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Conserved domains on  [gi|1025726855|gb|ANC56323|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Propithecus perrieri]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 7.92e-68

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 199.40  E-value: 7.92e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1025726855  81 TINLNLTLTVALLLISVLAAGLAYEWSQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 7.92e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 199.40  E-value: 7.92e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1025726855  81 TINLNLTLTVALLLISVLAAGLAYEWSQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 8.04e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 102.50  E-value: 8.04e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855  18 VVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNLT-LTVALLLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1025726855  97 VLAAGLAYEWSQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-113 1.48e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 84.79  E-value: 1.48e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855  11 ITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNLT-LT 89
Cdd:COG0838    16 LGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFgLI 93

                          90       100
                  ....*....|....*....|....
gi 1025726855  90 VALLLISVLAAGLAYEWSQKGLEW 113
Cdd:COG0838    94 EMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 7.92e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 199.40  E-value: 7.92e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1025726855  81 TINLNLTLTVALLLISVLAAGLAYEWSQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 3.43e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 144.68  E-value: 3.43e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLT-LMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136    1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1025726855  80 QTINLNLTLTVALLLISVLAAGLAYEWSQKGLEWEE 115
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 5-115 1.48e-43

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 137.82  E-value: 1.48e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   5 LTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTINL 84
Cdd:MTH00069    4 LMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTP 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1025726855  85 NLTLTVALLLISVLAAGLAYEWSQKGLEWEE 115
Cdd:MTH00069   84 TNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 1.98e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 135.01  E-value: 1.98e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1025726855  81 TINLNLTLTVALLLISVLAAGLAYEWSQKGLEW 113
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 8.62e-37

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 120.86  E-value: 8.62e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1025726855  81 TINLNLTLTVALLLISVLAAGLAYEWSQKGLEWEE 115
Cdd:MTH00042   82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-113 1.93e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 107.29  E-value: 1.93e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   3 LSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTi 82
Cdd:MTH00203    4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQL- 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1025726855  83 nLNLTLTVALLLISVLAAGLAYEWSQKGLEW 113
Cdd:MTH00203   83 -SSLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 8.04e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 102.50  E-value: 8.04e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855  18 VVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNLT-LTVALLLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1025726855  97 VLAAGLAYEWSQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 3.45e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 91.46  E-value: 3.45e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLTLMIDITLALLLVVIAFWLPQLNIY-TEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1025726855  80 QTINLNLTLTVALLLISVLAAGLAYEWSQKGLEWEE 115
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 2-113 8.17e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 90.22  E-value: 8.17e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   2 NLSLTLMIDITLALLLVVIAFWLPQLNIY-TEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMdREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1025726855  81 TINLNLTLTVALLLISVLAAGLAYEWSQKGLEW 113
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 5-114 6.04e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 85.92  E-value: 6.04e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   5 LTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTINL 84
Cdd:MTH00055   10 ILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGL 89

                          90       100       110
                  ....*....|....*....|....*....|
gi 1025726855  85 NLTLTVALLLIsVLAAGLAYEWSQKGLEWE 114
Cdd:MTH00055   90 FGFWVMYLFLI-ILTIGLIYEWVKGGLEWE 118
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-113 1.48e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 84.79  E-value: 1.48e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855  11 ITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNLT-LT 89
Cdd:COG0838    16 LGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFgLI 93

                          90       100
                  ....*....|....*....|....
gi 1025726855  90 VALLLISVLAAGLAYEWSQKGLEW 113
Cdd:COG0838    94 EMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-113 1.70e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 84.66  E-value: 1.70e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLTLMIDITLALLLVVIAFWLP-QLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00202    2 LLILFMSILSILISSLLFLVSWMLSfRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVL 81

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1025726855  80 QTINLNLTLTVALLLISVLAAGLAYEWSQKGLEW 113
Cdd:MTH00202   82 KSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 4-113 3.57e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 78.75  E-value: 3.57e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   4 SLTLMIDITLALLLVVIAFWLPQLNIYT-EKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTI 82
Cdd:MTH00012    5 MIPMMISLILPPLVLGAAWVLAARSTADrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTS 84

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1025726855  83 NLNLTLTVALLLISVLAAGLAYEWSQKGLEW 113
Cdd:MTH00012   85 TSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-114 4.32e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.37  E-value: 4.32e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   7 LMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTINLnL 86
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGW-L 93

                          90       100
                  ....*....|....*....|....*...
gi 1025726855  87 TLTVALLLISVLAAGLAYEWSQKGLEWE 114
Cdd:PRK06602   94 GFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-114 3.89e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 75.87  E-value: 3.89e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1025726855  81 TINLNLTLTVALLLIsVLAAGLAYEWSQKGLEWE 114
Cdd:MTH00018   81 QIAPFGFWTMVGFLF-ILTLGLIYEWIKGGLEWE 113
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 8-114 2.65e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 71.50  E-value: 2.65e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   8 MIDITLALLLVVIAFWLPQLNIY-----TEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTI 82
Cdd:MTH00030   13 LLGVGIILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQL 92

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1025726855  83 NLnLTLTVALLLISVLAAGLAYEWSQKGLEWE 114
Cdd:MTH00030   93 NL-FSFWIVYTFLIVLAIGLAYEWIKGGLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-113 4.18e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 55.38  E-value: 4.18e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   7 LMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNL 86
Cdd:CHL00022   14 LIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91

                          90       100
                  ....*....|....*....|....*...
gi 1025726855  87 TLTV-ALLLISVLAAGLAYEWSQKGLEW 113
Cdd:CHL00022   92 SAFIeALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 3.97e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 52.75  E-value: 3.97e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855  33 KYSSYECGFDPMESARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQTINLNLTLTVALLL-ISVLAAGLAYEWSQK 109
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALfMLTVFVAYAYVWRRG 114


                  ....*
gi 1025726855 110 GLEWE 114
Cdd:PRK07928  115 GLEWD 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
7-113 1.41e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 51.67  E-value: 1.41e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   7 LMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNL 86
Cdd:PRK07756   16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFL--YPWAVAYDKLGL 93

                          90       100
                  ....*....|....*....|....*...
gi 1025726855  87 -TLTVALLLISVLAAGLAYEWSQKGLEW 113
Cdd:PRK07756   94 fALIEMLIFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-113 1.65e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 43.34  E-value: 1.65e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   1 MNLSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLpwasq 80
Cdd:MTH00092    2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----- 76

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1025726855  81 TINLNLTLTVALLLISVLAAGLAYEWSQKGLEW 113
Cdd:MTH00092   77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
33-114 4.28e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 42.35  E-value: 4.28e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855  33 KYSSYECGFDPMESARlPFSMKFFLVAITFLLFDLEIALLlpLPWASQTINLNL-TLTVALLLISVLAAGLAYEWSQKGL 111
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLfGLIEMLLFIVLLTIGFIYAWKKGAL 123


                  ...
gi 1025726855 112 EWE 114
Cdd:PRK08489  124 EWQ 126
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-76 2.20e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.57  E-value: 2.20e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1025726855  34 YSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060   38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 3-104 7.93e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 36.51  E-value: 7.93e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1025726855   3 LSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTI 82
Cdd:PRK06073   10 FGLVIVLGLAAGVGTYKLLKLILPSKPTPLKVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLIAFAPYYT 89

                          90       100
                  ....*....|....*....|..
gi 1025726855  83 NLNLTLTVALLLIsVLAAGLAY 104
Cdd:PRK06073   90 FRDLLLLIVVALV-LMYPVLYY 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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