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Conserved domains on  [gi|823078601|gb|AKI26712|]
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NADH dehydrogenase subunit 5, partial (mitochondrion) [Eumigus monticolus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND5 super family cl33362
NADH dehydrogenase subunit 5; Provisional
 1-100 7.57e-30

NADH dehydrogenase subunit 5; Provisional


The actual alignment was detected with superfamily member MTH00165:

Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 110.62  E-value: 7.57e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00165 312 AGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSY 391

                         90       100
                 ....*....|....*....|
gi 823078601  81 SFRFFYYSMYGDNNFYSSFS 100
Cdd:MTH00165 392 SFRLIYYSMSGDFNLKSLNN 411
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-100 7.57e-30

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 110.62  E-value: 7.57e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00165 312 AGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSY 391

                         90       100
                 ....*....|....*....|
gi 823078601  81 SFRFFYYSMYGDNNFYSSFS 100
Cdd:MTH00165 392 SFRLIYYSMSGDFNLKSLNN 411
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-86 8.76e-13

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 62.48  E-value: 8.76e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDcQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILE-LVSLSWMNFFNFFLFFFSTGWTAS 79
Cdd:COG1009  344 AGSVIHATGT-RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAF 422


                 ....*..
gi 823078601  80 YSFRFFY 86
Cdd:COG1009  423 YSFRLFF 429
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 1-55 1.22e-08

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 50.39  E-value: 1.22e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 823078601    1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILE 55
Cdd:pfam00361 219 AGSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-100 7.57e-30

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 110.62  E-value: 7.57e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00165 312 AGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSY 391

                         90       100
                 ....*....|....*....|
gi 823078601  81 SFRFFYYSMYGDNNFYSSFS 100
Cdd:MTH00165 392 SFRLIYYSMSGDFNLKSLNN 411
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
 1-100 5.78e-21

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 85.66  E-value: 5.78e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00151 309 AGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALY 388

                         90       100
                 ....*....|....*....|..
gi 823078601  81 SFRFFYYSMYGDN--NFYSSFS 100
Cdd:MTH00151 389 SARLSFCLVWGSMksSSLSSKS 410
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
 1-97 1.12e-19

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 82.00  E-value: 1.12e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00209 308 AGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAY 387

                         90
                 ....*....|....*..
gi 823078601  81 SFRFFYYSMYGDNNFYS 97
Cdd:MTH00209 388 SMRLSYFSLWGPNSSKS 404
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
 1-91 2.40e-18

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 78.28  E-value: 2.40e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00004 342 SGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAY 421

                         90
                 ....*....|.
gi 823078601  81 SFRFFYYSMYG 91
Cdd:MTH00004 422 SLRMILLVQTG 432
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
 2-95 5.27e-18

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 77.32  E-value: 5.27e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   2 GSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASYS 81
Cdd:MTH00208 370 GSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYS 449

                         90
                 ....*....|....
gi 823078601  82 FRFFYYSMYGDNNF 95
Cdd:MTH00208 450 FRIIFFCFLNNPSF 463
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
 1-94 1.82e-17

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 75.57  E-value: 1.82e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00207 312 AGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAY 391

                         90
                 ....*....|....
gi 823078601  81 SFRFFYYSMYGDNN 94
Cdd:MTH00207 392 STRFTLAVLWSPNS 405
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
 1-89 2.44e-17

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 75.25  E-value: 2.44e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00137 348 SGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVY 427

                         90
                 ....*....|
gi 823078601  81 SFR-FFYYSM 89
Cdd:MTH00137 428 SLRvVFFVSM 437
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
 2-95 3.51e-17

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 74.99  E-value: 3.51e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   2 GSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASYS 81
Cdd:MTH00211 338 GSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYS 417

                         90
                 ....*....|....
gi 823078601  82 FRFFYYSMYGDNNF 95
Cdd:MTH00211 418 FRLIFLSLGGYPRF 431
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
 1-91 4.48e-17

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 74.50  E-value: 4.48e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00108 343 SGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAY 422

                         90
                 ....*....|.
gi 823078601  81 SFRFFYYSMYG 91
Cdd:MTH00108 423 STRIIFFALLG 433
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
 1-88 4.72e-16

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 71.48  E-value: 4.72e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00066 340 SGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVY 419


                 ....*...
gi 823078601  81 SFRFFYYS 88
Cdd:MTH00066 420 SFRIIYFS 427
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
 1-94 2.89e-15

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 69.34  E-value: 2.89e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00020 343 AGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFY 422

                         90
                 ....*....|....
gi 823078601  81 SFRFFYYSMYGDNN 94
Cdd:MTH00020 423 SIRLIYLTFLSNTN 436
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
 1-94 2.17e-14

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 66.96  E-value: 2.17e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:MTH00210 344 AGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFY 423

                         90
                 ....*....|....
gi 823078601  81 SFRFFYYSMYGDNN 94
Cdd:MTH00210 424 SIRLIYLTFITNTN 437
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
 1-91 1.99e-13

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 64.02  E-value: 1.99e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILElVSLSWMNFFNFFLFFFSTGWTASY 80
Cdd:PRK06590 350 AGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFY 428

                         90
                 ....*....|.
gi 823078601  81 SFRFFYYSMYG 91
Cdd:PRK06590 429 SFRLIFLVFHG 439
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-86 8.76e-13

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 62.48  E-value: 8.76e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNLKDcQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILE-LVSLSWMNFFNFFLFFFSTGWTAS 79
Cdd:COG1009  344 AGSVIHATGT-RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAF 422


                 ....*..
gi 823078601  80 YSFRFFY 86
Cdd:COG1009  423 YSFRLFF 429
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
2-92 2.16e-10

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 55.41  E-value: 2.16e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   2 GSMIHNLKD--------CQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILELV----SLSWMnffnffL 69
Cdd:PRK07376 361 GSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAfeanPALWF------V 434

                         90       100
                 ....*....|....*....|...
gi 823078601  70 FFFSTGWTASYSFRFFYYSMYGD 92
Cdd:PRK07376 435 GFLTAGMTAFYMFRMYFLTFEGE 457
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
 1-56 8.85e-09

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 51.11  E-value: 8.85e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 823078601   1 AGSMIHNLK-DCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILEL 56
Cdd:MTH00032 359 AGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 1-55 1.22e-08

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 50.39  E-value: 1.22e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 823078601    1 AGSMIHNLKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILE 55
Cdd:pfam00361 219 AGSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
ndhF CHL00025
NADH dehydrogenase subunit 5
 1-97 9.52e-08

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 47.96  E-value: 9.52e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823078601   1 AGSMIHNL--------KDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILelvSLSWMNFFNFFLFFF 72
Cdd:CHL00025 360 SGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL---NDSWLYSPIFAIIAW 436

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 823078601  73 ST-GWTASYSFR-------------FFYYSMYGDNNFYS 97
Cdd:CHL00025 437 STaGLTAFYMFRiylltfeghlrvhFQNYSGKKNSSFYS 475
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
 1-55 7.76e-05

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 39.75  E-value: 7.76e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 823078601   1 AGSMIHNLKDcQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSKDLILE 55
Cdd:COG0651  344 AGAIERATGT-RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ 397
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
 1-61 3.30e-03

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 35.27  E-value: 3.30e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 823078601   1 AGSMIHNlKDCQDIRFMGSIVYFMPLTSVCFNVSMFSLCGILFLAGFYSkdlILELVSLSW 61
Cdd:PRK07390 353 VGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLW 409
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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