|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
8-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 612.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 8 MIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFI 87
Cdd:MTH00156 3 IINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 88 CMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDN 167
Cdd:MTH00156 83 CIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDN 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 168 PTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEPYLLGD 247
Cdd:MTH00156 163 ATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 248 PENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFWAMIINV 327
Cdd:MTH00156 243 PENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIV 322
|
330 340 350
....*....|....*....|....*....|...
gi 770593295 328 AMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMI 360
Cdd:MTH00156 323 ILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-360 |
4.31e-116 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 342.54 E-value: 4.31e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 12 TLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFICMYM 91
Cdd:COG1290 26 EHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 92 HVGRGLYYGSYmmKN----TWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDN 167
Cdd:COG1290 106 HMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGD 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 168 PTLNRFFMFH-FLMPFMIVSMVMMHIMYLHQTGSNNPLGI----NSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEP 242
Cdd:COG1290 184 ATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 243 ylLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYF 320
Cdd:COG1290 264 --INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALG 341
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 770593295 321 WAMIINVAMLTWIGKcpVEEPYILYSQMMTVVYFSYFIMI 360
Cdd:COG1290 342 VAFIVFFIVLTILGA--NPPIATLLGSINTVTYFAFFLIV 379
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
4-201 |
5.15e-81 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 246.13 E-value: 5.15e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 4 YLTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGAS 83
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 84 LFFICMYMHVGRGLYYGSYM--MKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWG 161
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 770593295 162 GFAVDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSN 201
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-199 |
5.17e-73 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 225.34 E-value: 5.17e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 13 LINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFICMYMH 92
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 93 VGRGLYYG--SYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDNPTL 170
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 770593295 171 NRFFMFHFLMPFMIVSMVMMHIMYLHQTG 199
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
237-291 |
3.47e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.49 E-value: 3.47e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 770593295 237 LMVTEPYLLGDPenfnpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLM 291
Cdd:TIGR01156 54 LAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAA 103
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
8-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 612.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 8 MIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFI 87
Cdd:MTH00156 3 IINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 88 CMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDN 167
Cdd:MTH00156 83 CIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDN 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 168 PTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEPYLLGD 247
Cdd:MTH00156 163 ATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 248 PENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFWAMIINV 327
Cdd:MTH00156 243 PENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIV 322
|
330 340 350
....*....|....*....|....*....|...
gi 770593295 328 AMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMI 360
Cdd:MTH00156 323 ILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
2-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 566.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 2 NNYLTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANG 81
Cdd:MTH00191 4 THPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 82 ASLFFICMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWG 161
Cdd:MTH00191 84 ASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 162 GFAVDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTE 241
Cdd:MTH00191 164 GFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFS 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 242 PYLLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFW 321
Cdd:MTH00191 244 PNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFW 323
|
330 340 350
....*....|....*....|....*....|....*....
gi 770593295 322 AMIINVAMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMI 360
Cdd:MTH00191 324 LWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLL 362
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
2-372 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 565.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 2 NNYLTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANG 81
Cdd:MTH00119 8 SHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 82 ASLFFICMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWG 161
Cdd:MTH00119 88 ASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 162 GFAVDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTE 241
Cdd:MTH00119 168 GFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 242 PYLLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFW 321
Cdd:MTH00119 248 PNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFW 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 770593295 322 AMIINVAMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMINHM-SNMWNKTIK 372
Cdd:MTH00119 328 TLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLlGALENKMLN 379
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
2-373 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 559.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 2 NNYLTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANG 81
Cdd:MTH00145 8 SHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 82 ASLFFICMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWG 161
Cdd:MTH00145 88 ASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 162 GFAVDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTE 241
Cdd:MTH00145 168 GFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFF 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 242 PYLLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFW 321
Cdd:MTH00145 248 PNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFW 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 770593295 322 AMIINVAMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMINHMSNMWNKTIKS 373
Cdd:MTH00145 328 IFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-372 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 548.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 5 LTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASL 84
Cdd:MTH00131 10 LLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 85 FFICMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFA 164
Cdd:MTH00131 90 FFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 165 VDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEPYL 244
Cdd:MTH00131 170 VDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 245 LGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFWAMI 324
Cdd:MTH00131 250 LGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLV 329
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 770593295 325 INVAMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMINHMSN-MWNKTIK 372
Cdd:MTH00131 330 ADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGwLENKALE 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
5-372 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 536.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 5 LTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASL 84
Cdd:MTH00074 11 LLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 85 FFICMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFA 164
Cdd:MTH00074 91 FFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 165 VDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEPYL 244
Cdd:MTH00074 171 VDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 245 LGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFWAMI 324
Cdd:MTH00074 251 LGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLV 330
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 770593295 325 INVAMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMINHMSNMW-NKTIK 372
Cdd:MTH00074 331 ANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLeNKLLK 379
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
2-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 530.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 2 NNYLTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANG 81
Cdd:MTH00100 7 THPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 82 ASLFFICMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWG 161
Cdd:MTH00100 87 ASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 162 GFAVDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTE 241
Cdd:MTH00100 167 GFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFS 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 242 PYLLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFW 321
Cdd:MTH00100 247 PDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFW 326
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 770593295 322 AMIINVAMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMINHMSNM 366
Cdd:MTH00100 327 LLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASL 371
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
2-372 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 522.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 2 NNYLTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANG 81
Cdd:MTH00016 8 THPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 82 ASLFFICMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWG 161
Cdd:MTH00016 88 ASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 162 GFAVDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTE 241
Cdd:MTH00016 168 GFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLW 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 242 PYLLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFW 321
Cdd:MTH00016 248 PNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFW 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 770593295 322 AMIINVAMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMINHMSNMWNKTIK 372
Cdd:MTH00016 328 LLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
8-360 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 512.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 8 MIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFI 87
Cdd:MTH00034 13 ILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 88 CMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDN 167
Cdd:MTH00034 93 CLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDN 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 168 PTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEPYLLGD 247
Cdd:MTH00034 173 ATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALND 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 248 PENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFWAMIINV 327
Cdd:MTH00034 253 PENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATF 332
|
330 340 350
....*....|....*....|....*....|...
gi 770593295 328 AMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMI 360
Cdd:MTH00034 333 FILTWIGSQPVEYPFILLGQVASVLYFSLFLFF 365
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
8-373 |
2.26e-166 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 469.79 E-value: 2.26e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 8 MIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFI 87
Cdd:MTH00224 14 ILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 88 CMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDN 167
Cdd:MTH00224 94 FIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 168 PTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEPYLLGD 247
Cdd:MTH00224 174 ATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 248 PENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFWAMIINV 327
Cdd:MTH00224 254 PENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSW 333
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 770593295 328 AMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMINHMSNMWNKTIKS 373
Cdd:MTH00224 334 AILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLNA 379
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
2-360 |
3.31e-164 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 464.56 E-value: 3.31e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 2 NNYLTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANG 81
Cdd:MTH00022 6 ENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 82 ASLFFICMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWG 161
Cdd:MTH00022 86 ASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 162 GFAVDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTE 241
Cdd:MTH00022 166 GFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFA 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 242 PYLLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFW 321
Cdd:MTH00022 246 PNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFW 325
|
330 340 350
....*....|....*....|....*....|....*....
gi 770593295 322 AMIINVAMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMI 360
Cdd:MTH00022 326 FLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVL 364
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
3-360 |
8.48e-161 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 455.70 E-value: 8.48e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 3 NYLTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGA 82
Cdd:MTH00053 9 NPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 83 SLFFICMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGG 162
Cdd:MTH00053 89 SMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 163 FAVDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEP 242
Cdd:MTH00053 169 FSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 243 YLLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFWA 322
Cdd:MTH00053 249 YSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWF 328
|
330 340 350
....*....|....*....|....*....|....*...
gi 770593295 323 MIINVAMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMI 360
Cdd:MTH00053 329 LVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLIL 366
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
13-367 |
2.47e-132 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 383.52 E-value: 2.47e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 13 LINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFICMYMH 92
Cdd:MTH00033 15 IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 93 VGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDNPTLNR 172
Cdd:MTH00033 95 IGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNR 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 173 FFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMnLMLMLMVTEPY---LLGDPE 249
Cdd:MTH00033 175 FFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILF-GVFVIIGIEPRietLLQDPE 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 250 NFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFWAMIINVAM 329
Cdd:MTH00033 254 NFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFII 333
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 770593295 330 LTWIGKCPV-EEPYILYSQMMTVVYFSYFI----MINHMSNMW 367
Cdd:MTH00033 334 LTWIGSAPAgADPYVLIGRIATIFYFGYFLvlvpLLGYLSNLF 376
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
8-360 |
1.27e-122 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 357.71 E-value: 1.27e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 8 MIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFI 87
Cdd:MTH00086 2 FVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 88 CMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDN 167
Cdd:MTH00086 82 FLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 168 PTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMnLMLMLMVTEPYLLGD 247
Cdd:MTH00086 162 ATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLGD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 248 PENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTfkSLSFYPVSQMYFWAMIINV 327
Cdd:MTH00086 241 PEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYT--SCLNKLNKFLVFSFIVVNV 318
|
330 340 350
....*....|....*....|....*....|...
gi 770593295 328 aMLTWIGKCPVEEPYILYSQMMTVVYFSYFIMI 360
Cdd:MTH00086 319 -ILSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-360 |
4.31e-116 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 342.54 E-value: 4.31e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 12 TLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFICMYM 91
Cdd:COG1290 26 EHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 92 HVGRGLYYGSYmmKN----TWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDN 167
Cdd:COG1290 106 HMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGD 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 168 PTLNRFFMFH-FLMPFMIVSMVMMHIMYLHQTGSNNPLGI----NSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEP 242
Cdd:COG1290 184 ATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 243 ylLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYF 320
Cdd:COG1290 264 --INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALG 341
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 770593295 321 WAMIINVAMLTWIGKcpVEEPYILYSQMMTVVYFSYFIMI 360
Cdd:COG1290 342 VAFIVFFIVLTILGA--NPPIATLLGSINTVTYFAFFLIV 379
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
8-352 |
3.49e-84 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 259.92 E-value: 3.49e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 8 MIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFI 87
Cdd:MTH00046 4 LIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 88 CMYMHVGRGLYYGSYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDN 167
Cdd:MTH00046 84 LLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 168 PTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSNNPLGI-NSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEPYLLG 246
Cdd:MTH00046 164 VTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 247 DPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIaLLMSIMILTCMSmykklTFKSLSFYPVS-QMYFWAMII 325
Cdd:MTH00046 244 DIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVP-----TFNGSSVYSVWrQVNFWLIVS 317
|
330 340
....*....|....*....|....*..
gi 770593295 326 NVAMLTWIGKCPVEEPYILYSQMMTVV 352
Cdd:MTH00046 318 LFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
4-201 |
5.15e-81 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 246.13 E-value: 5.15e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 4 YLTTMIKSTLINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGAS 83
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 84 LFFICMYMHVGRGLYYGSYM--MKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWG 161
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 770593295 162 GFAVDNPTLNRFFMFHFLMPFMIVSMVMMHIMYLHQTGSN 201
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-199 |
5.17e-73 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 225.34 E-value: 5.17e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 13 LINLPTPLNISYWWNMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFICMYMH 92
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 93 VGRGLYYG--SYMMKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDNPTL 170
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 770593295 171 NRFFMFHFLMPFMIVSMVMMHIMYLHQTG 199
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
202-348 |
5.00e-45 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 151.64 E-value: 5.00e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 202 NPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMVTEPYLLGDPENFNPANPLVTPVHIQPEWYFLFAYAILRSIPN 281
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 770593295 282 KLGGVIALLMSIMILTCMSMYKKLTFKSlSFYPVSQMYFWAMIINVAMLTWIGKCPVEEPYILYSQM 348
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
83-248 |
2.43e-39 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 137.76 E-value: 2.43e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 83 SLFFICMYMHVGRGLYYGSYM--MKNTWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVW 160
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRkpRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 161 GGFAVDNPTLNRFFMFHF-LMPFMIVSMVMMHIMYLHQTGSNNPLGINSNNDKIPFHPYFTIKDLITLIIVMNLMLMLMV 239
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 770593295 240 TEPYLLGDP 248
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
253-353 |
6.43e-37 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 129.14 E-value: 6.43e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 253 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLMSIMILTCMSMYKKLTFKSLSFYPVSQMYFWAMIINVAMLTW 332
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 770593295 333 IGKCPVEEPYILYSQMMTVVY 353
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
33-204 |
4.57e-34 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 125.59 E-value: 4.57e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 33 GLTL---MIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFICMYMHVGRGLYYGSYMMKN--T 107
Cdd:PRK03735 46 GLTFfcfVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelN 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 108 WIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDNPTLNRFFMFH-FLMPFMIVS 186
Cdd:PRK03735 126 WVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAV 205
|
170
....*....|....*...
gi 770593295 187 MVMMHIMYLHQTGSNNPL 204
Cdd:PRK03735 206 LMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
16-204 |
2.09e-26 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 104.80 E-value: 2.09e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 16 LPTPLNISYWwnMGSLLGLTLMIQISTGMFLTMHYTPNIDMAFDSVIHICREVNNGWIMRIMHANGASLFFICMYMHVGR 95
Cdd:CHL00070 26 VPPHVNIFYC--LGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593295 96 GLYYGSYMMKN--TWIMGTLIMLTVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGNELVQWVWGGFAVDNPTLNRF 173
Cdd:CHL00070 104 VYLTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRF 183
|
170 180 190
....*....|....*....|....*....|..
gi 770593295 174 FMFH-FLMPFMIVSMVMMHIMYLHQTGSNNPL 204
Cdd:CHL00070 184 YSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
237-292 |
6.71e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 57.32 E-value: 6.71e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 770593295 237 LMVTEPYLLGDPenfnpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGViaLLMS 292
Cdd:CHL00058 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGV--LLMA 102
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
233-289 |
6.86e-09 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 54.41 E-value: 6.86e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 770593295 233 LMLMLMVTEPYLLGDPenfnpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIAL 289
Cdd:COG5679 51 LCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMM 102
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
237-291 |
3.47e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.49 E-value: 3.47e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 770593295 237 LMVTEPYLLGDPenfnpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALLM 291
Cdd:TIGR01156 54 LAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAA 103
|
|
| |
