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Conserved domains on  [gi|770593254|gb|AJW76380|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Proscopia sp. HS-2014]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-304 1.29e-107

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 315.56  E-value: 1.29e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   5 FLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFS 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  85 LMVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 165 GFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFF 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 770593254 245 VLFFLGGDYVS-FFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFVG 304
Cdd:MTH00193 241 VLMFLGGDLLSlLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFG 301
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-304 1.29e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 315.56  E-value: 1.29e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   5 FLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFS 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  85 LMVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 165 GFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFF 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 770593254 245 VLFFLGGDYVS-FFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFVG 304
Cdd:MTH00193 241 VLMFLGGDLLSlLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFG 301
NADHdh pfam00146
NADH dehydrogenase;
12-301 8.22e-73

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 226.59  E-value: 8.22e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   12 LFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSLMVSLLI 91
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   92 WLV--FAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIGGFNLG 169
Cdd:pfam00146  82 FAVipFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  170 GLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFFVLFFL 249
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 770593254  250 GG-------DYVSFFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLF 301
Cdd:pfam00146 242 GGwlgpfplPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 2-296 1.18e-66

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 211.53  E-value: 1.18e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   2 WFDFLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFIT 81
Cdd:COG1005    5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  82 YFSLMVSLLIWLV--FAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSL 159
Cdd:COG1005   85 ILAFIPALLAFAVipFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 160 LLMIGGFNLGGLYNYQ-LYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIV 238
Cdd:COG1005  165 VLLAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 770593254 239 FMSVFFVLFFLGGDYVSF-------------FFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSL 296
Cdd:COG1005  245 LVSALATTLFLGGWLGPFpilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-304 1.29e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 315.56  E-value: 1.29e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   5 FLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFS 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  85 LMVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 165 GFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFF 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 770593254 245 VLFFLGGDYVS-FFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFVG 304
Cdd:MTH00193 241 VLMFLGGDLLSlLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFG 301
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-301 6.32e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 273.06  E-value: 6.32e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   6 LMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSL 85
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  86 MVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIGG 165
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 166 FNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFFV 245
Cdd:MTH00225 161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 770593254 246 LFFLGGDYVSFFFF---KVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLF 301
Cdd:MTH00225 241 ILFFGGFFVTIDLFlilKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFM 299
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-303 6.42e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 257.88  E-value: 6.42e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   6 LMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSL 85
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  86 MVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIGG 165
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 166 FNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFFV 245
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 770593254 246 LFFLGGDYVSF------FFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:MTH00143 241 VLFFGGSSVLFllggvvFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFV 304
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-303 1.39e-80

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 247.23  E-value: 1.39e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   7 MFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSLM 86
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  87 VSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIGGF 166
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 167 NLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFFVL 246
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 770593254 247 FFLGGDYVSF--------FFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:MTH00104 241 LFLGAFHNPYmpelyttnFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHI 305
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-304 1.83e-80

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 246.36  E-value: 1.83e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   5 FLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFS 84
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  85 LMVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIG 164
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 165 GFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFF 244
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 770593254 245 VLFFLGGDYVSFFF-FKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFVG 304
Cdd:MTH00218 241 VILFLGTSLTTINLmLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTS 301
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-303 4.69e-79

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 243.37  E-value: 4.69e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   5 FLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFS 84
Cdd:MTH00071   4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  85 LMVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIG 164
Cdd:MTH00071  84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 165 GFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFF 244
Cdd:MTH00071 164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 770593254 245 VLFFLGGDYVSFF--------FFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:MTH00071 244 TILFLGSTYNHLQpelstmnlMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHI 310
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 2-303 4.05e-78

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 240.95  E-value: 4.05e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   2 WFDFLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFIT 81
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  82 YFSLMVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLL 161
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 162 MIGGFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMS 241
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 242 VFFVLFFLGGDYVSF--------FFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:MTH00111 241 TLTTILFLNPSTLNLppelftinLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHT 310
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-296 7.01e-78

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 240.28  E-value: 7.01e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   1 MWFDFLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFI 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  81 TYFSLMVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLL 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 161 LMIGGFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 770593254 241 SVFFVLFFLGGDYVSFF--------FFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSL 296
Cdd:MTH00134 241 NTLSAILFLGASHIPTLpelttinlMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-303 8.41e-77

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 236.95  E-value: 8.41e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   6 LMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSL 85
Cdd:MTH00195   2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  86 MVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIGG 165
Cdd:MTH00195  82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 166 FNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFFV 245
Cdd:MTH00195 162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 770593254 246 LFFLGGDYVSFFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:MTH00195 242 ILFLGGGGTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLA 299
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 6-303 7.68e-74

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 229.86  E-value: 7.68e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   6 LMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSL 85
Cdd:MTH00040   4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  86 MVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIGG 165
Cdd:MTH00040  84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 166 FNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFFV 245
Cdd:MTH00040 164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 770593254 246 LFFLGGD-YVSFFF--------FKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:MTH00040 244 ILFLGGGsPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYL 310
NADHdh pfam00146
NADH dehydrogenase;
12-301 8.22e-73

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 226.59  E-value: 8.22e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   12 LFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSLMVSLLI 91
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   92 WLV--FAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIGGFNLG 169
Cdd:pfam00146  82 FAVipFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  170 GLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFFVLFFL 249
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 770593254  250 GG-------DYVSFFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLF 301
Cdd:pfam00146 242 GGwlgpfplPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-303 9.72e-68

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 213.87  E-value: 9.72e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   8 FILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSLMV 87
Cdd:MTH00010   5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  88 SLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIGGFN 167
Cdd:MTH00010  85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 168 LGGLYNYQlYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFFVLF 247
Cdd:MTH00010 165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 770593254 248 FLGGDYVSFF-----FFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:MTH00010 244 FTSFIPSIFIsdlmlILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISI 304
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-304 1.25e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 214.21  E-value: 1.25e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   6 LMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSL 85
Cdd:MTH00054   2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  86 MVSLLIWLVFAF--YVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMI 163
Cdd:MTH00054  82 TLAFIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 164 GGFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVF 243
Cdd:MTH00054 162 GSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTF 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 770593254 244 FVLFFLGG-----------DYVSFFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFVG 304
Cdd:MTH00054 242 GVILFLGGwlvisgptsyfSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSG 313
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 2-296 1.18e-66

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 211.53  E-value: 1.18e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   2 WFDFLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFIT 81
Cdd:COG1005    5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  82 YFSLMVSLLIWLV--FAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSL 159
Cdd:COG1005   85 ILAFIPALLAFAVipFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 160 LLMIGGFNLGGLYNYQ-LYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIV 238
Cdd:COG1005  165 VLLAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 770593254 239 FMSVFFVLFFLGGDYVSF-------------FFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSL 296
Cdd:COG1005  245 LVSALATTLFLGGWLGPFpilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-301 1.63e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 208.82  E-value: 1.63e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   1 MWFDFLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFI 80
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  81 TYFSLMVSLLIWLVFAFY--VYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLS 158
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 159 LLLMIGGFNLGGLYNYQLYS-WFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLI 237
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNNGiWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 770593254 238 VFMSVFFVLFFLGG---------DYVSFFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLF 301
Cdd:MTH00216 241 ILMSCLTTILFLGGwlspikyfkGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-296 1.93e-62

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 200.80  E-value: 1.93e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   5 FLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFS 84
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  85 LMVSLLIWLV--FAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLM 162
Cdd:PRK06076  89 FIPAFLAWAVipFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 163 IGGFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSV 242
Cdd:PRK06076 169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 770593254 243 FFVLFFLGG-----------DYVSFFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSL 296
Cdd:PRK06076 249 LITTLFLGGwlppfplgggiPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-304 3.49e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 174.82  E-value: 3.49e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   3 FDFLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITY 82
Cdd:MTH00029   4 YSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  83 FSLMVSLLIWLVFAF--YVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLL 160
Cdd:MTH00029  84 ISFTLAILAWAIVTMdqGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVI 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 161 LMIGGFNLGGLYNYQLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFM 240
Cdd:MTH00029 164 LCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILM 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 241 SVFFVLFFLGGDYVSF------------------------FFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSL 296
Cdd:MTH00029 244 SCMMTIFFLGGWLSPLdgiptppeafsifeqiasskssfwFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSL 323


                 ....*...
gi 770593254 297 NYFLFFVG 304
Cdd:MTH00029 324 GLVILTAG 331
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 12-303 1.41e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 163.53  E-value: 1.41e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  12 LFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFSLMVSLLI 91
Cdd:MTH00090   2 LLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  92 WLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIGGFNlggl 171
Cdd:MTH00090  82 WFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFS---- 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 172 ynyqLYSWFVFLAFPLAFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVFFVLFFLGg 251
Cdd:MTH00090 158 ----FVSSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK- 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 770593254 252 dyvsFFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:MTH00090 233 ----FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFV 280
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 5-303 2.75e-38

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 136.98  E-value: 2.75e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   5 FLMFILSLFLLIICVLIsVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPLTSSYFFLLFITYFS 84
Cdd:MTH00058   1 IFGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  85 LMVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIG 164
Cdd:MTH00058  80 VLLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYG 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 165 GFNlggLYNYQLYSWFVFLAFPLAFSCFS-SFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMSVF 243
Cdd:MTH00058 160 SYS---LVDFYYSGWLSVLLFPLIYILWLvCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWL 236

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 244 FVLFFLGGDYVSFFFFkvgLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:MTH00058 237 GSVLFFGGGFVSIMLL---FHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-296 2.30e-18

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 84.23  E-value: 2.30e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   3 FDFLMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPNSVGYIGMFQPFSDAIKLICSEQLVPltSSYFFLLFITY 82
Cdd:CHL00032  24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLP--SRGDIRLFSIG 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  83 FSLMVS--LLIWLV--FAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLS 158
Cdd:CHL00032 102 PSIAVIsiLLSYLVipFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 159 LLLMIGGFN----LGGLYNYQLYSWFVFLAfPLAFSCFS-SFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSE 233
Cdd:CHL00032 182 ISLLSNSLStvdiVEAQSKYGFWGWNLWRQ-PIGFIVFLiSSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVAS 260

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 234 YSLIVFMSVFFVLFFLGG-----DYVSFFFF---------------------KVGLLVFVFIWVRGTLPRYRYDKLMYLA 287
Cdd:CHL00032 261 YLNLLVSSLFVTVLYLGGwnlsiPYIFIPELfeinktggvfgttigifitlaKTYLFLFISITTRWTLPRLRMDQLLNLG 340


                 ....*....
gi 770593254 288 WSSYLPLSL 296
Cdd:CHL00032 341 WKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-303 1.88e-16

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 78.30  E-value: 1.88e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254   6 LMFILSLFLLIICVLISVAFLTLLERSVLGYIQIRKGPnsvgyiGMFQPFSDAIKLICSEQLVPLTSSYFFLLF-ITYFS 84
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRAApYVALA 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254  85 LMVSLLIWLVFAFYVYMISFSYGFLFFFVLSSLGVYTMMISGWSSNSSYSLLGSLRSVAQTISYEVSLALMLLSLLLMIG 164
Cdd:COG0650   75 AMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAG 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593254 165 GFNLGGLYNYQLYSWFVFLAFPL---AFSCFSSFLAETNRTPFDFAEGESELVSGFIVEYGSGGFTLLFLSEYSLIVFMS 241
Cdd:COG0650  155 STSLSDIVAYQAAHGPLLLSPSLllaAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLL 234

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 770593254 242 VFFVLFFLGGD-------YVSFFFFKVGLLVFVFIWVRGTLPRYRYDKLMYLAWSSYLPLSLNYFLFFV 303
Cdd:COG0650  235 SLFVNLFLPWGialtlllALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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