|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 684.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 12 LKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASFF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 92 FVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 172 DNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIMLSMMSPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 252 GDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPINQIMFWFMVT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 770593240 332 IVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-365 |
7.07e-121 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 354.87 E-value: 7.07e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 12 LKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASFF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 92 FVCIYLHVGRGLYYGSYMYMH--TWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGF 169
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 170 AVDNPTLNRFFTFH-FILPFIIAAMTIIHLFFLHQSGSNNPLG----MNSNMDKIPFHPYFTFKDSITFIVMTTSLIMLS 244
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 245 MMSPylLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPIN 322
Cdd:COG1290 260 FFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 770593240 323 QIMFWFMVTIVVLLTWIGKRPveEPFIMTGQILTVMYFSYYLL 365
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
1.06e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 260.76 E-value: 1.06e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 10 LLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 90 FFFVCIYLHVGRGLYYGSYMYMH--TWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 770593240 168 GFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
1.14e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 234.97 E-value: 1.14e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 19 LVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASFFFVCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 99 VGRGLYYGSYMYMH--TWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGFAVDNPTL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 770593240 177 NRFFTFHFILPFIIAAMTIIHLFFLHQSG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
240-340 |
2.29e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 61.74 E-value: 2.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 240 LIMLSMMSPYLLGDPdnfipANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTN-FRGIEF 318
Cdd:TIGR01156 51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNkFQNPFR 125
|
90 100
....*....|....*....|..
gi 770593240 319 YPINQIMFWFMvTIVVLltWIG 340
Cdd:TIGR01156 126 RPVATTVFLFG-TVVAL--WLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 684.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 12 LKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASFF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 92 FVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 172 DNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIMLSMMSPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 252 GDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPINQIMFWFMVT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 770593240 332 IVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 622.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 1 MLKPMRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIM 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 81 RTIHANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 161 LVQWIWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 241 IMLSMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 770593240 321 INQIMFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLNIHMSNLWDNLI 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 612.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 1 MLKPMRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIM 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 81 RTIHANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 161 LVQWIWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 241 IMLSMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 770593240 321 INQIMFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLNIHMSNLWDN 375
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEN 375
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 610.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 5 MRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 85 ANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 165 IWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIMLS 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 245 MMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPINQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 770593240 325 MFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLL 365
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 609.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 5 MRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 85 ANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 165 IWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIMLS 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 245 MMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPINQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 770593240 325 MFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLL 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 606.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 1 MLKPMRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIM 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 81 RTIHANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 161 LVQWIWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 241 IMLSMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 770593240 321 INQIMFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLL 365
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 589.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 1 MLKPMRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIM 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 81 RTIHANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 161 LVQWIWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 241 IMLSMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 770593240 321 INQIMFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLNIHMSNLWDNLIK 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 588.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 4 PMRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTI 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 84 HANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 164 WIWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIML 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 244 SMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPINQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 770593240 324 IMFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLNIHMSNLWDN 375
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-377 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 559.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 4 PMRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTI 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 84 HANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 164 WIWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIML 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 244 SMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPINQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 770593240 324 IMFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLNIHMSNLWDNLI 377
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKL 376
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 517.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 1 MLKPMRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIM 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 81 RTIHANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 161 LVQWIWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 241 IMLSMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 770593240 321 INQIMFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLNIHMSNLWDNLIK 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-367 |
4.36e-176 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 494.60 E-value: 4.36e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 4 PMRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTI 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 84 HANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 164 WIWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIML 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 244 SMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPINQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 770593240 324 IMFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLNI 367
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLI 365
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-375 |
6.68e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 484.21 E-value: 6.68e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 1 MLKPMRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIM 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 81 RTIHANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNE 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 161 LVQWIWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 241 IMLSMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 770593240 321 INQIMFWFMVTIVVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLLNIHMSNLWDN 375
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEN 375
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
5-376 |
5.43e-136 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 393.15 E-value: 5.43e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 5 MRLKHLLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIH 84
Cdd:MTH00033 1 MRLRKTGLLEPVNDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 85 ANGASFFFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQW 164
Cdd:MTH00033 81 ANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 165 IWGGFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIMLS 244
Cdd:MTH00033 161 IWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 245 MMS--PYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPIN 322
Cdd:MTH00033 241 IEPriETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTG 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 770593240 323 QIMFWFMVTIVVLLTWIGKRPV-EEPFIMTGQILTVMYFSYYLLNIHMSNLWDNL 376
Cdd:MTH00033 321 KFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNL 375
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-365 |
2.15e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 360.02 E-value: 2.15e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 13 KIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASFFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 93 VCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGFAVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 173 NPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITfIVMTTSLIMLSMMSPYLLG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 253 DPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNktNFRGIeFYPINQIMFWFMVTI 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN--NYTSC-LNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 770593240 333 VVLLTWIGKRPVEEPFIMTGQILTVMYFSYYLL 365
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-365 |
7.07e-121 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 354.87 E-value: 7.07e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 12 LKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASFF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 92 FVCIYLHVGRGLYYGSYMYMH--TWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGF 169
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 170 AVDNPTLNRFFTFH-FILPFIIAAMTIIHLFFLHQSGSNNPLG----MNSNMDKIPFHPYFTFKDSITFIVMTTSLIMLS 244
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 245 MMSPylLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPIN 322
Cdd:COG1290 260 FFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 770593240 323 QIMFWFMVTIVVLLTWIGKRPveEPFIMTGQILTVMYFSYYLL 365
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
1.06e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 260.76 E-value: 1.06e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 10 LLLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 90 FFFVCIYLHVGRGLYYGSYMYMH--TWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 770593240 168 GFAVDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-358 |
5.99e-85 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 261.84 E-value: 5.99e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 11 LLKIVNNSLVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASF 90
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 91 FFVCIYLHVGRGLYYGSYMYMHTWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGFA 170
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 171 VDNPTLNRFFTFHFILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNM-DKIPFHPYFTFKDSITFIVMTTSLIMLSMMSPY 249
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 250 LLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIaLVASIAILMIMPFYNKTNFRGIefypINQIMFWFM 329
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLI 315
|
330 340
....*....|....*....|....*....
gi 770593240 330 VTIVVLLTWIGKRPVEEPFIMTGQILTVM 358
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
1.14e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 234.97 E-value: 1.14e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 19 LVDLPAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASFFFVCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 99 VGRGLYYGSYMYMH--TWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGFAVDNPTL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 770593240 177 NRFFTFHFILPFIIAAMTIIHLFFLHQSG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
2.06e-47 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 158.19 E-value: 2.06e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 208 NPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIMLSMMSPYLLGDPDNFIPANPMVTPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 770593240 288 KLGGVIALVASIAILMIMPFYNKTNFRGiEFYPINQIMFWFMVTIVVLLTWIGKRPVEEPFIMTGQI 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
7.72e-45 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 152.01 E-value: 7.72e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 89 SFFFVCIYLHVGRGLYYGSYMYMH--TWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 167 GGFAVDNPTLNRFFTFHF-ILPFIIAAMTIIHLFFLHQSGSNNPLGMNSNMDKIPFHPYFTFKDSITFIVMTTSLIMLSM 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 770593240 246 MSPYLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
3.91e-42 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 142.62 E-value: 3.91e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 259 PANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTNFRGIEFYPINQIMFWFMVTIVVLLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 770593240 339 IGKRPVEEPFIMTGQILTVMY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
23-210 |
1.37e-35 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 129.83 E-value: 1.37e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 23 PAPINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASFFFVCIYLHVGRG 102
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 103 LYYGSYMYMH--TWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGFAVDNPTLNRFF 180
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|.
gi 770593240 181 TFH-FILPFIIAAMTIIHLFFLHQSGSNNPL 210
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
1.62e-27 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 107.88 E-value: 1.62e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 25 PINISFWWNFGSLLGLCLIIQIAAGLFLAMHYTANIEMAFNSVVHICRDVNNGWIMRTIHANGASFFFVCIYLHVGRGLY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 105 YGSYMYMH--TWMVGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGNELVQWIWGGFAVDNPTLNRFFTF 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 770593240 183 H-FILPFIIAAMTIIHLFFLHQSGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
240-336 |
1.03e-12 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 65.41 E-value: 1.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 240 LIMLSMMSPYLLGDPdnfipANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFY-NKTNFRGIEF 318
Cdd:CHL00058 51 NVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFR 125
|
90
....*....|....*...
gi 770593240 319 YPINQIMFWFMVTIVVLL 336
Cdd:CHL00058 126 RPVATTVFLIGTAVALWL 143
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
241-348 |
1.97e-12 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 64.81 E-value: 1.97e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 241 IMLSMMSPYLLGDPdnfipANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTN-FRGIEFY 319
Cdd:COG5679 53 IGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNkFQNPFRR 127
|
90 100 110
....*....|....*....|....*....|
gi 770593240 320 PINQIMFWFMvTIVVLLTWIGKR-PVEEPF 348
Cdd:COG5679 128 PVATAVFLFG-TLVTLWLGIGAAlPIDKSL 156
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
240-340 |
2.29e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 61.74 E-value: 2.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593240 240 LIMLSMMSPYLLGDPdnfipANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVASIAILMIMPFYNKTN-FRGIEF 318
Cdd:TIGR01156 51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNkFQNPFR 125
|
90 100
....*....|....*....|..
gi 770593240 319 YPINQIMFWFMvTIVVLltWIG 340
Cdd:TIGR01156 126 RPVATTVFLFG-TVVAL--WLG 144
|
|
|