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ORF1 [Isavirus salaris]
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
CbiD super family | cl00828 | CbiD; CbiD is essential for cobalamin biosynthesis in both S. typhimurium and B. megaterium, ... |
18-71 | 8.31e-05 | ||
CbiD; CbiD is essential for cobalamin biosynthesis in both S. typhimurium and B. megaterium, no functional role has been ascribed to the protein. The CbiD protein has a putative S-AdoMet binding site. It is possible that CbiD might have the same role as CobF in undertaking the C-1 methylation and deacylation reactions required during the ring contraction process. The actual alignment was detected with superfamily member PRK00075: Pssm-ID: 469945 Cd Length: 361 Bit Score: 42.12 E-value: 8.31e-05
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Name | Accession | Description | Interval | E-value | ||
cbiD | PRK00075 | cobalt-precorrin-6A synthase; Reviewed |
18-71 | 8.31e-05 | ||
cobalt-precorrin-6A synthase; Reviewed Pssm-ID: 234615 Cd Length: 361 Bit Score: 42.12 E-value: 8.31e-05
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CbiD | COG1903 | Cobalamin biosynthesis protein CbiD (cobalt-precorrin-5B C-methyltransferase) [Coenzyme ... |
18-71 | 2.94e-04 | ||
Cobalamin biosynthesis protein CbiD (cobalt-precorrin-5B C-methyltransferase) [Coenzyme transport and metabolism]; Cobalamin biosynthesis protein CbiD (cobalt-precorrin-5B C-methyltransferase) is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis Pssm-ID: 441507 [Multi-domain] Cd Length: 368 Bit Score: 40.48 E-value: 2.94e-04
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CbiD | pfam01888 | CbiD; CbiD is essential for cobalamin biosynthesis in both S. typhimurium and B. megaterium, ... |
18-71 | 1.07e-03 | ||
CbiD; CbiD is essential for cobalamin biosynthesis in both S. typhimurium and B. megaterium, no functional role has been ascribed to the protein. The CbiD protein has a putative S-AdoMet binding site. It is possible that CbiD might have the same role as CobF in undertaking the C-1 methylation and deacylation reactions required during the ring contraction process. Pssm-ID: 460373 Cd Length: 258 Bit Score: 38.53 E-value: 1.07e-03
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cbiD | TIGR00312 | cobalamin biosynthesis protein CbiD; This protein has been shown by cloning into E. coli to be ... |
18-71 | 2.82e-03 | ||
cobalamin biosynthesis protein CbiD; This protein has been shown by cloning into E. coli to be required for cobalamin biosynthesis. role_id [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin] Pssm-ID: 273008 Cd Length: 347 Bit Score: 37.55 E-value: 2.82e-03
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Name | Accession | Description | Interval | E-value | ||
cbiD | PRK00075 | cobalt-precorrin-6A synthase; Reviewed |
18-71 | 8.31e-05 | ||
cobalt-precorrin-6A synthase; Reviewed Pssm-ID: 234615 Cd Length: 361 Bit Score: 42.12 E-value: 8.31e-05
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CbiD | COG1903 | Cobalamin biosynthesis protein CbiD (cobalt-precorrin-5B C-methyltransferase) [Coenzyme ... |
18-71 | 2.94e-04 | ||
Cobalamin biosynthesis protein CbiD (cobalt-precorrin-5B C-methyltransferase) [Coenzyme transport and metabolism]; Cobalamin biosynthesis protein CbiD (cobalt-precorrin-5B C-methyltransferase) is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis Pssm-ID: 441507 [Multi-domain] Cd Length: 368 Bit Score: 40.48 E-value: 2.94e-04
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CbiD | pfam01888 | CbiD; CbiD is essential for cobalamin biosynthesis in both S. typhimurium and B. megaterium, ... |
18-71 | 1.07e-03 | ||
CbiD; CbiD is essential for cobalamin biosynthesis in both S. typhimurium and B. megaterium, no functional role has been ascribed to the protein. The CbiD protein has a putative S-AdoMet binding site. It is possible that CbiD might have the same role as CobF in undertaking the C-1 methylation and deacylation reactions required during the ring contraction process. Pssm-ID: 460373 Cd Length: 258 Bit Score: 38.53 E-value: 1.07e-03
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cbiD | TIGR00312 | cobalamin biosynthesis protein CbiD; This protein has been shown by cloning into E. coli to be ... |
18-71 | 2.82e-03 | ||
cobalamin biosynthesis protein CbiD; This protein has been shown by cloning into E. coli to be required for cobalamin biosynthesis. role_id [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin] Pssm-ID: 273008 Cd Length: 347 Bit Score: 37.55 E-value: 2.82e-03
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Blast search parameters | ||||
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