|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-115 |
1.51e-72 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 219.65 E-value: 1.51e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00156 157 GFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLIN 236
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00156 237 PYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAIL 271
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-115 |
7.23e-31 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 112.58 E-value: 7.23e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFH-FILPFIVMAMVIIHLLFLHQTGSSNPLG----LNSNFDKIPFHPFFSFKDLFGFIMMIMLLTM 75
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 962094055 76 LCLIFPYNlgDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:COG1290 258 LAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGIL 295
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
41-115 |
2.92e-23 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 87.32 E-value: 2.92e-23
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 962094055 41 NPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIFPYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAIL 75
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-87 |
5.80e-17 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 71.89 E-value: 5.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHF-ILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLI 79
Cdd:pfam13631 82 GPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQI 161
|
....*...
gi 962094055 80 FPYNLGDP 87
Cdd:pfam13631 162 NPIWLGGP 169
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-115 |
1.51e-72 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 219.65 E-value: 1.51e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00156 157 GFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLIN 236
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00156 237 PYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAIL 271
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-115 |
3.16e-65 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 201.67 E-value: 3.16e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00145 168 GFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFF 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00145 248 PNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-115 |
4.06e-64 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 198.72 E-value: 4.06e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00131 167 GFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFS 246
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00131 247 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-115 |
1.97e-63 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 196.83 E-value: 1.97e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00074 168 GFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFS 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00074 248 PNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-115 |
7.57e-63 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 195.51 E-value: 7.57e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00119 168 GFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFS 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00119 248 PNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-115 |
5.49e-61 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 190.13 E-value: 5.49e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00191 164 GFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFS 243
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00191 244 PNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAIL 278
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-115 |
2.03e-60 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 189.12 E-value: 2.03e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00016 168 GFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLW 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00016 248 PNILGDPENFIPANPLVTPTHIKPEWYFLWAYAIL 282
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-115 |
3.48e-60 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 188.69 E-value: 3.48e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00100 167 GFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFS 246
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00100 247 PDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-115 |
5.09e-56 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 177.98 E-value: 5.09e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00034 167 GFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLF 246
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00034 247 PTALNDPENFIPANPLVTPPHIQPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-115 |
5.63e-49 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 159.70 E-value: 5.63e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00224 168 GFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFE 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00224 248 PNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAIL 282
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-115 |
1.65e-46 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 153.32 E-value: 1.65e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00053 168 GFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLF 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00053 248 PYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-115 |
2.93e-45 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 150.24 E-value: 2.93e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIF 80
Cdd:MTH00022 166 GFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFA 245
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00022 246 PNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAIL 280
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-115 |
1.56e-36 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 126.98 E-value: 1.56e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFImMIMLLTMLCLIF 80
Cdd:MTH00086 156 GFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFY 234
|
90 100 110
....*....|....*....|....*....|....*
gi 962094055 81 PYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00086 235 PFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAIL 269
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-115 |
1.19e-32 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 117.35 E-value: 1.19e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCL-- 78
Cdd:MTH00033 164 GFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIep 243
|
90 100 110
....*....|....*....|....*....|....*..
gi 962094055 79 IFPYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00033 244 RIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAIL 280
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-115 |
7.23e-31 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 112.58 E-value: 7.23e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFH-FILPFIVMAMVIIHLLFLHQTGSSNPLG----LNSNFDKIPFHPFFSFKDLFGFIMMIMLLTM 75
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 962094055 76 LCLIFPYNlgDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:COG1290 258 LAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGIL 295
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-115 |
2.48e-29 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 107.76 E-value: 2.48e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNF-DKIPFHPFFSFKDLFGFIMMIMLLTMLCLI 79
Cdd:MTH00046 158 GFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFV 237
|
90 100 110
....*....|....*....|....*....|....*.
gi 962094055 80 FPYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00046 238 SPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAML 273
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
41-115 |
2.92e-23 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 87.32 E-value: 2.92e-23
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 962094055 41 NPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLIFPYNLGDPDNFIPANPLVTPIHIQPEWYFLFAYAIL 115
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAIL 75
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-87 |
5.80e-17 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 71.89 E-value: 5.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHF-ILPFIVMAMVIIHLLFLHQTGSSNPLGLNSNFDKIPFHPFFSFKDLFGFIMMIMLLTMLCLI 79
Cdd:pfam13631 82 GPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQI 161
|
....*...
gi 962094055 80 FPYNLGDP 87
Cdd:pfam13631 162 NPIWLGGP 169
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-40 |
2.07e-10 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 55.07 E-value: 2.07e-10
10 20 30 40
....*....|....*....|....*....|....*....|
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTGSS 40
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
92-115 |
1.53e-09 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 50.94 E-value: 1.53e-09
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-38 |
5.05e-08 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 48.53 E-value: 5.05e-08
10 20 30
....*....|....*....|....*....|....*...
gi 962094055 1 GFAVDNATLSRFFTFHFILPFIVMAMVIIHLLFLHQTG 38
Cdd:pfam00033 152 SFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
|