|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-115 |
8.50e-63 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 194.62 E-value: 8.50e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00156 157 GFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLIN 236
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00156 237 PYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAIL 271
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-115 |
4.46e-30 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 110.27 E-value: 4.46e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFM-LPFIISAFIMIHLLFLHQTGSSNPLGIKL----NSDKIPFHPFFSFKDVIGFIILLstLIY 75
Cdd:COG1290 178 GEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERkkteKVDGVPFHPYYTVKDGFGFFVFL--GVF 255
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 962094071 76 LSLLYPYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:COG1290 256 ALLAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGIL 295
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
41-115 |
3.72e-19 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 76.92 E-value: 3.72e-19
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 962094071 41 NPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLYPYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAIL 75
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-70 |
1.09e-13 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 63.41 E-value: 1.09e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 962094071 1 GFAVDNATLSRFFTFHFM-LPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILL 70
Cdd:pfam13631 82 GPFPGTATIPRFYALHILlLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITV 152
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-115 |
8.50e-63 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 194.62 E-value: 8.50e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00156 157 GFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLIN 236
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00156 237 PYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAIL 271
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-115 |
8.93e-58 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 182.54 E-value: 8.93e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00131 167 GFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFS 246
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00131 247 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-115 |
1.07e-56 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 179.34 E-value: 1.07e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00191 164 GFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFS 243
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00191 244 PNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAIL 278
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-115 |
2.22e-56 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 178.95 E-value: 2.22e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00145 168 GFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFF 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00145 248 PNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-115 |
1.11e-55 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 177.02 E-value: 1.11e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00119 168 GFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFS 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00119 248 PNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-115 |
4.19e-55 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 175.64 E-value: 4.19e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00074 168 GFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFS 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00074 248 PNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-115 |
1.16e-54 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 174.48 E-value: 1.16e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00016 168 GFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLW 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00016 248 PNILGDPENFIPANPLVTPTHIKPEWYFLWAYAIL 282
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-115 |
7.21e-54 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 172.52 E-value: 7.21e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00100 167 GFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFS 246
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00100 247 PDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-115 |
2.05e-50 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 163.34 E-value: 2.05e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00034 167 GFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLF 246
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00034 247 PTALNDPENFIPANPLVTPPHIQPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-115 |
5.37e-44 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 146.99 E-value: 5.37e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00224 168 GFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFE 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00224 248 PNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAIL 282
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-115 |
5.63e-40 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 136.37 E-value: 5.63e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00022 166 GFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFA 245
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00022 246 PNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAIL 280
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-115 |
1.04e-39 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 135.60 E-value: 1.04e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLY 80
Cdd:MTH00053 168 GFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLF 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00053 248 PYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-115 |
1.81e-32 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 116.58 E-value: 1.81e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLL- 79
Cdd:MTH00033 164 GFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEp 243
|
90 100 110
....*....|....*....|....*....|....*..
gi 962094071 80 -YPYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00033 244 rIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAIL 280
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-115 |
7.96e-31 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 111.96 E-value: 7.96e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILLsTLIYLSLLY 80
Cdd:MTH00086 156 GFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFY 234
|
90 100 110
....*....|....*....|....*....|....*
gi 962094071 81 PYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00086 235 PFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAIL 269
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-115 |
4.46e-30 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 110.27 E-value: 4.46e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFM-LPFIISAFIMIHLLFLHQTGSSNPLGIKL----NSDKIPFHPFFSFKDVIGFIILLstLIY 75
Cdd:COG1290 178 GEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERkkteKVDGVPFHPYYTVKDGFGFFVFL--GVF 255
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 962094071 76 LSLLYPYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:COG1290 256 ALLAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGIL 295
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-115 |
1.18e-25 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 98.13 E-value: 1.18e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSSNPLGIKLN-SDKIPFHPFFSFKDVIGFIILLSTLIYLSLL 79
Cdd:MTH00046 158 GFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFV 237
|
90 100 110
....*....|....*....|....*....|....*.
gi 962094071 80 YPYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:MTH00046 238 SPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAML 273
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
41-115 |
3.72e-19 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 76.92 E-value: 3.72e-19
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 962094071 41 NPLGIKLNSDKIPFHPFFSFKDVIGFIILLSTLIYLSLLYPYLLGDPDNFIPANPMVTPIHIQPEWYFLFAYAIL 115
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAIL 75
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-70 |
1.09e-13 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 63.41 E-value: 1.09e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 962094071 1 GFAVDNATLSRFFTFHFM-LPFIISAFIMIHLLFLHQTGSSNPLGIKLNSDKIPFHPFFSFKDVIGFIILL 70
Cdd:pfam13631 82 GPFPGTATIPRFYALHILlLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITV 152
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-40 |
1.99e-10 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 55.07 E-value: 1.99e-10
10 20 30 40
....*....|....*....|....*....|....*....|
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTGSS 40
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
92-115 |
3.48e-10 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 52.48 E-value: 3.48e-10
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-38 |
5.45e-09 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 51.23 E-value: 5.45e-09
10 20 30
....*....|....*....|....*....|....*...
gi 962094071 1 GFAVDNATLSRFFTFHFMLPFIISAFIMIHLLFLHQTG 38
Cdd:pfam00033 152 SFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
|