|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-571 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 644.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 1 MCSLSFVVLFMFSTFTFLISIYYLMFDYSVFIEWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNES 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 81 NINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAWMLNFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 161 SWNYINYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNY 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 241 GWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDS 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 321 QDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 401 INNFYSSYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLSGLTLFVVVLGFYFGYLISDFNYFCGLF 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 481 SLNFMSFVSFVVSMWFMPFLSTSYISYVPLSFGYSLLKSFDYGRGEMLGGQGLYSFFMYLIDYIQSLYDSNFKVYLLPFI 560
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
570
....*....|.
gi 887513769 561 FWMFILFMFFY 571
Cdd:MTH00165 563 LWMIILLLLFL 573
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
6-570 |
8.16e-161 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 470.67 E-value: 8.16e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 6 FVVLFMFSTFTFLISIYYLMFDYSVFIEWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRF 85
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 86 VILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAWMLNFGSWNYi 165
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNI- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 166 nyYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LTYNYGWML 244
Cdd:MTH00209 165 --FYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLfSSPFFSMSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 245 MLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIR 324
Cdd:MTH00209 243 LLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIR 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 325 FMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGINNF 404
Cdd:MTH00209 323 MVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSS 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 405 YSSYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLSGLTLFVVVLGFYFGYLISDFNYfcglFSLNF 484
Cdd:MTH00209 403 KSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF----FLIKG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 485 MSFVSFVVSMWFMPFLSTSYISYVPLSFGYSLLKSFDYGRGEMLGGQGLYSFFMYLIDYIQSLYDSNFKVYLLPFIFWMF 564
Cdd:MTH00209 479 YKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILL 558
|
....*.
gi 887513769 565 ILFMFF 570
Cdd:MTH00209 559 GVILFM 564
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
1.36e-160 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 470.09 E-value: 1.36e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 1 MCSLSFVVLFMFSTFTFLISIYYLMFDYSVFIEWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNES 80
Cdd:MTH00151 3 MSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 81 NINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAWMLNFG 160
Cdd:MTH00151 83 FLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 161 SWNYinyyYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LTYN 239
Cdd:MTH00151 163 HWSI----LSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLsSSSG 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 240 YGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSD 319
Cdd:MTH00151 239 FSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 320 SQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSML 399
Cdd:MTH00151 319 TQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVW 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 400 GINNFYSSYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLSGLTLFVVVLGFYFGYLISDFNYfcgl 479
Cdd:MTH00151 399 GSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGF---- 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 480 FSLNFMSFVSFVVSMWFMPFLSTSYISYVPLSFGYSLLKSFDYGRGEMLGGQGLYSFFMYLIDYIQSLYDSNFKVYLLPF 559
Cdd:MTH00151 475 SSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLI 554
|
570
....*....|.
gi 887513769 560 IFWMFILFMFF 570
Cdd:MTH00151 555 LLLVLFLVVIS 565
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
3-569 |
3.30e-156 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 459.23 E-value: 3.30e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 3 SLSFVVLFMFSTFTFLISIYYLMFDYSVFIEWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNI 82
Cdd:MTH00207 8 SIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 83 NRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAWMLNFGSW 162
Cdd:MTH00207 88 SRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 163 NYINYYyfifDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LTYNYG 241
Cdd:MTH00207 168 SITNMW----QTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLsSTYWFN 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 242 WMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQ 321
Cdd:MTH00207 244 PALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQ 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 322 DIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGI 401
Cdd:MTH00207 324 DLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSP 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 402 NNFYSSYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLSGLTLFVVVLGFYFGYLISDFNYFCGLFS 481
Cdd:MTH00207 404 NSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLL 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 482 LNFMSFVSFVVSMWFMPFLSTSYISYVPLSFGYSLLKSFDYGRGEMLGGQGLYSFFMYLIDYIQSLYDSNFKVYL-LPFI 560
Cdd:MTH00207 484 INNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLmMSFV 563
|
....*....
gi 887513769 561 FWMFILFMF 569
Cdd:MTH00207 564 LLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
3-570 |
5.26e-110 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 341.16 E-value: 5.26e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 3 SLSFVVLFMFSTFTFLISIYYLMFDY--SVFIEWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNES 80
Cdd:MTH00211 28 KLHIKKAVKLSFFISLIPLLIFLDQGleTILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 81 NINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTAL-SNRIGDVCILISIAWML-N 158
Cdd:MTH00211 108 NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 159 FGSWNYINYYYFifdSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTY 238
Cdd:MTH00211 188 LNSWEISQLFIL---NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNN 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 239 NY-GWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNL 317
Cdd:MTH00211 265 QLiLGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 318 SDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYS 397
Cdd:MTH00211 345 NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLS 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 398 MLGINNFYSSYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIFPIPYMIV-LPWYLSGLTLFVVVLGFYFG-YLISDFNY 475
Cdd:MTH00211 425 LGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLGlELVNLTHK 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 476 FCGLFSLNFMSFVSFvvsmwFMPFLSTSYISYVPLSFGYSLLKSFDYGRGEMLGGQGLYSFFMYLIDYIQSLYDSNFKVY 555
Cdd:MTH00211 505 QLKTSTLSFSNMLGY-----YPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSY 579
|
570
....*....|....*
gi 887513769 556 LLPFIFWMFILFMFF 570
Cdd:MTH00211 580 LALLLLSLLLILLLF 594
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
10-411 |
7.60e-95 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 301.70 E-value: 7.60e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 10 FMFSTFTFLISIYYLMfdYSVFIEWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILV 89
Cdd:MTH00004 44 FLISLIPLTLFLNSGT--ESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 90 LMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVCILISIAWM-LNFGSWNYINy 167
Cdd:MTH00004 122 LIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEIQQ- 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 168 yyfIFDSFEMKIITML-IIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNYGWMLML 246
Cdd:MTH00004 201 ---LFSPTQTPTLPLLgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 247 I-GCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRF 325
Cdd:MTH00004 278 ClGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRK 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 326 MGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGINNFY 405
Cdd:MTH00004 358 MGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTP 437
|
....*.
gi 887513769 406 SSYFFN 411
Cdd:MTH00004 438 PTTPIN 443
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-470 |
3.32e-92 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 295.14 E-value: 3.32e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 6 FVVLFMFSTFTFLISIYYLMFDYSVFIE-WEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINR 84
Cdd:COG1009 33 LAALAPLAAFVLSLLLFPAVLGGEVVVElYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLAR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 85 FVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVCILISIAWMLN-FGSW 162
Cdd:COG1009 113 FFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 163 NY---INYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LTY 238
Cdd:COG1009 193 NFselLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFaLSP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 239 NYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLS 318
Cdd:COG1009 273 VWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 319 dSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILE-VVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYS 397
Cdd:COG1009 353 -TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLV 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 398 MLGINNFYSSYFFNDKSYFISFGMIGLLFVAVFGGSFLSWL---------IFPIPYMIVLPWYLSGLTLFVVVLGFYFGY 468
Cdd:COG1009 432 FFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGY 511
|
..
gi 887513769 469 LI 470
Cdd:COG1009 512 LL 513
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
3-572 |
1.64e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 291.49 E-value: 1.64e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 3 SLSFVVLFMFSTFTFLISIYYLMFDYSVFI----EWeiFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYN 78
Cdd:MTH00208 56 NFSISLLKTLAFLSLINLLIWILLGCPNINislsNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 79 ESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVCILISIAW-M 156
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 157 LNFGSWNYINYYYFI-FDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML 235
Cdd:MTH00208 214 INFNSWNLNEILSLNnSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLI 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 236 LTYNYGWMLMLI-GCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMI 314
Cdd:MTH00208 294 SNSPWFLSLCLIlGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSII 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 315 HNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLF 394
Cdd:MTH00208 374 HSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRII 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 395 YYSMLGINNFYSSYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIFPIPyMIVLPWYLSGLTLFVVVLGFYFGYLISdFN 474
Cdd:MTH00208 454 FFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFL-LS 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 475 YFCGLFSLNFMSFVSFvvsMWFmpFLSTSYISYVPLSFGYSL---LKSFDYGRGEMLGGQGLYSFFMYLIDYIQSLYDSN 551
Cdd:MTH00208 532 LSSNPINSNFFSFLSN---QWF--FVNISHSIIISFSFFTSLfgsTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGY 606
|
570 580
....*....|....*....|.
gi 887513769 552 FKVYLLPFIFWMFILFMFFYL 572
Cdd:MTH00208 607 IKQYLLSSTLLFLLILTLSLI 627
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
10-570 |
2.00e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 279.87 E-value: 2.00e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 10 FMFSTFTFLISIYYLMfdYSVFIEWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILV 89
Cdd:MTH00066 42 FFISLIPLMIFINQGL--ESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 90 LMFIFSMVLLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVCILISIAW-MLNFGSWNYIny 167
Cdd:MTH00066 120 LIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQ-- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 168 yyFIFDSFEMKIITML-IIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNYGWMLML 246
Cdd:MTH00066 198 --QIFLLNDNSTLPLLgLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICL 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 247 -IGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRF 325
Cdd:MTH00066 276 cLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRK 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 326 MGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGINNFY 405
Cdd:MTH00066 356 MGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSL 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 406 SSYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIFPIPYMIV-LPWYLSGLTLFVVVLGFYFGYLISDFNYFCGLFSLNF 484
Cdd:MTH00066 436 PLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILtMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMH 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 485 msfvSFVVSMWFMPFLSTSYISYVPLSFGYSLLKS-FDYGRGEMLGGQGLYSFFMYLIDYIQSLYDSNFKVYLLPFIFWM 563
Cdd:MTH00066 516 ----SFSNLLAFFPTIIHRLSPKTNLNSGQNIATHlTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITL 591
|
....*..
gi 887513769 564 FILFMFF 570
Cdd:MTH00066 592 LLMLILL 598
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
15-464 |
3.43e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 279.05 E-value: 3.43e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 15 FTFLIS-IYYLMFDYS----VFIEWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILV 89
Cdd:MTH00108 42 YAFIISlIPTMMFIHSgqemIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 90 LMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA-LSNRIGDVCILISIAW-MLNFGSWNYINY 167
Cdd:MTH00108 122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDLQQI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 168 yyFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNYGWMLML- 246
Cdd:MTH00108 202 --FMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLc 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 247 IGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFM 326
Cdd:MTH00108 280 LGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKM 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 327 GSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGINNFYS 406
Cdd:MTH00108 360 GGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPP 439
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 407 SYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIFP--IPYMiVLPWYLSGLTLFVVVLGF 464
Cdd:MTH00108 440 LITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIPQM-TMPLYLKLTALAVTILGF 498
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
34-470 |
1.55e-82 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 269.92 E-value: 1.55e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 34 WEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWD 113
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 114 GLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVCILISIAWMLN-FGSWNYINYYYFIFDSFE--MKIITMLIIIASM 189
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFQEVFALAPGAFFsaLTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 190 TSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKV 268
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLfELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 269 IALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLC 348
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 349 GMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGINNFYSSYFFNDKSYFISFGMIGLLFVA 428
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 887513769 429 VFGGSFLSWLIFPIPYMIV-----------LPWYLSGLTLFVVVLGFYFGYLI 470
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAYLL 517
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
46-398 |
1.16e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 262.08 E-value: 1.16e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 46 MTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:MTH00137 82 ISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGW 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 126 YQNVKSYNAGMLTA-LSNRIGDVCILISIAWML-NFGSWNyINYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPA 203
Cdd:MTH00137 162 WYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPS 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNygwmLMLIGCM------TMFMA--GLGANfefDLSKVIALSTLS 275
Cdd:MTH00137 241 AMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQ----TALTTCLclgaltTLFTAtcALTQN---DIKKIVAFSTSS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 276 QLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVG 355
Cdd:MTH00137 314 QLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAG 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 887513769 356 FYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRL-FYYSM 398
Cdd:MTH00137 394 FFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-470 |
3.59e-79 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 261.25 E-value: 3.59e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 46 MTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 126 YQNVKSYNAGMLTA-LSNRIGDVCILISIAWML-NFGSWNY----INYYYFIFDSFEM-KIITMLIIIASMTSSAQIPFS 198
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYdevfAAAPQFFGLGWSAlTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQL 277
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLfELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 278 GLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFY 357
Cdd:PRK06590 318 GYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFF 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 358 SKDLILEVVcLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGiNNFYSSYFFNDKSYFISFGMIGLLFVAVFGG----- 432
Cdd:PRK06590 398 SKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFRLIFLVFHG-KEKEKIHHPHESPAVMTLPLIVLAVLSVFAGalivp 475
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 887513769 433 SFLSWLIFP-----IPYMIVLPWYLSGLTLFVVVLGFYFGYLI 470
Cdd:PRK06590 476 PFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAWLL 518
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
4-548 |
2.90e-72 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 242.68 E-value: 2.90e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 4 LSFVVLFMFSTFTFLISIYYLMFDYSVFIE-WEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNI 82
Cdd:MTH00020 31 LTSSCLIISLSWSFLIFYEILFNSSTTYIKlWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHI 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 83 NRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIGDVCILISIAWMLN-FG 160
Cdd:MTH00020 111 PRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 161 SWNYINYYYFI--FDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTY 238
Cdd:MTH00020 191 SLDFSSVFNMVvsAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 239 NYGWMLM-LIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNL 317
Cdd:MTH00020 271 PLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 318 SDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYS 397
Cdd:MTH00020 351 SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLT 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 398 MLGINNFYSSYFFN--DKSYFISFGMIGLLFVAVFGGSFLSWLIF--------PIPYMI-VLPWYLSGLTLFVVVlgFYF 466
Cdd:MTH00020 431 FLSNTNLKKAVFFHlhEGDWNLLLPLGILALGSIFVGYLAKEMIWsfqitlppIVPLSIkLLPVFLSLGGIGLVI--ILY 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 467 GYLISDFNYFcglFSLNFMSFVSFVVSMWFMPFLSTSYISYVPLSFGYSL-LKSFDYGRGEMLGGQGLYSFFMYLIDYIQ 545
Cdd:MTH00020 509 FYSSKTFRVP---FSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLIsYRTIDKGVLELVGPKGISNFLIILTQGLS 585
|
...
gi 887513769 546 SLY 548
Cdd:MTH00020 586 SLQ 588
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
50-569 |
1.50e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 235.67 E-value: 1.50e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 50 FDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLV-IYYQN 128
Cdd:MTH00210 78 FDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 129 VKSYNAGMLTALSNRIGDVCILISIAWMLN-FGSWNY---INYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAA 204
Cdd:MTH00210 158 IKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFstiSSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 205 MAAPTPVSALVHSSTLVTAGVYLLIR------FSPMLLTynygwMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLG 278
Cdd:MTH00210 238 MEGPTPVSALIHAATMVTAGVFLIIRsgplfeGSPLALT-----IVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 279 LMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYS 358
Cdd:MTH00210 313 YMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 359 KDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGINNFYSSYFFN--DKSYFISFGMIGLLFVAVFGGS--- 433
Cdd:MTH00210 393 KDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGYlgk 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 434 --FLSWLIFPIpymivLPWYLSGLTLFVVVLGFYFGYLISDFNYFC------GLFSLNFMSFVSFVVSMWFMPFLSTSYI 505
Cdd:MTH00210 473 evVLSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVIYNSMVFLikisrrGVSIRLYHVIYTFLNSAWQFNYVINHFI 547
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 887513769 506 SYVPLSFGYSL-LKSFDYGRGEMLGGQGLYSFFMYLIDYIQSLYDSNFKVYLLpFIFWMFILFMF 569
Cdd:MTH00210 548 VKNIWKFGHLItYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYAL-IMIIFTTLFIS 611
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-520 |
1.44e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 206.69 E-value: 1.44e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 1 MCSLSFVVLFMFSTFTFLISIYYLMFDYSVFIEWEIFSLngsmvimTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNES 80
Cdd:MTH00095 1 MNILIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSL-------KFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGEL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 81 NINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAWMLNFG 160
Cdd:MTH00095 74 NFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 161 swnyinyYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNY 240
Cdd:MTH00095 154 -------YYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNV 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 241 GWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDS 320
Cdd:MTH00095 227 MKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQ 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 321 QDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFyysMLG 400
Cdd:MTH00095 307 QDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLW---KSF 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 401 INNFYSSYFFNDKSYFISFGMIGLLFVAVFggsFLSWLIFpipYMIVLPWYLSGLTLFVVVLGFYFGYLISDFNYFCGLF 480
Cdd:MTH00095 384 FLSFSKVVNVYSSSVLMNFLSLMLVFFSVF---FLWWLNF---NLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFK 457
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 887513769 481 SLNFMSFVSFVVSMWFMPFLSTSYISYVPLSFGYSLLKSF 520
Cdd:MTH00095 458 ELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFGYKGFNFF 497
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
46-395 |
1.13e-57 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 204.49 E-value: 1.13e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 46 MTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLV-I 124
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 125 YYQNVKSYNAGMLTALSNRIGDVCILISIAWMlnfgswnyinyyYFIFDSFEMKII---------------------TML 183
Cdd:PRK07376 165 WYDRKGAADAAQKAFVVNRVGDFGLLLGILGL------------FWATGSFDFDGIadrlselvssgavsgwlalllCIL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 184 IIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNY-GWMLMLIGCMTMFMAGLGANFE 262
Cdd:PRK07376 233 VFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAvMTVIAWTGAITAFLGASIALTQ 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 263 FDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSD--------SQDIRFMGSIVNFMP 334
Cdd:PRK07376 313 NDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMP 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 887513769 335 LTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSwvNSLIFLLFFLSTGLTASYSFRLFY 395
Cdd:PRK07376 393 ITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYF 451
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-566 |
9.05e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 193.64 E-value: 9.05e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 1 MCSLSFVVLFMFSTFTFLISIYYLMFDYSVFIEWEIFslngsMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNES 80
Cdd:MTH00032 34 ICMGSSTLIALFLAYEVLINDAVVHIELYKWIESEIF-----ITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 81 NINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQN-VKSYNAGMLTALSNRIGDVCILISIAWM--- 156
Cdd:MTH00032 109 HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIykt 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 157 ---LNFGSWNYINYYYFIFDSFEMK------------IITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLV 221
Cdd:MTH00032 189 igsLDFLTFNGGSVGSGIMDRGYYGggayesplapfaIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 222 TAGVYLLIRFSPMLLTYNYGWMLMLI-GCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSM-GYYVLAFFHMLTH 299
Cdd:MTH00032 269 TAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 300 ALFKALLFMCAGSMIHNLS-DSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCL---------- 368
Cdd:MTH00032 349 AFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSgrnmgipfgs 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 369 --------------------------SWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGINNFYSSYFFNDKSYFISFGMI 422
Cdd:MTH00032 429 sllkiqgdigikkddrgsiggpegypSRGSAFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVL 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 423 GLLFVAVFGGSFLSWLIFPI-----------PYMIVLPWYLSGLTLFVVVLGFYFGYLISDFNYFCGLFSLNFMSFVSFV 491
Cdd:MTH00032 509 TVLSLLCFGAIFVGYLIQDIligdiehpivpPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFL 588
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 887513769 492 VSMWFMPFLSTSYISYVPLSFG-YSLLKSFDYGRGEMLGGQGLYSFFMYLIDYIQSLYDSNFKVYLLPFIFWMFIL 566
Cdd:MTH00032 589 GGAWQGDHLINKLVAIPLFSFGhWGIYKTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLLSFTIIF 664
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-382 |
7.52e-50 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 174.04 E-value: 7.52e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 102 SPNLISILLGWDGLGLVSYCLVIYY-QNVKSYNAGMLTALSNRIGDVCILISIAWMLNFGSWNYI----NYYYFIFDSFE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdelsKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 177 MKIITMLIIIASMTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLTYNYGWM--LMLIGCMTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIQqiLLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 254 MAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGY---YVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFMGSIV 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 887513769 331 NFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLS 382
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-396 |
6.41e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 167.25 E-value: 6.41e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 127 QNVKSYNAGMLTALSNRIGDVCILISIAWM-LNFGSWNYINYYYFI--FDSFEMKIITMLIIIASMTSSAQIPFSSWLPA 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 204 AMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLLTYN----YGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLG 278
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADpalfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 279 LMMSILSMGYYVL---AFFHMLTHALFKALLFMCAGSMIHNLsDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVG 355
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 887513769 356 FYSKDLILEVVcLSWVNSLIFLLFFLSTGLTASYSFRLFYY 396
Cdd:COG0651 389 FVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
40-393 |
2.40e-44 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 169.07 E-value: 2.40e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 40 NGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVS 119
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 120 YCLVIyyQNVKSYNAG-MLTALSNRIGDVCILISIAWM------------LNFGSWNYinyyyfifDSFEMKIITMLIII 186
Cdd:PRK12650 147 FFLIA--RSGSGGEAGsIRTLILTFFGGLTLLAAVAIAatqtgttslsgiLHSDVWAE--------KPGLTTVVAVLIAV 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 187 ASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLLTYNYGWMLMLIGC--MTMFMAGLGANFEFD 264
Cdd:PRK12650 217 AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP-VFHDVAVWNWLLIIVgmITALMGAVFAVQKTD 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 265 LSKVIALSTLSQLGLMMSILSMGYYV---LAFFHMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSMCFN 341
Cdd:PRK12650 296 LKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVT 374
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 887513769 342 VSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTA----SYSFRL 393
Cdd:PRK12650 375 IAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAvftfAYSARL 430
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-392 |
4.08e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 165.36 E-value: 4.08e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 127 QNVKSYNAGMLTALS-NRIGDVCILisiAWMLNFGSwnyinyyyfIFDSFEMKII----------------TMLIIIASM 189
Cdd:PRK12648 151 HHRADARRGARMALTvTGAGGLALL---AGVLLLGH---------IVGSYDLDVVlaagdlirahplyppaLVLILLGAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 190 TSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLL-TYNYGWMLMLIGCMTMFMAGLGANFEFDLSKV 268
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAgTEEWFWIVGGAGLITLLLGAYFALFQHDLKGL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 269 IALSTLSQLGLMMSILSMGY---YVLAFFHMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSMCFNVSSL 345
Cdd:PRK12648 299 LAYSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAA 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 887513769 346 SLCGMPFLVGFYSKDL----ILEVVCLSWVNSLIFLLFFLSTGLTASYSFR 392
Cdd:PRK12648 378 AMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-419 |
1.88e-42 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 162.37 E-value: 1.88e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 67 LVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTALSNRIG 145
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 146 DVCILISIA---WMLN----------FGSWNYINYYYFIFdsfeMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVS 212
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlfeiFNNLIYNNEVNLLF----ATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPIS 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 213 ALVHSSTLVTAGVYLLIRFSPMLLTYNYgwmLM----LIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGY 288
Cdd:CHL00025 262 ALIHAATMVAAGIFLVARLLPLFIVIPY---IMnlisLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGS 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 289 YVLAFFHMLTHALFKALLFMCAGSMIHNL--------SDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKD 360
Cdd:CHL00025 339 YRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKD 418
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 887513769 361 LILEVvclSWVNSLIFLLFFLST-GLTASYSFRLFYYSMLG---INNFYSSYFFNDKSYFISF 419
Cdd:CHL00025 419 EILND---SWLYSPIFAIIAWSTaGLTAFYMFRIYLLTFEGhlrVHFQNYSGKKNSSFYSISL 478
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-366 |
4.31e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 161.63 E-value: 4.31e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 48 FIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY-Y 126
Cdd:PRK12647 60 FLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnH 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 127 QNVKSYNAGMLTALSNRIGDVCILI------------SIAWMLNFGSWNYINYYYFIfdsfemkiITMLIIIASMTSSAQ 194
Cdd:PRK12647 140 EREAARRAALQALLVTGGGGLALLAglillgnvtgtySLSELLASGDVIREHPLYLA--------ILLLVLGGAFTKSAQ 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALST 273
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 274 LSQLGLMMSILSMG--YYVLAFF-HMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGM 350
Cdd:PRK12647 292 VSALGTLVMLLGLGseLAIKAAVlFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGL 370
|
330
....*....|....*.
gi 887513769 351 PFLVGFYSKDLILEVV 366
Cdd:PRK12647 371 PPLFGFLAKELIYEAL 386
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
47-366 |
1.20e-41 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 160.40 E-value: 1.20e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 127 -QNVKSYNAGMLTALSNRIGDVCILISIAWML----NFGSWNYINYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWL 201
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLM 280
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 281 MSILSMG------------YYVLAF----FHMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSMCFNVSS 344
Cdd:TIGR00940 310 MVLLGLGspsyhyqgddskIYALAAvaavFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|..
gi 887513769 345 LSLCGMPFLVGFYSKDLILEVV 366
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFAEA 410
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
48-364 |
1.99e-39 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 153.76 E-value: 1.99e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 48 FIFDWMSLIFMSFVMYISSLVIYYSNDYMYNES-NINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYw 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 126 YQNVKSYNAGMLTALSNRIGDVCILISIAWMLNFGSWNYI----NYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWL 201
Cdd:PRK12646 154 YNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNIteilGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLM 280
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLgLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 281 MSILSMG-------------YYVL----AFFHMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSMCFNVS 343
Cdd:PRK12646 314 MAMVGIGggyaqhqqdaiasIYVFvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIA 392
|
330 340
....*....|....*....|.
gi 887513769 344 SLSLCGMPFLVGFYSKDLILE 364
Cdd:PRK12646 393 ALSMAGVPFLNGFLSKEMFLD 413
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
8-486 |
1.72e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 145.41 E-value: 1.72e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 8 VLFMFSTFTFLISIYYLMFDYSVFIEWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVI 87
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 88 LVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAWmlnfgswnyinY 167
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL-----------S 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 168 YYFIFDSFEMKIITMLIIIasmTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNYGWMLMLI 247
Cdd:MTH00063 150 CWGGSGSFLCCLFFFLIVF---TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 248 GCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFMG 327
Cdd:MTH00063 227 LLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVY 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 328 SIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYsMLGINNFYSS 407
Cdd:MTH00063 307 SSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLI-LFGVKSSLSS 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 408 YFFNDksYFISFGMigllfvaVFGGSFLSWLIFPI-PYMIVLPWYLSGLTLFVVVLGFYFGYLISDFNYFCGLFSLNFMS 486
Cdd:MTH00063 386 GVRFL--FFNSGLM-------VFLWLFINYYVFLLlDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLFSNWSSSLFGC 456
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-395 |
8.31e-37 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 146.22 E-value: 8.31e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYM-YNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 126 YQNVKS-----YNAGMLTALsnriGDVCILISIAWMLNF-GSWNYINYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSS 199
Cdd:PRK12644 149 YAERAAsrraaLQALLVTTA----GGLAMLVGIIILGQAaGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 200 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNYgWMLMLI--GCMTMFMAGLGANFEFDLSKVIALSTLSQL 277
Cdd:PRK12644 225 WLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPV-WRPTVLvlGLATMLLGGWRALRQHDLKLILAYGTVSQL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 278 GLMMSILSMGYY--VLAFFHMLT-HALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLV 354
Cdd:PRK12644 304 GFLTVLVGIGTRdaALAGLAMLLaHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLL 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 887513769 355 GFYSKDLILEVV----CLSWVNSLIFLLFFLSTGLTASYSFRLFY 395
Cdd:PRK12644 383 GFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
389-570 |
2.35e-35 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 131.13 E-value: 2.35e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 389 YSFRLFYYSMLGINNFYSSYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIFPIPYMIVLPWYLSGLTLFVVVLGFYFGY 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 469 LISDFNYFCGLFSLNFMSFvSFVVSMWFMPFLSTSYISYVPLSFGYSLLKSFDYGRGEMLGGQGLYSFFMYLIDYIQSLY 548
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFNLH-SFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 887513769 549 DSNFKVYLLPFIFWMFILFMFF 570
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
51-366 |
2.81e-35 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 141.60 E-value: 2.81e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 51 DWMSLIFMSFVMYISSLVIYYSNDYMYNES-NINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY-YQN 128
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYwYER 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 129 VKSYNAGMLTALSNRIGDVCIL------------ISIAWMLNFGSwNYINYYYFIFdsfemkiITMLIIIASMTSSAQIP 196
Cdd:PRK12645 157 EASRYGAQKSMLITVFGGLSMLggfillyimtgsFSIREMIANAD-EIQNSPLFIP-------AMILILLGAFTKSAQFP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 197 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-LTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLS 275
Cdd:PRK12645 229 FYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFaGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 276 QLGLMMSILSMG------------YYVLAF----FHMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSMC 339
Cdd:PRK12645 309 QLGLIMSLLGIGaaslhyqgddskIYAAAItaaiFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTI 387
|
330 340
....*....|....*....|....*..
gi 887513769 340 FNVSSLSLCGMPFLVGFYSKDLILEVV 366
Cdd:PRK12645 388 ALIGALSMAGLPPFNGFLSKEMFFESM 414
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
10-363 |
1.20e-34 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 136.64 E-value: 1.20e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 10 FMFSTFTFLISIYYLMFDYSVFIEWEIFSLN--GSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNE-------S 80
Cdd:PRK06525 31 VLFAALTTLCMLSLAYAFYQAGKVAVTLTLVnlGDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGnrehpvhE 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 81 NINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAWMlnfg 160
Cdd:PRK06525 111 GTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATL---- 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 161 swnYINYYYFIFDSF-----EMKIITMLII-IASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF--S 232
Cdd:PRK06525 187 ---FLQTGTFALSALsglhgSLKYLVFLGIlFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAiqS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 233 PMLLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVL------AFFHMLTHALFKALL 306
Cdd:PRK06525 264 MGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlalegSIAYIFNHAFAKSLF 343
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 887513769 307 FMCAGSMIHNLSdSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLIL 363
Cdd:PRK06525 344 FLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-364 |
7.77e-31 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 128.02 E-value: 7.77e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 46 MTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12649 74 FSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGY 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 126 YQNVKSYNAGMLTALSNRIGDVCILISIAWML-----NFGSWNYINYYYFI--FDSFEMKIITM-LIIIASMTSSAQIPF 197
Cdd:PRK12649 154 WRHRPESVYGATKSLLITAGGGLFMFAGFLLLhvitgTYDIATILQDSELIenIKGHPLFLITLiLIFIGAAAKSAQGPF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 198 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLLTYNYGWMLML--IGCMTMFMAGLGANFEFDLSKVIALSTLS 275
Cdd:PRK12649 234 YIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHP-IFSGTEAWFILVsgTGMITMVLAGFLAFRQTDIKAILAYSTIS 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 276 QLGLMMSILSMGYY-------VLAFFHMLTHALFKALLFMCAGSMIHNLSdSQDIRFMGSIVNFMPLTSMCFNVSSLSLC 348
Cdd:PRK12649 313 QLAYLMTMYGYTTYhepglgvAAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMA 391
|
330
....*....|....*.
gi 887513769 349 GMPFLVGFYSKDLILE 364
Cdd:PRK12649 392 GIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-400 |
7.57e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 122.68 E-value: 7.57e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 47 TFIFDWMSLIFMSFVMYISSLVIYYSndYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 127 QNVKSYNAGMLTALSNRIGDVCILISIAwmlnfgswnyinYYYFIFDSFEMKIIT-------------MLIIIASMTSSA 193
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVG------------LLYGVTGTLNMADLAgalaenptvvtafGFVLLALALKAA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS------PMLLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSK 267
Cdd:PRK08375 218 VFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKR 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 268 VIALSTLSQLG---LMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSMCFNVSS 344
Cdd:PRK08375 298 VLAYSTVSQMGyilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVAS 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 887513769 345 LSLCGMPFLVGFYSK-DLILEVVCLSWVNSLIFLLffLSTGLTASYSFRLFYYSMLG 400
Cdd:PRK08375 377 LSLIGVPPTSGFVSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYRAFFG 431
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-312 |
1.29e-26 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 113.64 E-value: 1.29e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 53 MSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKsy 132
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 133 nAGMLTA----LSNRIGDVCILISIA-WMLNFGSWNyINYYYFIFD----SFEMKIITMLIIIASMTSSAQIPFSSWLPA 203
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLS-LSALWAHLAaqgaSPSLQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 204 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLLTYNYG-WMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMS 282
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260 270
....*....|....*....|....*....|
gi 887513769 283 ILSMGYYVLAFFHMLTHALFKALLFMCAGS 312
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
3.66e-25 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 109.82 E-value: 3.66e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 46 MTFIFDWMSLIFMSFVMYISSLVIYYS---NDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSlgyNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 123 VIY-YQNVKSYNAGMLTALSNRIGDVCILISIAWM-LNFGSWNYINYYYfifDSFEMKIITMLIIIASMTSSAQIPFSSW 200
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLGA---SAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 201 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLLTYNYGW--MLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQL 277
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 278 GLMMsiLSMGYYVL----------------AFFHMLTHALFKALLFMCAGSMIHNLSDsQDIRFMGSIVNFMPLTSMCFN 341
Cdd:PRK08667 307 GIIL--MGIGLYVIfgvygldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFL 383
|
330 340
....*....|....*....|...
gi 887513769 342 VSSLSLCGMPFLVGFYSKDLILE 364
Cdd:PRK08667 384 VGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
91-369 |
4.72e-22 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 100.35 E-value: 4.72e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 91 MFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKS-YNAGMLTALSNRIGDVCILISIAWML-NFGSWNYINYY 168
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 169 YFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLL---TYNYGWML 244
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLgapGWWWGVLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 245 MLIGCMTMFMAGLGANFEFDLSKVIALST-------LSQLGLMMSILSMGYYVLA-------FFHMLTHALFKALLFMCA 310
Cdd:PRK06521 280 LALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSLLFLGA 359
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 887513769 311 GSMIHNLSdSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLS 369
Cdd:PRK06521 360 GAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-429 |
8.22e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 98.74 E-value: 8.22e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 3 SLSFVVLFMFSTFTFLISIYYLMFDYSVFIeweiFSLNGSMVImTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNES-- 80
Cdd:PRK06589 39 FLLITISIFFFGNILLIDLLFLKGIRAQFE----LMDFGNYSI-GLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNid 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 81 NINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGmLTALSNRIGDVCILISIAWMLNFG 160
Cdd:PRK06589 114 SSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGG-YKYLKILMISALLLFLPAVILIYT 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 161 SWNYINYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNY 240
Cdd:PRK06589 193 KTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSY 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 241 -------GWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMM---SILSMGYYVLAFFHMLTHALFKALLFMCA 310
Cdd:PRK06589 273 lqrifaeFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsaFILTPKALGAAILHLVSHSFAKICLFYSM 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 311 GSmIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLswvNSLIFLLFFLSTGLTASYS 390
Cdd:PRK06589 353 GS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASE---QNQPWLSIIVMLVVIASSI 428
|
410 420 430
....*....|....*....|....*....|....*....
gi 887513769 391 FRLFYYSMLGINNFYSSYffnDKSYFISFGMIGLLFVAV 429
Cdd:PRK06589 429 LSALYLLKILSSIYKPSL---SENSFITKSLPYLMQISV 464
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
140-387 |
5.19e-21 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 96.90 E-value: 5.19e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 140 LSNRIGDVCILISIAWMLNF-GSWNYINYYYFI----FDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSAL 214
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAatanLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 215 vHSSTLVTAGVYLLIRFSPML-LTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAF 293
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLaLSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 294 FHMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSkdlILEVVCLSWVNS 373
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVS 412
|
250
....*....|....*
gi 887513769 374 LIFLLFFLST-GLTA 387
Cdd:PRK07390 413 PWLVGVLLLVnALTA 427
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-400 |
1.01e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 95.55 E-value: 1.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 48 FIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQ 127
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 128 NV-KSYNAGMLTALSNRIGDVCILISIAwmLNFGSWNYINYYYF----IFDSFEMKIITMLIIIASMT-SSAQIPFSSWL 201
Cdd:PRK08376 166 DTwEAIEAGIKYMFVGSLASSMVLLGIA--LLYGQYGTLNMAYLavkmSENPTVVAKIALALFIAGLAmKSGAVPVHMWL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 202 PAAM-AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLS 275
Cdd:PRK08376 244 PDAYpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVS 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 276 QLGLMMSILSMGYYVL---------------AFFHMLTHALFKALLFMCAGSMIHNLSdSQDIRFMGSIVNFMPLTSMCF 340
Cdd:PRK08376 322 QIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAF 400
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 341 NVSSLSLCGMPFLVGFYSKDLILEVVCLswVNSLIFLLFFLSTGLTASYSFRLFYYSMLG 400
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-401 |
2.89e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 94.27 E-value: 2.89e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 127 QNVK-SYNAGMLTALSNRIGDVCILISIAWM------LNFGSWNYINYYYFIFDSFE--------MKIITMLIIIASMTS 191
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMADLSAKIRGLSFPLTGGlagnpplaLGVALALALWAFTIK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 192 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLLTYN---------YGWMLMLIGCMTMFMAGLGANF 261
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISpslidfraaLSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 262 EFDLSKVIALSTLSQLGLMMSILSMGY-YVL--AFFHMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTSM 338
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTqLGLaaALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 887513769 339 CFNVSSLSLCGMPFLVGFYSKDLILEVVcLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLGI 401
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNAL-LESGFYLPALVLLIASAISLVGYFRAWYSLFFGK 456
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-364 |
6.30e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 89.63 E-value: 6.30e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 85 FVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGM-LTALSNrIGDVCILISIAWMlnfgswn 163
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAVLV------- 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 164 yinyyYFIFDSFEMKIITM-------LIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLl 236
Cdd:PRK07234 168 -----YQANGTFAFSGLATadpeafaLIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDV- 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 237 tYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGyyvlAFFHmLTHALFKALLFMCAGSmIHN 316
Cdd:PRK07234 242 -PGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPS 314
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 887513769 317 LSDSQDIRFMGSIVNFMPLTsmcfnVSSLSLCGMPFLVGFYSKDLILE 364
Cdd:PRK07234 315 RNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
60-393 |
2.79e-17 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 84.82 E-value: 2.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 60 FVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTA 139
Cdd:PRK08377 85 LIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYI 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 140 LSNRIGDVCILISIAwmLNFGSWNYINYYYF-----IFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAA-MAAPTPVSA 213
Cdd:PRK08377 165 VLGGIGSSFFLIGVA--LIYGATGTLNMAHIaqlagTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAyQAAPHPITV 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 214 LVhSSTLVTAGVYLLIRFSPMLLTYN----YGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYY 289
Cdd:PRK08377 243 MF-SAFVVKAGLYAMARILYLMQNANgwssVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 290 V---LAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFMGSIVNfMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILeVV 366
Cdd:PRK08377 322 AgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKR-MPLTALALTIGALSTVGIPLFNVFWSKFRII-LA 399
|
330 340
....*....|....*....|....*..
gi 887513769 367 CLSWVNSLIFLLFFLSTGLTASYSFRL 393
Cdd:PRK08377 400 GLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
40-312 |
6.07e-17 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 83.93 E-value: 6.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 40 NGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWdGLGLVS 119
Cdd:PRK08601 60 NGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCW-GATLLG 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 120 YCLVIyyqNVKSY-----NAGMLTALSNRIGDVCILISIAWM-LNFGSW----NYINYYYFIFDSFEMKIITMLIIIASM 189
Cdd:PRK08601 139 LTLLI---GLNKGwkvarEAAKISGMLFLISWLALALAIVWLfIATGEWqltsVLSNENLAQLGTWEKTGINLLLILAVM 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 190 TSSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPmLLTYNYGWMLMLIGCMTMFMAGLGANF-EFDLSKV 268
Cdd:PRK08601 216 IPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSP-LFHDDIAQILLLIFASISVLIGTGISLvQVDYKRQ 293
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 887513769 269 IALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGS 312
Cdd:PRK08601 294 LVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
196-400 |
3.07e-16 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 81.67 E-value: 3.07e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 196 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFSPMLL---TYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIAL 271
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 272 STLSQLGLM-MSILSMGYYVL--AFFHMLTHALFKALLFMCAGsMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLC 348
Cdd:COG1008 306 SSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 887513769 349 GMPFLVGFYSKDLILevVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLG 400
Cdd:COG1008 385 GLPGTSGFVGEFLVL--LGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFG 434
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-363 |
2.27e-15 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 79.17 E-value: 2.27e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 105 LISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAW-MLNFGSwnyinyyyFIFDSF--EMKIIT 181
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGS--------FAFGAIagLGGTAA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 182 MLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP--MLLTYnygwmlmlIGC-MTMFMAGLg 258
Cdd:PRK12668 187 WLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPgtELLIY--------IGAaMAVYGVFF- 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 259 ANFEFDLSKVIALSTLSQLGLMMSILSMGYYVL---AFFHMLTHALFKALLFMCAGSMIHNLSDSqDIRFMGSIVNFMPL 335
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPL 336
|
250 260
....*....|....*....|....*...
gi 887513769 336 TSMCFNVSSLSLCGMPFLVGFYSKDLIL 363
Cdd:PRK12668 337 TALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
13-400 |
1.90e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.19 E-value: 1.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 13 STFTFLISIYYLMFDYSVFI-EWEIFSLNGSMVIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYmyNESNINRFVILVLM 91
Cdd:PRK08668 29 VIGNALPLLFLIKLYFTLKVgTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSE--KTKNDAYFNMFALM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 92 FIFSMVLLIISPNLISILLGWDGLGLVSYcLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAWMLN-FGSWNYINYYYF 170
Cdd:PRK08668 107 SLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 171 IFD--SFEMK-IITMLIIIASMTSSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLLTYN------- 239
Cdd:PRK08668 186 LINdtSTGFAlIVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTKlfsefgt 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 240 ------YGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGY---YVLAFFHMLTHALFKALLFMCA 310
Cdd:PRK08668 265 yrgvplFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALFKGLFFLIF 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 311 GSMIHNLSDSQdIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTGLTAsYS 390
Cdd:PRK08668 345 AAVIYRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFL-YV 422
|
410
....*....|
gi 887513769 391 FRLFYYSMLG 400
Cdd:PRK08668 423 FRPLAGVFLG 432
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
51-400 |
4.12e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 71.51 E-value: 4.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 51 DWMSLIFMSFVMYISSLVIYYSndYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNVK 130
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILAS--WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 131 SYNAGMLTALSNRIGDVCILISIAWM--LNFGSWNYINYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMA-A 207
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 208 PTPVSALVhSSTLVTAGVYLLIRFSPMLL---TYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGL-MMSI 283
Cdd:TIGR01972 234 PTAGSVIL-AGVLLKMGTYGFLRFNLPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 284 LSMGYYVL--AFFHMLTHALFKALLFMCAGsMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDL 361
Cdd:TIGR01972 313 FSFNELGIsgAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
330 340 350
....*....|....*....|....*....|....*....
gi 887513769 362 ILevVCLSWVNSLIFLLFFLSTGLTASYSFRLFYYSMLG 400
Cdd:TIGR01972 392 IL--LGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
195-356 |
1.27e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 70.63 E-value: 1.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 195 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPM--LLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIAL 271
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLggNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 272 STLSQLGLMMSILSMGYYVLA--------------FFHMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPLTS 337
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 887513769 338 MCFNVSSLSLCGMPFLVGF 356
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
140-400 |
2.95e-11 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 65.99 E-value: 2.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 140 LSNRIGDVCILISIAWM-----LNFGSWNYINYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMA-APTPVSA 213
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 214 LvHSSTLVTAGVYLLIRFS-PML--LTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLG-LMMSILSMGYY 289
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 290 VL--AFFHMLTHALFKALLFMCAGSMIHNLSdSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILevvc 367
Cdd:PRK05846 327 GIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL---- 401
|
250 260 270
....*....|....*....|....*....|....*
gi 887513769 368 LSWVNSLIFLLFFLSTG--LTASYSFRLFYYSMLG 400
Cdd:PRK05846 402 LGSFQVNPVIAFIATTGliLAAVYSLWLYQRVMFG 436
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-366 |
2.33e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.83 E-value: 2.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 49 IFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQN 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 129 VKSYNAGMLTALSNRIGDVCILISIAWMLNF-GSWNYINYYYFIFDSFEMKII---TMLIIIASMTSSAQIPFSSWLPAA 204
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGATFYLIGIGFLYAItGTLNMGDMFLIIQDLPTNRAIqigVLFIMVGLFIKAALFPFHKWLIQA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 205 MAAPTPVSALVHSSTLVTAGVYLLIRF-------SPMLLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQL 277
Cdd:PRK12662 236 YSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHI 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 278 GLMMSILSMGYY---VLAFFHMLTHALFKALLFMCAGSMIHNLsDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLV 354
Cdd:PRK12662 316 GYIILAVSLNTYyglAAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTS 394
|
330
....*....|..
gi 887513769 355 GFYSKDLILEVV 366
Cdd:PRK12662 395 GFVAKWYILDAF 406
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-364 |
3.14e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 62.68 E-value: 3.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 193 AQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLLTYNYGW-MLMLIGCMTMFMAGLGANFEFDLSKVIA 270
Cdd:PRK12665 224 AVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDtLLMVVALLTMVVGILGAIAQSDIKRLLS 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 271 LSTLSQLGLMMSILSMGY---YVLAFFHMLTHALFKALLFMCAGsMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSL 347
Cdd:PRK12665 303 FTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNL 381
|
170
....*....|....*..
gi 887513769 348 CGMPFLVGFYSKDLILE 364
Cdd:PRK12665 382 GGIPPFSGFIGKVALLE 398
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-359 |
4.38e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 62.06 E-value: 4.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 8 VLFMFSTFTFLISIYYLMFDYSVFiewEIFSLNGSmvimtFIFDWMSLIFMSFVMYISSLVIYYSNDYMY-NESNINRFV 86
Cdd:COG1007 34 LLAGLALLGLLLALALLLLALGGG---TGTAFGGM-----FVVDGFALFFKLLILLAALLVLLLSRDYLErRGLLRGEFY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 87 ILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSYNAGM----LTALSNRIgdvcILISIAWMLNF-G 160
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 161 SWNYINYYYFIFDSFEMK---IITMLIIIASM---TSSAqiPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRF- 231
Cdd:COG1007 182 SLNLAGIAAALAAGGANSpllLLGLVLVLAGLafkLSAV--PFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLl 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 232 --SPMLLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLG-LMMSILSMGY--YVLAFFHMLTHALFKALL 306
Cdd:COG1007 258 veAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGyLLLGLAAGTPlgVSAALFYLLAYLFMNLGA 337
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 887513769 307 FMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSK 359
Cdd:COG1007 338 FAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-394 |
4.56e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 62.08 E-value: 4.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 182 MLIIIASMTSSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLLTYNYGW----MLMLIGCMTMFMAG 256
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEqfsnVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 257 LGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAF---FHMLTHALFKALLFMCAGsMIHNLSDSQDIRFMGSIVNFM 333
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 887513769 334 PLTSMCFNVSSLSLCGMPFLVGFYSKDLIL-EVVCLS-WVNSLIFLLFFLSTGLTASYSFRLF 394
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-364 |
5.70e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 61.89 E-value: 5.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 177 MKIITMLIIIASMTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLTYNYGWMLMLIGCM---TM 252
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFTHYLILILallTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 253 FMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGY---YVLAFFHMLTHALFKALLFMCAGSMIHnLSDSQDIRFMGSI 329
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTesgMIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190
....*....|....*....|....*....|....*
gi 887513769 330 VNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILE 364
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
173-400 |
5.96e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 61.89 E-value: 5.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 173 DSFEMKIITMLIIIASMTSSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNYG---WMLMLIGC 249
Cdd:PRK12663 202 DTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQEREllhPLLATMAA 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 250 MTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVL---AFFHMLTHALFKALLFMCAGSMIHnLSDSQDIRFM 326
Cdd:PRK12663 281 ITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYL 359
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 887513769 327 GSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSwvNSLIFLLFFLSTGLTASYS-FRLFYYSMLG 400
Cdd:PRK12663 360 GGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSlFRIFFLAYWG 432
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
48-363 |
1.37e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 57.25 E-value: 1.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 48 FIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRFVILVL--------MFIFSMVLLIISPNLISILLGWDGLGLVS 119
Cdd:PRK06458 65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVEHGELSPVTLrlyygmyqLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 120 YCLVIYYQNVKSYNA----------GMLTALsnrIGDVCILISIAWMLNFGS----WNYINYYYFIFDSFEMKIITMLII 185
Cdd:PRK06458 145 ALLVGIYRTRASLEAawkyiiicsvGVAFAL---FGTILVYANAATVMGDGEmailWTELLKHASLLDPTLMKLAFVFLL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 186 IASMTSSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpMLLTYNYGW-----MLMLIGCMTMFMAGLGA 259
Cdd:PRK06458 222 IGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYY-ILIDAAIGSdfpgrLLLIFGLLSVLVAAFFL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 260 NFEFDLSKVIALSTLSQLGLMMSILSMGYyVLAFF----HMLTHALFKALLFMCAGSMIHNlSDSQDIRFMGSIVNFMPL 335
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGG-PLGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPL 377
|
330 340
....*....|....*....|....*...
gi 887513769 336 TSMCFNVSSLSLCGMPFLVGFYSKDLIL 363
Cdd:PRK06458 378 TGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
46-384 |
9.33e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.57 E-value: 9.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 46 MTFIFDWMSLIFMSFVMYISSLVIYysnDYMYNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 126 YQNVKSYNAGMLTALSNRIGDVCILISIAWMLNF-GSWNYINYYYFIFDSFEMKIITM---LIIIASMTSSAQIPFSSWL 201
Cdd:PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNITDIHNALLVNPTSPVIYGgllLLIFGLLYGSGLPPFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 202 PAAMAAPTP-VSALVHSS---TLVTAGVYLLIRFSPMLLTYNYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQL 277
Cdd:PRK06277 223 SDIYAKAKPfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQG 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 278 GLMMSILSMGY---YVLAFFHMLTHALFKALLFMCAGSmIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLV 354
Cdd:PRK06277 303 GYVAAGLALGTplgIVAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN 381
|
330 340 350
....*....|....*....|....*....|
gi 887513769 355 GFYSKDLILEVVCLSWVNSLIFLLFFLSTG 384
Cdd:PRK06277 382 GFQSKLMLAQAAMQANMPELAIIMIIVSIG 411
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-359 |
1.00e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 51.36 E-value: 1.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 47 TFIFDWMSLIFMSFVMYISSLVIYYSNDYMyNESNINRFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 126 YQNVKSYNAGM----LTALSNRIgdvcILISIAWMLNF-GSWNYINYYYFIFDSFEMKII----TMLIIIASMTSSAQIP 196
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLllfgLVFLLVGLAFKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 197 FSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLLTYNYGW---MLMLIGCMTMFMAGLGANFEFDLSKVIALS 272
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 273 TLSQLGLMM---SILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCG 349
Cdd:PRK05777 302 SIAHAGYLLvglAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|
gi 887513769 350 MPFLVGFYSK 359
Cdd:PRK05777 382 IPPTAGFWGK 391
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
23-440 |
4.05e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 49.73 E-value: 4.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 23 YLMFDYSVFIEWEIFSLNGSmvIMTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNEsninrfVILVLMFIFSMVLLIIS 102
Cdd:PRK12664 11 YGFFFGLIFIVLPLLLYDWS--EPVYNLDLVLFIVLSFSLALIFLYILPIKNMRFSE------MLCYLLYYISSIAAISS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 103 PNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVCILISIAWMLNFGSWNYINYYYFIfdsfemkiITM 182
Cdd:PRK12664 83 SSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYCKLLFM--------LGL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 183 LIIIASMtssaqiPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLLTYNYGWMLMLIGCMTMFMAGLGANFE 262
Cdd:PRK12664 155 LINCACF------PASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLE 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 263 FDLSKVIALSTLSQLGLMMSILSMGY-----YVLAFFHMLTHALFKALLFMCAGSMIhNLSDSQDIRFMGSIVNfMPLTS 337
Cdd:PRK12664 223 QNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVI-NRTRKFNLNRVGGLFK-MSLEA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 338 MCFNVSSLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIF--LLFFLSTGLTASYSFRLFYYSMLGINnfySSYFFNDKSY 415
Cdd:PRK12664 301 MCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYkkLFLICSLLLFASVGLKFFWYAFISKS---KSKPEAEKVY 377
|
410 420
....*....|....*....|....*.
gi 887513769 416 FIS-FGMIGLLFVAVFGGSFLSWLIF 440
Cdd:PRK12664 378 IGSkLSMIILVLICVVLGMFNSYLLF 403
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
93-364 |
1.60e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.86 E-value: 1.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 93 IFSMVLLIISPNLISILLGWDGLGLVSYCLVIYYQNvKSYNAGMLTALSNrigdvcilISIAWMLNFGSWNYINYYYFIF 172
Cdd:PRK06459 82 ILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAFVFMAFGE--------LSTVLILAGFAWAFIISGTTNF 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 173 DSFEMKIITMLIIIASMTSSAQIPF--SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNYGWM---LMLI 247
Cdd:PRK06459 153 SYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFgltILAI 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 248 GCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSIL-----------SMGYYVLA--FFHMLTHALFKALLFMCAGSMi 314
Cdd:PRK06459 233 GAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqlitSIEHFSLItvILYSFAHSVAKTGLFLSSGLQ- 311
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 887513769 315 hnlsDSQDIRFMGSIVNFMplTSMCFNVSSLSLCGMPFLVGFYSKDLILE 364
Cdd:PRK06459 312 ----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGGVASWLLLE 355
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
195-389 |
2.07e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 47.39 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 195 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLLTYNYGWM---LMLIGCMTMFMAGLGANFEFDLSKVIA 270
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 271 LSTLSQLG--LMMSILSMGYYVL-AFFHMLTHALFKALLFMCAGsMIHNLSDSQDIRFMGSIVN---FMPLTSMCFNVSS 344
Cdd:PRK06473 301 YSSIGHMGyiLLAAAAATPLSILaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNperGLPITGSLMILGV 379
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 887513769 345 LSLCGMPFLVGFYSKDLILEvvclswVNSLIF----LLFFLSTGLTASY 389
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLVFR------GSFPIFpvqtLLCMIGTGLTAVY 422
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
196-363 |
1.44e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 44.46 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 196 PFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPMLL------TYNYGWMLMLIGCM-TMFMAGLGANFEFDLSK 267
Cdd:PRK12666 228 PLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLFgpeagaSAGFGQDWLLPGGLaTLAFGAIGVLAAQRLRR 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 268 VIALSTLSQLGLMMSILSMGYYVL---AFFHMLTHALFKALLFMCAGSM----------------IHNLSDSQDIRFMGS 328
Cdd:PRK12666 306 LAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeLYDLDEEEEEEVGVA 385
|
170 180 190
....*....|....*....|....*....|....*
gi 887513769 329 IVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLIL 363
Cdd:PRK12666 386 IPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
195-389 |
2.55e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.93 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYNYGWM---LMLIGCMTMFMAGLGANFEFDLSKVIAL 271
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVapgLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 272 STLSQLG--LMMSILSMGYYVL-AFFHMLTHALFKALLFMCAGsMIHNLSDSQDIRFMGSIVN---FMPLTSMCFNVSSL 345
Cdd:PRK07363 302 SSIGHMGyiLVAAAAGTQLSLLgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAGM 380
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 887513769 346 SLCGMPFLVGFYSKDLILEVVCLSWvnSLIFLLFFLSTGLTASY 389
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQGSFSTF--PIPTLLCIVASGLTAVY 422
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
169-440 |
3.02e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 43.27 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 169 YFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSStlvtagvylLIRFSPMLLT--YNYGWMLML 246
Cdd:MTH00160 78 NMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMT---------WQKIAPLILLsyLINNNFIII 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 247 IGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFKALLFMCAGSMIHNLSDSQDIRFM 326
Cdd:MTH00160 149 IIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNK 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 327 GSIVNFMPLTSMcfnvssLSLCGMPFLVGFYSKDLILEVVCLSWVNSLIFLLFFLSTgLTASYSFRLFYYSMLgINNFYS 406
Cdd:MTH00160 229 SKKIKFLLFLNL------LSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRISYSSLM-LNYNKN 300
|
250 260 270
....*....|....*....|....*....|....
gi 887513769 407 SYFFNDKSYFISFGMIGLLFVAVFGGSFLSWLIF 440
Cdd:MTH00160 301 KWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
5-359 |
1.62e-03 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 41.14 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 5 SFVVLFMFSTFTFLISIYYLMFDYSvfiEWEIFSLNGSMVIMTFifdwmSLIFMSFVMYISSLVIYYSNDYMYN-ESNIN 83
Cdd:CHL00049 40 DIPWLYFISSTSLVMSITALLFQWR---EEPMISFSGNFQTNNF-----NEIFQFLILLCSTLCIPLSVEYIECtEMAIT 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 84 RFVILVLMFIFSMVLLIISPNLISILLGWDGLGLVSYCLVIYY-QNVKSYNAGMLTALSNRIGDVCILISIAWM--LNFG 160
Cdd:CHL00049 112 EFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVYGFSWLygLSGG 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 161 SWNYINYYYFIFDSFEMKIITMLIIIASMT-----SSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPM 234
Cdd:CHL00049 192 EIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDI 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 235 LLTY-NYGWMLML--IGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGYYVLAFFHMLTHALFkaLLFMCAG 311
Cdd:CHL00049 271 PFYFsSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLG 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 887513769 312 S----MIHNLSDSQD-IRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSK 359
Cdd:CHL00049 349 TfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
151-397 |
1.66e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 40.72 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 151 ISIAWMLNFGSWNYINYYYFIFDSFEMKIITMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 230
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 231 FSPMLltynYGWMLMLIGCMTMFMAGLGANFEFDLSKVIALSTLSQLGLMMSILSMGyyvlAFFHMLTHALFkaLLFMCA 310
Cdd:MTH00200 145 LAPAL----NSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS----PNLALLYLLLY--VIITLT 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 311 GSMIHNLSDSQDIRFMGSIVNFMPLTSMCFNVSSLSLCGMPFLVGFYSKDLILevvclswVNSLIFLLFFLSTGLTASYS 390
Cdd:MTH00200 215 VFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
....*..
gi 887513769 391 FRLFYYS 397
Cdd:MTH00200 288 LSLFFYL 294
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
181-364 |
2.44e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 40.19 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 181 TMLIIIASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLLTYnygwMLMLIGCMTMFMAGLGAN 260
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513769 261 FEFDLSKVIALSTLSQLGLMMSILSMGYYvLAFFHMLTHALFKALLFMcagsmIHNLSDSQDIRFMGSIVNFMPLTSMCF 340
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYSPK-LTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....
gi 887513769 341 NVSSLSLCGMPFLVGFYSKDLILE 364
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
46-85 |
5.01e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 35.10 E-value: 5.01e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 887513769 46 MTFIFDWMSLIFMSFVMYISSLVIYYSNDYMYNESNINRF 85
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| |
