238642 [Multi-domain]  Cd Length: 374  Bit Score: 193.61  E-value: 2.63e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVP 139
Cdd:cd01317   10 KILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMP-NTNPVIDNPAVVELLKNRAKDVGIVRVLPIGALTK 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 140 ----HNLPDLIPLVKAGVRGFKgfllDSGveeFPPIGKEYIEEALKVLAEEDTMMMFHAELPK------AHEDqqqpeqs 209
Cdd:cd01317   89 glkgEELTEIGELLEAGAVGFS----DDG---KPIQDAELLRRALEYAAMLDLPIIVHPEDPSlagggvMNEG------- 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 210 hrEYSSF--LSSRPDSFEIDAINLILECLRARNGPVppvHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIP 287
Cdd:cd01317  155 --KVASRlgLPGIPPEAETIMVARDLELAEATGARV---HFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALE 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 288 DGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLqkgDFFDSWGGIASVGLGLPLMFT-----QGCS 362
Cdd:cd01317  230 SYDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDL---PFAEAPPGIIGLETALPLLWTllvkgGLLT 306
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 363 LVDIVTWCCKNTSHQVGLShqKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKT 432
Cdd:cd01317  307 LPDLIRALSTNPAKILGLP--PGRLEVGAPADLVLFDPDAEWIVDEETFRSKSKNTPFDGQKLKGRVLAT 374
pyrC PRK09357
dihydroorotase; Validated
60-440 2.07e-55

dihydroorotase; Validated


Pssm-ID: 236479 [Multi-domain]  Cd Length: 423  Bit Score: 190.02  E-value: 2.07e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVgFW----- 134
Cdd:PRK09357  49 LVVAPGLVDLHVHLREPGQEDKETIETGSRAAAAGGFTTVVAMP-NTKPVIDTPEVVEYVLDRAKEAGLVDV-LPvgait 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 135 GGLVPHNLPDLIPLVKAGVRGFK--GF-LLDSGVeefppigkeyIEEALKVLAEEDTMMMFHAELPK------AHEDqqq 205
Cdd:PRK09357 127 KGLAGEELTEFGALKEAGVVAFSddGIpVQDARL----------MRRALEYAKALDLLIAQHCEDPSlteggvMNEG--- 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 206 peqshrEYSSFL--SSRPDSFEIDAInlileclrARN-------GPvpPVHIVHLASMKAIPLIRKARASGLPVTTETCF 276
Cdd:PRK09357 194 ------EVSARLglPGIPAVAEEVMI--------ARDvllaeatGA--RVHICHVSTAGSVELIRWAKALGIKVTAEVTP 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 277 HYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNlqkGDFFDSWGGIASVGLGLPLM 356
Cdd:PRK09357 258 HHLLLTDEDLLTYDPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHAPHAREEKE---CEFEAAPFGITGLETALSLL 334
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 357 FTQ-----GCSLVDIVTWCCKNTSHQVGLSHqkGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLK 431
Cdd:PRK09357 335 YTTlvktgLLDLEQLLEKMTINPARILGLPA--GPLAEGEPADLVIFDPEAEWTVDGEDFASKGKNTPFIGMKLKGKVVY 412

                 ....*....
gi 766121990 432 TILRGQVVY 440
Cdd:PRK09357 413 TIVDGKIVY 421
PRK09060 PRK09060
dihydroorotase; Validated
61-439 7.89e-55

dihydroorotase; Validated


Pssm-ID: 181632 [Multi-domain]  Cd Length: 444  Bit Score: 188.98  E-value: 7.89e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  61 TILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPH 140
Cdd:PRK09060  53 HVLPGVIDSQVHFREPGLEHKEDLETGSRAAVLGGVTAVFEMP-NTNPLTTTAEALADKLARARHRMHCDFAFYVGGTRD 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 141 NLPDLIPLVKA-GVRGFKGF-------LL---DSGVEefppigkeyieealKVLAEEDTMMMFHAElpkaHEDQQQPEQS 209
Cdd:PRK09060 132 NADELAELERLpGCAGIKVFmgsstgdLLvedDEGLR--------------RILRNGRRRAAFHSE----DEYRLRERKG 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 210 HRE---YSSFLSSRPDSFEIDAINLILEcLRARNGpvPPVHIVHLASMKAIPLIRKARASglpVTTETCFHYLCIAAEQI 286
Cdd:PRK09060 194 LRVegdPSSHPVWRDEEAALLATRRLVR-LARETG--RRIHVLHVSTAEEIDFLADHKDV---ATVEVTPHHLTLAAPEC 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 287 PDG-ATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKnlQKgDFFDSWGGIASVGLGLPLMFT---QG-C 361
Cdd:PRK09060 268 YERlGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGSDHAPHTLEEK--AK-PYPASPSGMTGVQTLVPIMLDhvnAGrL 344
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 766121990 362 SLVDIVTWCCKNTSHQVGLShQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVV 439
Cdd:PRK09060 345 SLERFVDLTSAGPARIFGIA-GKGRIAVGYDADFTIVDLKRRETITNEWIASRCGWTPYDGKEVTGWPVGTIVRGQRV 421
D-hydantoinase TIGR02033
D-hydantoinase; This model represents the D-hydantoinase (dihydropyrimidinase) which primarily ...
27-444 1.32e-52

D-hydantoinase; This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.


Pssm-ID: 273937 [Multi-domain]  Cd Length: 454  Bit Score: 183.36  E-value: 1.32e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   27 ESGKILDVLEGSVVMEKTEItkyeihtlENVSPCTILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDM-- 102
Cdd:TIGR02033  22 EGGKIVAVGDNLIPPDAVEV--------IDATGKYVLPGGIDVHTHLEMPfgGTTTADDFFTGTKAAAAGGTTTIIDFvv 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  103 PLNAIPPTTNVENFRiklEAAEGQMWCDVGFWGGLV---PHNLPDLIP-LVKAGVRGFKGFLLDSGVEEfppIGKEYIEE 178
Cdd:TIGR02033  94 PEKGSSLTEALETWH---EKAEGKSVIDYGFHMDIThwnDSVLEEHIPeVKEEGINSFKVFMAYKNLLM---VDDEELFE 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  179 ALKVLAEEDTMMMFHAE------------------LPKAHEdqqqpeqshreyssflSSRPDSFEIDAINLILECLRARN 240
Cdd:TIGR02033 168 ILKRLKELGALLQVHAEngdiiaelqarmlaqgitGPEYHA----------------LSRPPELEAEAVARAITLAALAD 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  241 GPVppvHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIP----DGATYFkCCPPIRSESNRQGLWDALREGV 316
Cdd:TIGR02033 232 APL---YVVHVSTKDAADEIAQARKKGQPVFGETCPQYLVLDDTHYDkpgfEGAKYV-CSPPLREPEDQDALWSALSSGA 307
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  317 IGSVVSDHSP-CTPELKNLQKGDFFDSWGGIASVGLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPG 390
Cdd:TIGR02033 308 LQTVGSDHCTfNFAQKKAIGKDDFTKIPNGGPGVEERMSLLFDEGVakgriTLEKFVEVTSTNPAKIFNLYPRKGTIAVG 387
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 766121990  391 YDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNAN 444
Cdd:TIGR02033 388 SDADIVIWDPNRTTVISAETHHSNADYNPFEGFKVRGAPVSVLSRGRVVVEDGQ 441
PRK07575 PRK07575
dihydroorotase; Provisional
26-442 1.21e-51

dihydroorotase; Provisional


Pssm-ID: 236055 [Multi-domain]  Cd Length: 438  Bit Score: 180.26  E-value: 1.21e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  26 TESGKILDVLEGSVVMEKTEITKYEIHTLenvspctiLPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlN 105
Cdd:PRK07575  26 VEDGKIVAIAPEISATAVDTVIDAEGLTL--------LPGVIDPQVHFREPGLEHKEDLFTASRACAKGGVTSFLEMP-N 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 106 AIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNLPDLipLVKAGVRGFKGFLLDSG----VEEfppigkeyiEEAL- 180
Cdd:PRK07575  97 TKPLTTTQAALDDKLARAAEKCVVNYGFFIGATPDNLPEL--LTANPTCGIKIFMGSSHgpllVDE---------EAALe 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 181 KVLAEEDTMMMFHAElpkaheDQQQPEQSHREYSSflSSRPDSF-----EIDAINLILECLRARNGPVPPVHIVHLASMK 255
Cdd:PRK07575 166 RIFAEGTRLIAVHAE------DQARIRARRAEFAG--ISDPADHsqiqdEEAALLATRLALKLSKKYQRRLHILHLSTAI 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 256 AIPLIRKARASGlpVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLq 335
Cdd:PRK07575 238 EAELLRQDKPSW--VTAEVTPQHLLLNTDAYERIGTLAQMNPPLRSPEDNEALWQALRDGVIDFIATDHAPHTLEEKAQ- 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 336 kgDFFDSWGGIASVGLGLPLMFTQG----CSLVDIVTWCCKNTSHQVGLSHqKGTIAPGYDADLVVFDTASEHKISNSSV 411
Cdd:PRK07575 315 --PYPNSPSGMPGVETSLPLMLTAAmrgkCTVAQVVRWMSTAVARAYGIPN-KGRIAPGYDADLVLVDLNTYRPVRREEL 391
                        410       420       430
                 ....*....|....*....|....*....|.
gi 766121990 412 YFKNKLTAYNGMTVKGTVLKTILRGQVVYTN 442
Cdd:PRK07575 392 LTKCGWSPFEGWNLTGWPVTTIVGGQIVFDR 422
Amidohydro_1 pfam01979
Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase ...
61-439 1.27e-46

Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilization as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included.


Pssm-ID: 460401 [Multi-domain]  Cd Length: 334  Bit Score: 164.21  E-value: 1.27e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   61 TILPGLVDSHVHLN--------EPGRTSWEGFETGTQAAISGGVTTVVDMPlnaippTTNVENFRIKLEAAEgQMWCDVG 132
Cdd:pfam01979   1 IVLPGLIDAHVHLEmgllrgipVPPEFAYEALRLGITTMLKSGTTTVLDMG------ATTSTGIEALLEAAE-ELPLGLR 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  133 FWGG-------LVPHNLPDLIPLVKAGVRGFKGFLlDSGV------EEFPPIGKEYIEEALKVLAEEDTMMMFHA-ELPK 198
Cdd:pfam01979  74 FLGPgcsldtdGELEGRKALREKLKAGAEFIKGMA-DGVVfvglapHGAPTFSDDELKAALEEAKKYGLPVAIHAlETKG 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  199 AHEDQQQPEQSHREYSSFLSSRPDSFEIDAINLILEclrarngpvppvHIVHLASMKAIPLIRKARASGLPvttetcfhy 278
Cdd:pfam01979 153 EVEDAIAAFGGGIEHGTHLEVAESGGLLDIIKLILA------------HGVHLSPTEANLLAEHLKGAGVA--------- 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  279 LCIAAEQIpdgatyfkccppirSESNRQGLWDALREGVIGSVVSDHSPCtpelknlqkGDFFDSWGGIAsVGLGLPLMFT 358
Cdd:pfam01979 212 HCPFSNSK--------------LRSGRIALRKALEDGVKVGLGTDGAGS---------GNSLNMLEELR-LALELQFDPE 267
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  359 QGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTasehkisnssvyfkNKLTAYNGMTVKGTVLKTILRGQV 438
Cdd:pfam01979 268 GGLSPLEALRMATINPAKALGLDDKVGSIEVGKDADLVVVDL--------------DPLAAFFGLKPDGNVKKVIVKGKI 333

                  .
gi 766121990  439 V 439
Cdd:pfam01979 334 V 334
PRK13404 PRK13404
dihydropyrimidinase; Provisional
62-455 1.04e-45

dihydropyrimidinase; Provisional


Pssm-ID: 184033 [Multi-domain]  Cd Length: 477  Bit Score: 165.26  E-value: 1.04e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  62 ILPGLVDSHVHLNEP---GRTSWEGFETGTQAAISGGVTTV-------VDMPLNAIppttnVENFRIKleaAEGQMWCDV 131
Cdd:PRK13404  52 VLPGGVDSHCHIDQPsgdGIMMADDFYTGTVSAAFGGTTTVipfaaqhRGQSLREA-----VEDYHRR---AAGKAVIDY 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 132 GFwgGLV-----PHNLPDLIP-LVKAGVRGFKGFLLDSGVEefppIGKEYIEEALKVLAEEDTMMMFHAE-------LPK 198
Cdd:PRK13404 124 AF--HLIvadptEEVLTEELPaLIAQGYTSFKVFMTYDDLK----LDDRQILDVLAVARRHGAMVMVHAEnhdmiawLTK 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 199 AHEDQQQPEQSHREyssflSSRPDSFEIDAINLILECLRARNgpvPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHY 278
Cdd:PRK13404 198 RLLAAGLTAPKYHA-----ISRPMLAEREATHRAIALAELVD---VPILIVHVSGREAAEQIRRARGRGLKIFAETCPQY 269
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 279 LCIAAEQIP----DGATYFkCCPPIRSESNRQGLWDALREGVIGSVVSDHSPC---TPELKNLQKGD--FFDSWGGIASV 349
Cdd:PRK13404 270 LFLTAEDLDrpgmEGAKYI-CSPPPRDKANQEAIWNGLADGTFEVFSSDHAPFrfdDTDGKLAAGANpsFKAIANGIPGI 348
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 350 GLGLPLMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMT 424
Cdd:PRK13404 349 ETRLPLLFSEGVvkgriSLNRFVALTSTNPAKLYGLYPRKGAIAIGADADIAIWDPDREVTITNADLHHAADYTPYEGMR 428
                        410       420       430
                 ....*....|....*....|....*....|.
gi 766121990 425 VKGTVLKTILRGQVVYTNANGVSKTPLGQTL 455
Cdd:PRK13404 429 VTGWPVTVLSRGRVVVEDGELVAERGSGQFL 459
PRK01211 PRK01211
dihydroorotase; Provisional
62-453 9.34e-42

dihydroorotase; Provisional


Pssm-ID: 179247 [Multi-domain]  Cd Length: 409  Bit Score: 153.09  E-value: 9.34e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHN 141
Cdd:PRK01211  44 ILPAATDIHVHFRTPGETEKEDFSTGTLSAIFGGTTFIMDMP-NNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSMETGNN 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 142 lpdlIPLVKAGVRGFKGFLLDSGveefPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQPEQSHREYSsflSSRP 221
Cdd:PRK01211 123 ----ALILDERSIGLKVYMGGTT----NTNGTDIEGGEIKKINEANIPVFFHAELSECLRKHQFESKNLRDHD---LARP 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 222 DSFEIDAINLIleclraRNGPVPPVHIVHLASMKAIPlirkarasglPVTTETCFHYLCIAAEqIPDGaTYFKCCPPIRS 301
Cdd:PRK01211 192 IECEIKAVKYV------KNLDLKTKIIAHVSSIDVIG----------RFLREVTPHHLLLNDD-MPLG-SYGKVNPPLRD 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 302 ESNRQGLWDALREGVIGSVVSDHSPCTPElknlQKGDFFDSWGGIASVGLGLPLMF---TQGCSLVDI-VTWCCKNTSHQ 377
Cdd:PRK01211 254 RWTQERLLEEYISGRFDILSSDHAPHTEE----DKQEFEYAKSGIIGVETRVPLFLalvKKKILPLDVlYKTAIERPASL 329
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 766121990 378 VGLshQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTV--KGTVlktILRGQVVYTNANGVSKtPLGQ 453
Cdd:PRK01211 330 FGI--KKGKIEEGYDADFMAFDFTNIKKINDKRLHSKCPVSPFNGFDAifPSHV---IMRGEVVIDNYELISE-RTGK 401
PRK04250 PRK04250
dihydroorotase; Provisional
28-455 2.84e-41

dihydroorotase; Provisional


Pssm-ID: 235265 [Multi-domain]  Cd Length: 398  Bit Score: 151.46  E-value: 2.84e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  28 SGKIL---DVLEGSVVMEKTEITKYEIHTLE-----NVSPCTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTV 99
Cdd:PRK04250   3 EGKFLlkgRIVEGGIGIENGRISKISLRDLKgkeviKVKGGIILPGLIDVHVHLRDFEESYKETIESGTKAALHGGITLV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 100 VDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVgFWGGLVPHNLPDLIPlVKAGVrgFKGFLLdsgveefPPIGKEYIEEA 179
Cdd:PRK04250  83 FDMP-NTKPPIMDEKTYEKRMRIAEKKSYADY-ALNFLIAGNCEKAEE-IKADF--YKIFMG-------ASTGGIFSENF 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 180 LKVLAEEDTMMMFHAELPkahedqqqpeqshrEYSSFLSSRPDSFEIDAINlilECLRARNGPVPPVHIVHLASMKAIPL 259
Cdd:PRK04250 151 EVDYACAPGIVSVHAEDP--------------ELIREFPERPPEAEVVAIE---RALEAGKKLKKPLHICHISTKDGLKL 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 260 IRKaraSGLP-VTTETCFHYLCIAAEQIPDGaTYFKCCPPIRSESNRQGLWDALREgvIGSVVSDHSPCTPELKnlQKGD 338
Cdd:PRK04250 214 ILK---SNLPwVSFEVTPHHLFLTRKDYERN-PLLKVYPPLRSEEDRKALWENFSK--IPIIASDHAPHTLEDK--EAGA 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 339 ffdswGGIASVGLGLPLMF---TQG-CSLVDIVTWCCKNTSHQVGLSHqKGtIAPGYDADLVVFDTASEHKISNSSVYFK 414
Cdd:PRK04250 286 -----AGIPGLETEVPLLLdaaNKGmISLFDIVEKMHDNPARIFGIKN-YG-IEEGNYANFAVFDMKKEWTIKAEELYTK 358
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|.
gi 766121990 415 NKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKtPLGQTL 455
Cdd:PRK04250 359 AGWTPYEGFKLKGKVIMTILRGEVVMEDDEIIGK-PRGVRI 398
PRK09236 PRK09236
dihydroorotase; Reviewed
63-459 1.30e-37

dihydroorotase; Reviewed


Pssm-ID: 181716  Cd Length: 444  Bit Score: 142.32  E-value: 1.30e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  63 LPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHNL 142
Cdd:PRK09236  53 LPGMIDDQVHFREPGLTHKGDIASESRAAVAGGITSFMEMP-NTNPPTTTLEALEAKYQIAAQRSLANYSFYFGATNDNL 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 143 PDLIPLVKAGVRGFKGFLLDS-G---VEEfppigkeyiEEAL-KVLAEEDTMMMFHAElpkaHED--QQQPEQSHREYSs 215
Cdd:PRK09236 132 DEIKRLDPKRVCGVKVFMGAStGnmlVDN---------PETLeRIFRDAPTLIATHCE----DTPtiKANLAKYKEKYG- 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 216 flssrpDSFEIDAINLILE---CLR-------------ARngpvppVHIVHLASMKAIPLIRKARASGLPVTTETCFHYL 279
Cdd:PRK09236 198 ------DDIPAEMHPLIRSaeaCYKssslavslakkhgTR------LHVLHISTAKELSLFENGPLAEKRITAEVCVHHL 265
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 280 CIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKnlqKGDFFDSWGGIASVGLGLPLMF-- 357
Cdd:PRK09236 266 WFDDSDYARLGNLIKCNPAIKTASDREALRQALADDRIDVIATDHAPHTWEEK---QGPYFQAPSGLPLVQHALPALLel 342
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 358 -TQG-CSLVDIVtwccKNTSHQVGLS---HQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKT 432
Cdd:PRK09236 343 vHEGkLSLEKVV----EKTSHAPAILfdiKERGFIREGYWADLVLVDLNSPWTVTKENILYKCGWSPFEGRTFRSRVATT 418
                        410       420
                 ....*....|....*....|....*..
gi 766121990 433 ILRGQVVYTNaNGVSKTPLGQTLLDSR 459
Cdd:PRK09236 419 FVNGQLVYHN-GQLVESCRGQRLEFDR 444
pyrC PRK00369
dihydroorotase; Provisional
62-446 9.85e-33

dihydroorotase; Provisional


Pssm-ID: 234738 [Multi-domain]  Cd Length: 392  Bit Score: 127.96  E-value: 9.85e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGlVPHN 141
Cdd:PRK00369  45 ILPGAIDLHVHLRGLKLSYKEDVASGTSEAAYGGVTLVADMP-NTIPPLNTPEAITEKLAELEYYSRVDYFVYSG-VTKD 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 142 LPDLIPLvkaGVRGFKGFLLDsgVEEfppigkeyiEEALKVLAEEDTMMMFHAELPKAhedqQQPEQSHReyssflssRP 221
Cdd:PRK00369 123 PEKVDKL---PIAGYKIFPED--LER---------EETFRVLLKSRKLKILHPEVPLA----LKSNRKLR--------RN 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 222 DSFEIDAINLILECLRarngpvppVHIVHLASmkaIPLIRKARASGLpvTTETCFHYLCIAAEqipdGATYFKCCPPIRS 301
Cdd:PRK00369 177 CWYEIAALYYVKDYQN--------VHITHASN---PRTVRLAKELGF--TVDITPHHLLVNGE----KDCLTKVNPPIRD 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 302 ESNRQGLWDALREgvIGSVVSDHSPCTPElknlQKGDFFDSW-GGIASVGLGLP----LMFTQGCSLVDIVTWCCKNTSH 376
Cdd:PRK00369 240 INERLWLLQALSE--VDAIASDHAPHSSF----EKLQPYEVCpPGIAALSFTPPfiytLVSKGILSIDRAVELISTNPAR 313
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 377 QVGLSHqkGTIAPGYDADLVVFdtaSEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGV 446
Cdd:PRK00369 314 ILGIPY--GEIKEGYRANFTVI---QFEDWRYSTKYSKVIETPLDGFELKASVYATIVQGKLAYLEGEVF 378
CAD_DHOase cd01316
The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate ...
62-452 1.47e-30

The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.


Pssm-ID: 238641 [Multi-domain]  Cd Length: 344  Bit Score: 121.02  E-value: 1.47e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  62 ILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHN 141
Cdd:cd01316    4 RLPGLIDVHVHLREPGATHKEDFASGTKAALAGGFTMVRAMP-NTNPSIVDVASLKLVQSLAQAKARCDYAFSIGATSTN 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 142 LPDLIPLVKAGVrGFKGFLLdsgvEEFPPIGKEyieealKVLAEEDTMMMFHAELP-KAHEDQQqpeqshreyssflssr 220
Cdd:cd01316   83 AATVGELASEAV-GLKFYLN----ETFSTLILD------KITAWASHFNAWPSTKPiVTHAKSQ---------------- 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 221 pdsfEIDAInLILECLRARNgpvppVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGAtyFKCCPPIR 300
Cdd:cd01316  136 ----TLAAV-LLLASLHNRS-----IHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPRGQ--YEVRPFLP 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 301 SESNRQGLWDALreGVIGSVVSDHSPCTPELKNLQKGDFfdswgGIASVGLGLPLMFT---QG-CSLVDIVTWCCKNTSH 376
Cdd:cd01316  204 TREDQEALWENL--DYIDCFATDHAPHTLAEKTGNKPPP-----GFPGVETSLPLLLTavhEGrLTIEDIVDRLHTNPKR 276
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 766121990 377 QVGLSHQKGTIapgydadlVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYTNANGVSKTPLG 452
Cdd:cd01316  277 IFNLPPQSDTY--------VEVDLDEEWTIPKNPLQSKKGWTPFEGKKVKGKVQRVVLRGETAFIDGEIVAPPGFG 344
PLN02942 PLN02942
dihydropyrimidinase
62-442 5.78e-30

dihydropyrimidinase


Pssm-ID: 178530  Cd Length: 486  Bit Score: 121.87  E-value: 5.78e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  62 ILPGLVDSHVHLNEP--GRTSWEGFETGTQAAISGGVTTVVDMplnAIPPTTNV----ENFRIKLEAAEgqmwCDVGF-- 133
Cdd:PLN02942  55 VMPGGIDPHTHLAMPfmGTETIDDFFSGQAAALAGGTTMHIDF---VIPVNGNLlagyEAYEKKAEKSC----MDYGFhm 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 134 ----WGGLVPHnlpDLIPLVKA-GVRGFKGFLLDSGVEEfppIGKEYIEEALKVLAEEDTMMMFHAELPKAHEDQQQ--- 205
Cdd:PLN02942 128 aitkWDDTVSR---DMETLVKEkGINSFKFFMAYKGSLM---VTDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKrmi 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 206 ------PEqSHReyssflSSRPDSFEIDAINLILECLRARNgpvPPVHIVHLASMKAIPLIRKARASGLPVTTETCFHYL 279
Cdd:PLN02942 202 elgitgPE-GHA------LSRPPLLEGEATARAIRLAKFVN---TPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGL 271
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 280 CIAAEQI--PD--GATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSP-CTPElKNLQKGDFFDSWGGIASVGLGLP 354
Cdd:PLN02942 272 VLDDSKLwdPDftIASKYVMSPPIRPAGHGKALQAALSSGILQLVGTDHCPfNSTQ-KAFGKDDFRKIPNGVNGIEERMH 350
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 355 LMFTQGC-----SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTV 429
Cdd:PLN02942 351 LVWDTMVesgqiSPTDYVRVTSTECAKIFNIYPRKGAILAGSDADIIILNPNSTFTISAKTHHSRIDTNVYEGRRGKGKV 430
                        410
                 ....*....|...
gi 766121990 430 LKTILRGQVVYTN 442
Cdd:PLN02942 431 EVTISQGRVVWEN 443
PRK07369 PRK07369
dihydroorotase; Provisional
30-432 6.02e-28

dihydroorotase; Provisional


Pssm-ID: 236002 [Multi-domain]  Cd Length: 418  Bit Score: 115.08  E-value: 6.02e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  30 KILDVLEGSVVMEKTEITKYEIHTLENVSPCT--IL-PGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPlNA 106
Cdd:PRK07369  20 RIADVLIEDGKIQAIEPHIDPIPPDTQIIDASglILgPGLVDLYSHSGEPGFEERETLASLAAAAAAGGFTRVAILP-DT 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 107 IPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVPHN----LPDLIPLVKAGVRGFKgfllDSGVEEFPPIgkeyIEEALKV 182
Cdd:PRK07369  99 FPPLDNPATLARLQQQAQQIPPVQLHFWGALTLGGqgkqLTELAELAAAGVVGFT----DGQPLENLAL----LRRLLEY 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 183 LAEEDTMMMFHAELPkahedQQQPEQSHRE-YSSF---LSSRPDSFEIDAINLILECLRARNgpvPPVHIVHLASMKAIP 258
Cdd:PRK07369 171 LKPLGKPVALWPCDR-----SLAGNGVMREgLLALrlgLPGDPASAETTALAALLELVAAIG---TPVHLMRISTARSVE 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 259 LIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQkgd 338
Cdd:PRK07369 243 LIAQAKARGLPITASTTWMHLLLDTEALASYDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAIDHAPYTYEEKTVA--- 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 339 FFDSWGGIASVGLGLPLMFTQgcsLVDIVTWC--------CKNTSHQVGLSHqkGTIAPGYDADLVVFDTASEHKISNSS 410
Cdd:PRK07369 320 FAEAPPGAIGLELALPLLWQN---LVETGELSalqlwqalSTNPARCLGQEP--PSLAPGQPAELILFDPQKTWTVSAQT 394
                        410       420
                 ....*....|....*....|..
gi 766121990 411 VYFKNKLTAYNGMTVKGTVLKT 432
Cdd:PRK07369 395 LHSLSRNTPWLGQTLKGRVLQT 416
PRK07627 PRK07627
dihydroorotase; Provisional
60-443 2.95e-26

dihydroorotase; Provisional


Pssm-ID: 181059 [Multi-domain]  Cd Length: 425  Bit Score: 110.15  E-value: 2.95e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVdmplnaIPPTTN--------VENFRIKLEAAEGQMWCDV 131
Cdd:PRK07627  51 LIVCPGLVDLSARLREPGYEYKATLESEMAAAVAGGVTSLV------CPPDTDpvldepglVEMLKFRARNLNQAHVYPL 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 132 G-FWGGLVPHNLPDLIPLVKAGVRGFkgflldsGVEEFPPIGKEYIEEALKV---------LAEEDtmmMFHAELPKAHE 201
Cdd:PRK07627 125 GaLTVGLKGEVLTEMVELTEAGCVGF-------SQANVPVVDTQVLLRALQYastfgftvwLRPLD---AFLGRGGVAAS 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 202 DqqqpeqshrEYSSF--LSSRPDSFEIDAINLILECLR---ARngpvppVHIVHLASMKAIPLIRKARASGLPVTTETCF 276
Cdd:PRK07627 195 G---------AVASRlgLSGVPVAAETIALHTIFELMRvtgAR------VHLARLSSAAGVALVRAAKAEGLPVTCDVGV 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 277 HYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQkgdFFDSWGGIASVGLGLPLM 356
Cdd:PRK07627 260 NHVHLIDVDIGYFDSQFRLDPPLRSQRDREAIRAALADGTIDAICSDHTPVDDDEKLLP---FAEATPGATGLELLLPLT 336
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 357 FTQGC-SLVDIVTWCCKNTSHQVG-LSHQKGTIAPGYDADLVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTIL 434
Cdd:PRK07627 337 LKWADeAKVPLARALARITSAPARvLGLPAGRLAEGAPADLCVFDPDAHWRVEPRALKSQGKNTPFLGYELPGRVRATLV 416

                 ....*....
gi 766121990 435 RGQVVYTNA 443
Cdd:PRK07627 417 AGQVAFERR 425
PRK09059 PRK09059
dihydroorotase; Validated
27-441 1.27e-21

dihydroorotase; Validated


Pssm-ID: 181631 [Multi-domain]  Cd Length: 429  Bit Score: 96.64  E-value: 1.27e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  27 ESGKILDVLEGSV---VMEKTEITkyeihtleNVSPCTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMP 103
Cdd:PRK09059  28 EDGVIVAAGKGAGnqgAPEGAEIV--------DCAGKAVAPGLVDARVFVGEPGAEHRETIASASRAAAAGGVTSIIMMP 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 104 lNAIPPTTNVENFRIKLEAAEGQmwcdvgfwgGLVphNLPDLIPLVKaGVRGFK----GFLLDSGVEEFppigkeyiEEA 179
Cdd:PRK09059 100 -DTDPVIDDVALVEFVKRTARDT---------AIV--NIHPAAAITK-GLAGEEmtefGLLRAAGAVAF--------TDG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 180 LKVLAeeDTMMMFHA-------ELPKAHEDQQ-----QPEQSHREYSSFL--SSRPDsfEIDAINL-----ILECLRARn 240
Cdd:PRK09059 159 RRSVA--NTQVMRRAltyardfDAVIVHETRDpdlggNGVMNEGLFASWLglSGIPR--EAEVIPLerdlrLAALTRGR- 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 241 gpvppVHIVHLASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSV 320
Cdd:PRK09059 234 -----YHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIGEYRTFFKLSPPLRTEDDRVAMVEAVASGTIDII 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 321 VSDHSPCTPELKNLQkgdFFDSWGGiaSVGL------GLPLMFTQGCSLVDIVTWCCKNTSHQVGLShqKGTIAPGYDAD 394
Cdd:PRK09059 309 VSSHDPQDVDTKRLP---FSEAAAG--AIGLetllaaALRLYHNGEVPLLRLIEALSTRPAEIFGLP--AGTLKPGAPAD 381
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 766121990 395 LVVFDTASEHKISNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVYT 441
Cdd:PRK09059 382 IIVIDLDEPWVVDPEDLKSRSKNTPFEEARFQGRVVRTIVAGKTVYE 428
PRK08417 PRK08417
metal-dependent hydrolase;
251-440 4.36e-20

metal-dependent hydrolase;


Pssm-ID: 236262 [Multi-domain]  Cd Length: 386  Bit Score: 91.69  E-value: 4.36e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 251 LASMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPE 330
Cdd:PRK08417 203 LALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLEALKEGKIDFLTSLHSAKSNS 282
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 331 LKNLQkgdFFDSWGGIASVGLGLPLMFT----QG-CSLVDIVTWCCKNTSHQVGLshQKGTIAPGYDADLVVFDtasehk 405
Cdd:PRK08417 283 KKDLA---FDEAAFGIDSICEYFSLCYTylvkEGiITWSELSRFTSYNPAQFLGL--NSGEIEVGKEADLVLFD------ 351
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 766121990 406 iSNSSVYFKNKLTAYNGMTVKGTVLKTILRGQVVY 440
Cdd:PRK08417 352 -PNESTIIDDNFSLYSGDELYGKIEAVIIKGKLYL 385
metallo-dependent_hydrolases cd01292
Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a ...
66-271 7.42e-14

Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.


Pssm-ID: 238617 [Multi-domain]  Cd Length: 275  Bit Score: 71.60  E-value: 7.42e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  66 LVDSHVHL----NEPGRTSWEG--------------FETGTQAAISGGVTTVVDMPlNAIPPTTNVENFRIKLEAAEGQM 127
Cdd:cd01292    1 FIDTHVHLdgsaLRGTRLNLELkeaeelspedlyedTLRALEALLAGGVTTVVDMG-STPPPTTTKAAIEAVAEAARASA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 128 WCDVGFWGGL-----------VPHNLPDLIPLVKAGVRGFKGFLLDSGVEEFPpigkEYIEEALKVLAEEDTMMMFHAEL 196
Cdd:cd01292   80 GIRVVLGLGIpgvpaavdedaEALLLELLRRGLELGAVGLKLAGPYTATGLSD----ESLRRVLEEARKLGLPVVIHAGE 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 197 PKAH-----EDQQQPEQSHREYSSfLSSRPDSFEidainliLECLRARNGPV---PPVHIVHLASMKAIPLIRKARASGL 268
Cdd:cd01292  156 LPDPtraleDLVALLRLGGRVVIG-HVSHLDPEL-------LELLKEAGVSLevcPLSNYLLGRDGEGAEALRRLLELGI 227

                 ...
gi 766121990 269 PVT 271
Cdd:cd01292  228 RVT 230
Met_dep_hydrolase_C cd01309
Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent ...
62-399 5.28e-09

Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.


Pssm-ID: 238634 [Multi-domain]  Cd Length: 359  Bit Score: 57.71  E-value: 5.28e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  62 ILPGLVDSHVHL--------------NE------PGRTSWEGF---ETGTQAAISGGVTTVVDMPLNAippttNVEnfri 118
Cdd:cd01309   27 VTPGLIDAHSHLgldeeggvretsdaNEetdpvtPHVRAIDGInpdDEAFKRARAGGVTTVQVLPGSA-----NLI---- 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 119 kleaaeGQMWCDVGFWGGLVPHNLPDliplvkaGVRGFKGFLldsgvEEFPPI--GKEYIEEALKVlaeeDTMMMFHAEL 196
Cdd:cd01309   98 ------GGQGVVIKTDGGTIEDMFIK-------APAGLKMAL-----GENPKRvyGGKGKEPATRM----GVAALLRDAF 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 197 PKAHEDqqqpeqsHREYSSFLSSRPDSFEIDainLILECL-RARNGPVPpVHI-VHLAS-MKAipLIRKARASGLPVTTE 273
Cdd:cd01309  156 IKAQEY-------GRKYDLGKNAKKDPPERD---LKLEALlPVLKGEIP-VRIhAHRADdILT--AIRIAKEFGIKITIE 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 274 TCFH-YLC---IAAEQIP--DGATYFkccPPIRSESNRQGLWDA--LRE--GVIGSVVSDHSPCTPELKNLQKGdffdsw 343
Cdd:cd01309  223 HGAEgYKLadeLAKHGIPviYGPTLT---LPKKVEEVNDAIDTNayLLKkgGVAFAISSDHPVLNIRNLNLEAA------ 293
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 766121990 344 ggiASVGLGLPLmfTQGCSLVDIvtwcckNTSHQVGLSHQKGTIAPGYDADLVVFD 399
Cdd:cd01309  294 ---KAVKYGLSY--EEALKAITI------NPAKILGIEDRVGSLEPGKDADLVVWN 338
HutI COG1228
Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport ...
7-399 1.75e-07

Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440841 [Multi-domain]  Cd Length: 386  Bit Score: 53.04  E-value: 1.75e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   7 TSDHVIinganKPATIVysTESGKILDVLEGSVVMEKTEitkYEIHtleNVSPCTILPGLVDSHVHLNEPGRTSWEGFET 86
Cdd:COG1228   21 TGGGVI-----ENGTVL--VEDGKIAAVGPAADLAVPAG---AEVI---DATGKTVLPGLIDAHTHLGLGGGRAVEFEAG 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  87 GT---------------QAAISGGVTTVVDMPLNaippttnveNFRIKLEAAEGQMWCDVG-----------FWGGLVPH 140
Cdd:COG1228   88 GGitptvdlvnpadkrlRRALAAGVTTVRDLPGG---------PLGLRDAIIAGESKLLPGprvlaagpalsLTGGAHAR 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 141 NLPDLIPLV----KAGVRGFKGFlLDSGVEEFPPigkeyiEEALKVLAEE---DTMMMFHAElpkahedqqqpeqshrey 213
Cdd:COG1228  159 GPEEARAALrellAEGADYIKVF-AEGGAPDFSL------EELRAILEAAhalGLPVAAHAH------------------ 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 214 ssflssrpdsfEIDAINLILEClrarnGpvppVH-IVHLASMKAiPLIRKARASGLPVTTETCFHYLCIAAEQIPDGATy 292
Cdd:COG1228  214 -----------QADDIRLAVEA-----G----VDsIEHGTYLDD-EVADLLAEAGTVVLVPTLSLFLALLEGAAAPVAA- 271
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 293 fkccppiRSESNRQGLWDALRE----GV---IGsvvSDHspctpelknlqkgdffdswGGIASVGLGLPLMFTQGC---- 361
Cdd:COG1228  272 -------KARKVREAALANARRlhdaGVpvaLG---TDA-------------------GVGVPPGRSLHRELALAVeagl 322
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 766121990 362 SLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFD 399
Cdd:COG1228  323 TPEEALRAATINAAKALGLDDDVGSLEPGKLADLVLLD 360
Met_dep_hydrolase_B cd01307
Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent ...
60-406 1.76e-06

Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.


Pssm-ID: 238632 [Multi-domain]  Cd Length: 338  Bit Score: 49.63  E-value: 1.76e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  60 CTILPGLVDSHVHLNepgrtsWEGFETGTQA---AISGGVTTVVDMplnAIPPTTNVENFRIKL-EAAEGQMWC--DVGF 133
Cdd:cd01307   30 CYVSPGWIDLHVHVY------QGGTRYGDRPdmiGVKSGVTTVVDA---GSAGADNIDGFRYTViERSATRVYAflNISR 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 134 WGGLVPHNLPDL----IPLVKAGVRGFKGFL----LDSGVEEFPPIGKEYIEEALKVLAEEDTMMMfhaelpkAHEDQQQ 205
Cdd:cd01307  101 VGLVAQDELPDPdnidEDAVVAAAREYPDVIvglkARASKSVVGEWGIKPLELAKKIAKEADLPLM-------VHIGSPP 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 206 PEQShrEYSSFLssRPDsfeidaiNLILECLRAR-NGPVPPVHIVHlasmkaiPLIRKARASGLPV-----TTETCFHyl 279
Cdd:cd01307  174 PILD--EVVPLL--RRG-------DVLTHCFNGKpNGIVDEEGEVL-------PLVRRARERGVIFdvghgTASFSFR-- 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 280 ciAAEQipdgatyfkccppirsesnrqglwdALREGVIGSVVSDHSPCtpelKNLQKGDFFDswggiasvglGLPLM--- 356
Cdd:cd01307  234 --VARA-------------------------AIAAGLLPDTISSDIHG----RNRTNGPVYA----------LATTLskl 272
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 766121990 357 FTQGCSLVDIVTWCCKNTSHQVGLSHqKGTIAPGYDADLVVFDTASEHKI 406
Cdd:cd01307  273 LALGMPLEEVIEAVTANPARMLGLAE-IGTLAVGYDADLTVFDLKDGRVE 321
NagA COG1820
N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism];
360-399 7.71e-06

N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism];


Pssm-ID: 441425 [Multi-domain]  Cd Length: 373  Bit Score: 47.79  E-value: 7.71e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 766121990 360 GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFD 399
Cdd:COG1820  321 GLPLEEAVRMASLNPARALGLDDRKGSIAPGKDADLVVLD 360
NagA cd00854
N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl ...
360-399 1.17e-05

N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.


Pssm-ID: 238434 [Multi-domain]  Cd Length: 374  Bit Score: 47.19  E-value: 1.17e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 766121990 360 GCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFD 399
Cdd:cd00854  323 GCPLEEAVRMASLNPAKLLGLDDRKGSLKPGKDADLVVLD 362
YtcJ COG1574
Predicted amidohydrolase YtcJ [General function prediction only];
376-440 1.31e-05

Predicted amidohydrolase YtcJ [General function prediction only];


Pssm-ID: 441182 [Multi-domain]  Cd Length: 535  Bit Score: 47.49  E-value: 1.31e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 766121990 376 HQVGLSHQKGTIAPGYDADLVVFD----TASEHKISNSsvyfknkltayngmtvkgTVLKTILRGQVVY 440
Cdd:COG1574  482 YAAFEEDEKGSLEPGKLADFVVLDrdplTVPPEEIKDI------------------KVLLTVVGGRVVY 532
Amidohydro_3 pfam07969
Amidohydrolase family;
93-440 3.04e-05

Amidohydrolase family;


Pssm-ID: 400360 [Multi-domain]  Cd Length: 464  Bit Score: 46.37  E-value: 3.04e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990   93 SGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVP--HNLPDLIPLVKAGVRGFKGFLLDSGVEEFPP 170
Cdd:pfam07969 162 GFGITSVDGGGGNVHSLDDYEPLRELTAAEKLKELLDAPERLGLPHSiyELRIGAMKLFADGVLGSRTAALTEPYFDAPG 241
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  171 IG-KEYIEEALKVLAEedtmmmfhaelpKAHEDQQQPEQsHREYSSFLSSRPDSFEIdainlilecLRARNGPVPPVHIV 249
Cdd:pfam07969 242 TGwPDFEDEALAELVA------------AARERGLDVAI-HAIGDATIDTALDAFEA---------VAEKLGNQGRVRIE 299
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  250 HLASMKAIP--LIRKARASGLPVTTETCFHYLCIAAEQIPDGAtyfkccppirsesNRQGLWDALRE----GVIGSVVSD 323
Cdd:pfam07969 300 HAQGVVPYTysQIERVAALGGAAGVQPVFDPLWGDWLQDRLGA-------------ERARGLTPVKEllnaGVKVALGSD 366
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  324 hSPCTPelknlqkgdfFDSWGGI------ASVGLGLPLMFTQGCSLVDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVV 397
Cdd:pfam07969 367 -APVGP----------FDPWPRIgaavmrQTAGGGEVLGPDEELSLEEALALYTSGPAKALGLEDRKGTLGVGKDADLVV 435
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 766121990  398 FDtasehkisnssvyfknkltaYNGMTVK------GTVLKTILRGQVVY 440
Cdd:pfam07969 436 LD--------------------DDPLTVDppaiadIRVRLTVVDGRVVY 464
ureC PRK13308
urease subunit alpha; Reviewed
64-157 3.01e-04

urease subunit alpha; Reviewed


Pssm-ID: 183965 [Multi-domain]  Cd Length: 569  Bit Score: 43.16  E-value: 3.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  64 PGLVDSHVHLNEPGRtswegfetgTQAAISGGVTTVVDMPLNAIPP--TTNVENFRIKLEAAEGqmW-CDVGFWGGLVPH 140
Cdd:PRK13308 133 PGAIDVHVHFDSAQL---------VDHALASGITTMLGGGLGPTVGidSGGPFNTGRMLQAAEA--WpVNFGFLGRGNSS 201
                         90
                 ....*....|....*..
gi 766121990 141 NLPDLIPLVKAGVRGFK 157
Cdd:PRK13308 202 KPAALIEQVEAGACGLK 218
COG3964 COG3964
Predicted amidohydrolase [General function prediction only];
10-101 3.79e-04

Predicted amidohydrolase [General function prediction only];


Pssm-ID: 443164 [Multi-domain]  Cd Length: 376  Bit Score: 42.46  E-value: 3.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  10 HVI--INGANKPATIVYSteSGKILDVlegsvvmeKTEITKYEIHTLENVSPCTILPGLVDSHVHLNePGRTSWegfetG 87
Cdd:COG3964    8 RVIdpANGIDGVMDIAIK--DGKIAAV--------AKDIDAAEAKKVIDASGLYVTPGLIDLHTHVF-PGGTDY-----G 71
                         90
                 ....*....|....*..
gi 766121990  88 TQA---AISGGVTTVVD 101
Cdd:COG3964   72 VDPdgvGVRSGVTTVVD 88
SsnA COG0402
Cytosine/adenosine deaminase or related metal-dependent hydrolase [Nucleotide transport and ...
27-404 4.54e-04

Cytosine/adenosine deaminase or related metal-dependent hydrolase [Nucleotide transport and metabolism, General function prediction only]; Cytosine/adenosine deaminase or related metal-dependent hydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 440171 [Multi-domain]  Cd Length: 416  Bit Score: 42.51  E-value: 4.54e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  27 ESGKILDVLEGSVVMEKteitkYEIHTLENVSPCTILPGLVDSHVH------------------LNE---PGRTSW--EG 83
Cdd:COG0402   27 EDGRIAAVGPGAELPAR-----YPAAEVIDAGGKLVLPGLVNTHTHlpqtllrgladdlplldwLEEyiwPLEARLdpED 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  84 FETGTQAA----ISGGVTTVVDM------PLNAIppttnvenfrikLEAAE--------GQMWCDVGFWGGLVpHNLPDL 145
Cdd:COG0402  102 VYAGALLAlaemLRSGTTTVADFyyvhpeSADAL------------AEAAAeagiravlGRGLMDRGFPDGLR-EDADEG 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 146 IPLVKAGVRGFKGFLlDSGVE-----EFPP-IGKEYIEEALKVLAEEDTMMMFHAelpkaHEDQQQPEQSHREYS----- 214
Cdd:COG0402  169 LADSERLIERWHGAA-DGRIRvalapHAPYtVSPELLRAAAALARELGLPLHTHL-----AETRDEVEWVLELYGkrpve 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 215 -----SFLSSR--------PDSFEIDAInlileclrARNGpvppVHIVH-------LASmkAIPLIRKARASGLPVttet 274
Cdd:COG0402  243 yldelGLLGPRtllahcvhLTDEEIALL--------AETG----ASVAHcptsnlkLGS--GIAPVPRLLAAGVRV---- 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 275 cfhylCIAAeqipDGAtyfkccppirSESNRQGLWDALREGVIGSVVSDHSPctpelknlqkgDFFDSWggiasvglglp 354
Cdd:COG0402  305 -----GLGT----DGA----------ASNNSLDMFEEMRLAALLQRLRGGDP-----------TALSAR----------- 343
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 766121990 355 lmftqgcslvDIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFDTASEH 404
Cdd:COG0402  344 ----------EALEMATLGGARALGLDDEIGSLEPGKRADLVVLDLDAPH 383
Imidazolone-5PH cd01296
Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third ...
247-402 5.60e-04

Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.


Pssm-ID: 238621 [Multi-domain]  Cd Length: 371  Bit Score: 41.86  E-value: 5.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 247 HIVHLaSMKAIPLIRKARASG--LPVTTetcfHYLCiaaeqipdgATYfkccPPIRsesnrqglwDALREGVIGSVVSDH 324
Cdd:cd01296  235 HLEHT-SDEGIAALAEAGTVAvlLPGTA----FSLR---------ETY----PPAR---------KLIDAGVPVALGTDF 287
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990 325 SPCTPelknlqkgdFFDSwggiasvglgLPLMFTQGCSLV-----DIVTWCCKNTSHQVGLSHQKGTIAPGYDADLVVFD 399
Cdd:cd01296  288 NPGSS---------PTSS----------MPLVMHLACRLMrmtpeEALTAATINAAAALGLGETVGSLEVGKQADLVILD 348

                 ...
gi 766121990 400 TAS 402
Cdd:cd01296  349 APS 351
PRK09061 PRK09061
D-glutamate deacylase; Validated
245-274 1.88e-03

D-glutamate deacylase; Validated


Pssm-ID: 236369 [Multi-domain]  Cd Length: 509  Bit Score: 40.45  E-value: 1.88e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 766121990 245 PVHIVHLASM------KAIPLIRKARASGLPVTTET 274
Cdd:PRK09061 247 HMHICHVNSTslrdidRCLALVEKAQAQGLDVTTEA 282
AdeC COG1001
Adenine deaminase [Nucleotide transport and metabolism];
359-422 2.22e-03

Adenine deaminase [Nucleotide transport and metabolism];


Pssm-ID: 440625 [Multi-domain]  Cd Length: 559  Bit Score: 40.47  E-value: 2.22e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 766121990 359 QGCSLVDIVTWCCKNTSHQVGLSHqKGTIAPGYDADLVVFDTASEHKIsnSSVYFKNKLTAYNG 422
Cdd:COG1001  282 LGLDPVTAIQMATLNAAEHFGLKD-LGAIAPGRRADIVLLDDLEDFKV--EKVYADGKLVAEDG 342
PRK09237 PRK09237
amidohydrolase/deacetylase family metallohydrolase;
56-101 2.68e-03

amidohydrolase/deacetylase family metallohydrolase;


Pssm-ID: 236423 [Multi-domain]  Cd Length: 380  Bit Score: 39.83  E-value: 2.68e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 766121990  56 NVSPCTILPGLVDSHVHlNEPGRTSWE------GFETgtqaaisgGVTTVVD 101
Cdd:PRK09237  45 DLSGLYVSPGWIDLHVH-VYPGSTPYGdepdevGVRS--------GVTTVVD 87
Met_dep_hydrolase_A cd01299
Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent ...
61-102 3.33e-03

Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.


Pssm-ID: 238624 [Multi-domain]  Cd Length: 342  Bit Score: 39.58  E-value: 3.33e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 766121990  61 TILPGLVDSHVHL---NEPGRTSWEG---FETGT-----QAAISGGVTTVVDM 102
Cdd:cd01299   10 TLMPGLIDAHTHLgsdPGDLPLDLALpveYRTIRatrqaRAALRAGFTTVRDA 62
Urease_alpha cd00375
Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis ...
65-157 3.42e-03

Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.


Pssm-ID: 238221 [Multi-domain]  Cd Length: 567  Bit Score: 39.62  E-value: 3.42e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  65 GLVDSHVHLNEPgRTSWEGFETGTQAAISGGvTTVVDmPLNAIPPTTNVENFRIKLEAAEGqMWCDVGFWGGLVPHNLPD 144
Cdd:cd00375  130 GGIDTHVHFICP-QQIEEALASGITTMIGGG-TGPAA-GTKATTCTPGPWNIKRMLQAADG-LPVNIGFLGKGNGSSPDA 205
                         90
                 ....*....|...
gi 766121990 145 LIPLVKAGVRGFK 157
Cdd:cd00375  206 LAEQIEAGACGLK 218
Isoaspartyl-dipeptidase cd01308
Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of ...
12-100 4.99e-03

Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.


Pssm-ID: 238633 [Multi-domain]  Cd Length: 387  Bit Score: 38.91  E-value: 4.99e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 766121990  12 IINGANkpatiVYSTESGKILDVLEGS----VVMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNEPGRTSweGFETG 87
Cdd:cd01308    3 LIKNAE-----VYAPEYLGKKDILIAGgkilAIEDQLNLPGYENVTVVDLHGKILVPGFIDQHVHIIGGGGEG--GPSTR 75
                         90
                 ....*....|....*...
gi 766121990  88 T-----QAAISGGVTTVV 100
Cdd:cd01308   76 TpevtlSDLTTAGVTTVV 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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