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Conserved domains on  [gi|770593251|gb|AJW76377|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Proscopia sp. HS-2014]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 18-97 1.58e-19

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 75.58  E-value: 1.58e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251  18 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNS 97
Cdd:MTH00162  10 MFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 18-97 1.58e-19

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 75.58  E-value: 1.58e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251  18 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNS 97
Cdd:MTH00162  10 MFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
18-100 5.24e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 36.00  E-value: 5.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251   18 IYLVGVYVFSSsRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYEL--FFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFL 95
Cdd:pfam00420   9 LFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                  ....*
gi 770593251   96 NSLSV 100
Cdd:pfam00420  88 DSLNL 92
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 18-97 1.58e-19

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 75.58  E-value: 1.58e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251  18 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNS 97
Cdd:MTH00162  10 MFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 20-103 1.01e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 53.44  E-value: 1.01e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251  20 LVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSLS 99
Cdd:MTH00188  14 VLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSSLN 93


                 ....
gi 770593251 100 VSLC 103
Cdd:MTH00188  94 LIKC 97
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 26-103 9.45e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 51.00  E-value: 9.45e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251  26 FSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFL--IIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSLSVSLC 103
Cdd:MTH00125  19 LSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpIILLTFSACEAGTGLALLVATTRTHGSDHLKNLNLLQC 98
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 20-103 1.73e-09

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 50.52  E-value: 1.73e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251  20 LVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYL-VMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSL 98
Cdd:MTH00013  13 FISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLmFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLKSL 92


                 ....*
gi 770593251  99 SVSLC 103
Cdd:MTH00013  93 TSNKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 18-103 6.92e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 48.69  E-value: 6.92e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251  18 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNS 97
Cdd:MTH00149  12 GFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDYVSS 91


                 ....*.
gi 770593251  98 LSVSLC 103
Cdd:MTH00149  92 LSSLKF 97
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 30-103 5.74e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 46.50  E-value: 5.74e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 770593251  30 RKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFL--IIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSLSVSLC 103
Cdd:MTH00126  23 RTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAapMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 30-103 2.39e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 44.98  E-value: 2.39e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 770593251  30 RKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFL--IIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSLSVSLC 103
Cdd:MTH00067  23 RTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVATTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 18-103 2.67e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 39.53  E-value: 2.67e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251  18 IYLVGVYVFsssRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFL--IIFLVLSVCEGALGLSVLVSMVRSHGNDFL 95
Cdd:MTH00107  14 ISLLGLLMY---RSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMmpIILLVFAACEAAVGLALLVMVSNTYGTDYV 90


                 ....*...
gi 770593251  96 NSLSVSLC 103
Cdd:MTH00107  91 QNLNLLQC 98
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 30-99 3.69e-04

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 36.43  E-value: 3.69e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 770593251  30 RKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELF--FLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSLS 99
Cdd:MTH00043  23 RLHLLSILLCLELLLISLFLNISIWSLNYGNFSNlsFSLLLLTLSACEASIGLSLMVLLSRNHNSDLVASLN 94
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
18-100 5.24e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 36.00  E-value: 5.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251   18 IYLVGVYVFSSsRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYEL--FFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFL 95
Cdd:pfam00420   9 LFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                  ....*
gi 770593251   96 NSLSV 100
Cdd:pfam00420  88 DSLNL 92
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 18-99 5.41e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 36.08  E-value: 5.41e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593251  18 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDY--ELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFL 95
Cdd:MTH00181   8 AFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSssMLMFGLILLTFSACEAVLGLSLLVATNRTHGSDHL 87


                 ....
gi 770593251  96 NSLS 99
Cdd:MTH00181  88 LKFN 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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