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Conserved domains on  [gi|770593310|gb|AJW76432|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Mirhipipteryx andensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-306 6.33e-142

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 402.23  E-value: 6.33e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQ 160
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 161 SLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLM 240
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 770593310 241 VVLFLGCDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSLII 306
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-306 6.33e-142

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 402.23  E-value: 6.33e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQ 160
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 161 SLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLM 240
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 770593310 241 VVLFLGCDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSLII 306
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
9-300 1.46e-102

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 302.08  E-value: 1.46e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310    9 LLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLALLIW 88
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   89 SVFPYWSYM--CSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSLSLMS 166
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  167 LIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVVLFLG 246
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  247 ------CDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFG 300
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-306 6.54e-97

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 288.95  E-value: 6.54e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:COG1005    8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMC--SFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVV 158
Cdd:COG1005   88 FIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 159 VQSLSLMSLIEHQE-FIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMS 237
Cdd:COG1005  168 AGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 238 MLMVVLFLG--------CDTYS----FFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSLI 305
Cdd:COG1005  248 ALATTLFLGgwlgpfpiLPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLL 327


                 .
gi 770593310 306 I 306
Cdd:COG1005  328 F 328
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
8-304 7.19e-51

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 171.04  E-value: 7.19e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   8 GLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLALLI 87
Cdd:NF040610  16 GLALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLM 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  88 WSVFPY-------WSY---MCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLV 157
Cdd:NF040610  96 LVAIPFgaviingVEYplvVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAI 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 158 VVQSLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMS 237
Cdd:NF040610 176 MAGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGS 255

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 238 MLMVVLFLGCDTYSFF--------------FFLSMSLLAFSF-IWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGL 302
Cdd:NF040610 256 FLVVLLFLGGWNLPGFvtdipvlgiilptlFFLMKVAIVLMFiIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIAL 335


                 ..
gi 770593310 303 SL 304
Cdd:NF040610 336 GL 337
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-306 6.33e-142

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 402.23  E-value: 6.33e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQ 160
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 161 SLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLM 240
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 770593310 241 VVLFLGCDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSLII 306
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 2-303 6.00e-128

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 366.89  E-value: 6.00e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   2 LLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGL 81
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  82 LLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQS 161
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 162 LSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMV 241
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 770593310 242 VLFLG-----CDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLS 303
Cdd:MTH00143 241 VLFFGgssvlFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 5-304 4.16e-127

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 364.74  E-value: 4.16e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   5 FVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLA 84
Cdd:MTH00225   4 LLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILS 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  85 LLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSLSL 164
Cdd:MTH00225  84 LILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 165 MSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVVLF 244
Cdd:MTH00225 164 FDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILF 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 770593310 245 LGC--DTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSL 304
Cdd:MTH00225 244 FGGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-299 4.49e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 324.65  E-value: 4.49e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:MTH00071   4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQ 160
Cdd:MTH00071  84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 161 SLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLM 240
Cdd:MTH00071 164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 770593310 241 VVLFLGCDTYSFFFFLS-------MSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFF 299
Cdd:MTH00071 244 TILFLGSTYNHLQPELStmnlmikASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFH 309
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-306 5.31e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 321.47  E-value: 5.31e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQ 160
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 161 SLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLM 240
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 770593310 241 VVLFLGCDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSLII 306
Cdd:MTH00218 241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-295 5.41e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 321.84  E-value: 5.41e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQ 160
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 161 SLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLM 240
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 770593310 241 VVLFLGCDTYS-----FFFFLSMS--LLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNM 295
Cdd:MTH00111 244 TILFLNPSTLNlppelFTINLMTKtlLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLAL 305
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 3-306 1.07e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 315.80  E-value: 1.07e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   3 LHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLL 82
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  83 LALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSL 162
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 163 SLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVV 242
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 770593310 243 LFLGC-------DTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSLII 306
Cdd:MTH00104 241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-298 1.02e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 312.83  E-value: 1.02e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQ 160
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 161 SLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLM 240
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 770593310 241 VVLFLGcDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIF 298
Cdd:MTH00195 241 TILFLG-GGGTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIP 297
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-297 1.25e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 308.46  E-value: 1.25e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:MTH00134   5 LITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQ 160
Cdd:MTH00134  85 LTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTG 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 161 SLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLM 240
Cdd:MTH00134 165 GFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 770593310 241 VVLFLGCDTYSFF-------FFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMII 297
Cdd:MTH00134 245 AILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVI 308
NADHdh pfam00146
NADH dehydrogenase;
9-300 1.46e-102

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 302.08  E-value: 1.46e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310    9 LLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLALLIW 88
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   89 SVFPYWSYM--CSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSLSLMS 166
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  167 LIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVVLFLG 246
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  247 ------CDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFG 300
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 2-306 3.46e-102

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 301.89  E-value: 3.46e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   2 LLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGL 81
Cdd:MTH00040   4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  82 LLALLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQS 161
Cdd:MTH00040  84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 162 LSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMV 241
Cdd:MTH00040 164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 770593310 242 VLFLGCDTYSFFFF--------LSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSLII 306
Cdd:MTH00040 244 ILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 5-306 2.27e-100

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 297.08  E-value: 2.27e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   5 FVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLA 84
Cdd:MTH00010   6 FISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  85 LLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSLSL 164
Cdd:MTH00010  86 LLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSF 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 165 MSLIEHQEFiWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVVLF 244
Cdd:MTH00010 166 SKIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 770593310 245 LGCDTYSFFFFLSMSL----LAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSLII 306
Cdd:MTH00010 245 TSFIPSIFISDLMLILktvfLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-306 6.54e-97

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 288.95  E-value: 6.54e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:COG1005    8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWSYMC--SFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVV 158
Cdd:COG1005   88 FIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 159 VQSLSLMSLIEHQE-FIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMS 237
Cdd:COG1005  168 AGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 238 MLMVVLFLG--------CDTYS----FFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGLSLI 305
Cdd:COG1005  248 ALATTLFLGgwlgpfpiLPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLL 327


                 .
gi 770593310 306 I 306
Cdd:COG1005  328 F 328
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-302 4.80e-92

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 276.22  E-value: 4.80e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   1 MLLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMG 80
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  81 LLLALLIWSVFPYWS--YMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVV 158
Cdd:MTH00054  81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 159 VQSLSLMSLIEHQEFIWFIF-LFPGLfMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMS 237
Cdd:MTH00054 161 VGSLNLTEIVLAQKNIWFIFpLFPAA-IMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMS 239

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 770593310 238 MLMVVLFLG----------CDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGL 302
Cdd:MTH00054 240 TFGVILFLGgwlvisgptsYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
2-302 3.94e-91

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 273.99  E-value: 3.94e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   2 LLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGL 81
Cdd:PRK06076  10 LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAF 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  82 LLALLIWSVFPYWSY--MCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVV 159
Cdd:PRK06076  90 IPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLA 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 160 QSLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSML 239
Cdd:PRK06076 170 GSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSAL 249

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 770593310 240 MVVLFLG----------CDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGL 302
Cdd:PRK06076 250 ITTLFLGgwlppfplggGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 9-302 6.55e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 273.53  E-value: 6.55e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   9 LLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLALLIW 88
Cdd:MTH00216  13 LIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVW 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  89 SVFPYWS--YMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSLSLMS 166
Cdd:MTH00216  93 GVIPYERgvLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITE 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 167 LIEHQ-EFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVVLFL 245
Cdd:MTH00216 173 IVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFL 252

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 770593310 246 G--------CDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGL 302
Cdd:MTH00216 253 GgwlspikyFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 9-302 3.02e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 229.13  E-value: 3.02e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   9 LLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLALLIW 88
Cdd:MTH00029  14 LIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAW 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  89 SV--FPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSLSLMS 166
Cdd:MTH00029  94 AIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISE 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 167 LIEHQEFIWFIF-LFPGLFMMWFAScLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVVLFL 245
Cdd:MTH00029 174 IVISQRSVWLIIpLFPAAIMFMVAS-LAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFL 252

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 246 G-----------------------CDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGL 302
Cdd:MTH00029 253 GgwlspldgiptppeafsifeqiaSSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 9-299 7.55e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 207.83  E-value: 7.55e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   9 LLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLALLIW 88
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  89 SVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSLSLMSLI 168
Cdd:MTH00090  83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 169 ehqEFIWFIFLFPGLFMMwfascLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVVLFLgcD 248
Cdd:MTH00090 163 ---SLSLFVIYLPFLIMI-----IAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF--K 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 770593310 249 TYSFFFFLSMSLLAFSfiwaRGTLPRYRYDKLMSLAWSSFLPVALNMIIFF 299
Cdd:MTH00090 233 FSFLMLFLIFSLLIFI----RSSYPRFRYDMMMSMFWFKFLPLSLIFLGFF 279
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 5-299 4.43e-53

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 175.50  E-value: 4.43e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   5 FVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLA 84
Cdd:MTH00058   4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  85 LLIWSVFPYWSYMCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSLSL 164
Cdd:MTH00058  84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 165 MSLIEhqEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVVLF 244
Cdd:MTH00058 164 VDFYY--SGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLF 241

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 770593310 245 LGCDTYSFFFFLSMsllaFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFF 299
Cdd:MTH00058 242 FGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
8-304 7.19e-51

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 171.04  E-value: 7.19e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   8 GLLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLALLI 87
Cdd:NF040610  16 GLALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLM 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  88 WSVFPY-------WSY---MCSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLV 157
Cdd:NF040610  96 LVAIPFgaviingVEYplvVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAI 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 158 VVQSLSLMSLIEHQEFIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMS 237
Cdd:NF040610 176 MAGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGS 255

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 238 MLMVVLFLGCDTYSFF--------------FFLSMSLLAFSF-IWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFFGGL 302
Cdd:NF040610 256 FLVVLLFLGGWNLPGFvtdipvlgiilptlFFLMKVAIVLMFiIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIAL 335


                 ..
gi 770593310 303 SL 304
Cdd:NF040610 336 GL 337
ndhA CHL00032
NADH dehydrogenase subunit 1
 9-293 2.96e-42

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 148.95  E-value: 2.96e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   9 LLMVICVLVSIAFLTLLERKVLGYIQIRKGPNKVGYMGLIQPFSDAIKLFTKEQTMPTVSNYYLYLISPVMGLLLALLIW 88
Cdd:CHL00032  34 LTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSY 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  89 SVFPYWSYM--CSFNYGIMFFLCVSSMGVYSIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLLVVVQSLSLMS 166
Cdd:CHL00032 114 LVIPFGYHLvlADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVD 193

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 167 LIEHQE----FIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILFMSMLMVV 242
Cdd:CHL00032 194 IVEAQSkygfWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTV 273

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 770593310 243 LFLGCDTYS--FFFFLSMS-----------------------LLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVAL 293
Cdd:CHL00032 274 LYLGGWNLSipYIFIPELFeinktggvfgttigifitlaktyLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
2-299 8.23e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 103.72  E-value: 8.23e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310   2 LLHFVGGLLMVICVLVSIAFLTLLERKVLGYIQIRKGPnkvgymGLIQPFSDAIKLFTKEQTMPTVSNYyLYLISPVMGL 81
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310  82 LLALLIWSVFPYWSYMCSFNY-----GIMFFLCVSSMGvysIMIAGWASNSNYALLGSLRAVAQTISYEVSMALLVFSLL 156
Cdd:COG0650   74 AAMLLAALLVPVLTTGPPLSFsgdliVLVYLLALARFF---LALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALA 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 770593310 157 VVVQSLSLMSLIEHQE---FIWFIFLFPGLFMMWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMI 233
Cdd:COG0650  151 LLAGSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKL 230

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 770593310 234 LFMSMLMVVLFLG------CDTYSFFFFLSMSLLAFSFIWARGTLPRYRYDKLMSLAWSSFLPVALNMIIFF 299
Cdd:COG0650  231 FVLLSLFVNLFLPwgialtLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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