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Conserved domains on  [gi|1103528775|gb|APD14935|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Tridactylus sp. NS-2016]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 2.22e-134

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 383.35  E-value: 2.22e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   6 MFCFFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMG 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 166 GYSLIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1103528775 246 SLFFLGGDFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 2.22e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 383.35  E-value: 2.22e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   6 MFCFFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMG 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 166 GYSLIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1103528775 246 SLFFLGGDFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
17-303 4.21e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 288.60  E-value: 4.21e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  17 MVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  97 PFFSFL--LGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSLIEFKV 174
Cdd:pfam00146  86 PFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVE 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 175 NQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFFLGG-- 252
Cdd:pfam00146 166 AQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwl 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1103528775 253 ----DFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMV 303
Cdd:pfam00146 246 gpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 17-311 3.96e-92

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 276.63  E-value: 3.96e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  17 MVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:COG1005    19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  97 PFFSFLLG--FKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSLIEFKV 174
Cdd:COG1005    99 PFGPGLVLadLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVE 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 175 NQE-FIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFFLGGD 253
Cdd:COG1005   179 AQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGW 258

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 254 FCSFM------------FFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:COG1005   259 LGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLLF 328
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
20-311 4.19e-45

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 156.02  E-value: 4.19e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  20 VLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIALSVWLVFPFF 99
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPFG 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 100 SFLL-GFKY---------GFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSL 169
Cdd:NF040610  103 AVIInGVEYplvvtnmdiSILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 170 IEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFF 249
Cdd:NF040610  183 VEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1103528775 250 LGG-------------DFCSFM--FFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:NF040610  263 LGGwnlpgfvtdipvlGIILPTlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLYL 339
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 2.22e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 383.35  E-value: 2.22e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   6 MFCFFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMG 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 166 GYSLIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1103528775 246 SLFFLGGDFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-308 5.64e-124

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 356.87  E-value: 5.64e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   7 FCFFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  87 IIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGG 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 167 YSLIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLIS 246
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1103528775 247 LFFLGGDF-----CSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVV 308
Cdd:MTH00143  241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 9-301 6.13e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 354.34  E-value: 6.13e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   9 FFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLII 88
Cdd:MTH00225    3 FLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLIL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  89 ALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYS 168
Cdd:MTH00225   83 SLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYN 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 169 LIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLF 248
Cdd:MTH00225  163 LFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSIL 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1103528775 249 FLGGDF--CSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFL 301
Cdd:MTH00225  243 FFGGFFvtIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYL 297
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 10-311 9.15e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 321.09  E-value: 9.15e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  10 FISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIA 89
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  90 LSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSL 169
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 170 IEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFF 249
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1103528775 250 LGGDFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-302 9.58e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 316.18  E-value: 9.58e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   6 MFCFFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMG 85
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVG 165
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 166 GYSLIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLI 245
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1103528775 246 SLFFLGGDFCSFM-------FFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLM 302
Cdd:MTH00071  244 TILFLGSTYNHLQpelstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTI 307
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 9-302 1.09e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 313.48  E-value: 1.09e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   9 FFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLII 88
Cdd:MTH00104    2 FMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  89 ALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYS 168
Cdd:MTH00104   82 ALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFT 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 169 LIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLF 248
Cdd:MTH00104  162 LSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTIL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1103528775 249 FLGGDFCSFM-------FFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLM 302
Cdd:MTH00104  242 FLGAFHNPYMpelyttnFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 11-298 2.44e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 312.60  E-value: 2.44e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  11 ISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIAL 90
Cdd:MTH00111    9 INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLAL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  91 SVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSLI 170
Cdd:MTH00111   89 TIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQ 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 171 EFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFFL 250
Cdd:MTH00111  169 TLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFL 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1103528775 251 GGDFCSFM-------FFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISL 298
Cdd:MTH00111  249 NPSTLNLPpelftinLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 2-302 5.12e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 311.93  E-value: 5.12e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   2 LLKEMFCFFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFS 81
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  82 PIMGLIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVM 161
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 162 LFVGGYSLIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMM 241
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1103528775 242 SMLISLFFLGG-------DFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLM 302
Cdd:MTH00134  241 NTLSAILFLGAshiptlpELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVI 308
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 11-311 8.80e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 310.91  E-value: 8.80e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  11 ISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIAL 90
Cdd:MTH00195    6 IHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALAL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  91 SVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSLI 170
Cdd:MTH00195   86 ILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFT 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 171 EFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFFL 250
Cdd:MTH00195  166 IMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFL 245

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1103528775 251 GGDfCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:MTH00195  246 GGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 9-303 1.02e-98

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 292.84  E-value: 1.02e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   9 FFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLII 88
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  89 ALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYS 168
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 169 LIEFKVNQEFiWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLF 248
Cdd:MTH00010  165 FSKIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1103528775 249 FLG----GDFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMV 303
Cdd:MTH00010  244 FTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMI 302
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 7-311 2.50e-98

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 292.26  E-value: 2.50e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   7 FCFFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGL 86
Cdd:MTH00040    4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  87 IIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGG 166
Cdd:MTH00040   84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 167 YSLIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLIS 246
Cdd:MTH00040  164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1103528775 247 LFFLGGD--------FCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:MTH00040  244 ILFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
17-303 4.21e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 288.60  E-value: 4.21e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  17 MVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  97 PFFSFL--LGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSLIEFKV 174
Cdd:pfam00146  86 PFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVE 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 175 NQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFFLGG-- 252
Cdd:pfam00146 166 AQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwl 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1103528775 253 ----DFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMV 303
Cdd:pfam00146 246 gpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 17-311 3.96e-92

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 276.63  E-value: 3.96e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  17 MVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:COG1005    19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  97 PFFSFLLG--FKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSLIEFKV 174
Cdd:COG1005    99 PFGPGLVLadLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVE 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 175 NQE-FIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFFLGGD 253
Cdd:COG1005   179 AQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGW 258

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 254 FCSFM------------FFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:COG1005   259 LGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLLF 328
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-309 7.90e-89

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 268.13  E-value: 7.90e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   6 MFCFFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMG 85
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  86 LIIALSVWLVFPFFS--FLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLF 163
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 164 VGGYSLIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSM 243
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1103528775 244 LISLFFLGGDFCSF----------MFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVL 309
Cdd:MTH00054  241 FGVILFLGGWLVISgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
17-307 1.94e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 262.05  E-value: 1.94e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  17 MVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:PRK06076   20 LVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVI 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  97 PFFSFLL--GFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSLIEFKV 174
Cdd:PRK06076  100 PFGPELViaDLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVE 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 175 NQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFFLGG-- 252
Cdd:PRK06076  180 AQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGwl 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1103528775 253 --------DFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGV 307
Cdd:PRK06076  260 ppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-309 4.96e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 258.51  E-value: 4.96e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   2 LLKEMFCFFISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFS 81
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  82 PIMGLIIALSVWLVFPFFSFLL--GFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILV 159
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 160 VMLFVGGYSLIEFKVNQ-EFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMI 238
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1103528775 239 LMMSMLISLFFLGG--------DFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVL 309
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLF 319
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 11-309 3.57e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 231.44  E-value: 3.57e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  11 ISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIAL 90
Cdd:MTH00029   11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  91 SVWLVFPFFS--FLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYS 168
Cdd:MTH00029   91 LAWAIVTMDQgvFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 169 LIEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLF 248
Cdd:MTH00029  171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 249 FLGG-----------------------DFCSFMFFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGV 305
Cdd:MTH00029  251 FLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330


                  ....
gi 1103528775 306 GVVL 309
Cdd:MTH00029  331 GILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 17-302 1.05e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 197.43  E-value: 1.05e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  17 MVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:MTH00090    6 MIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  97 PFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSLIEFKVNQ 176
Cdd:MTH00090   86 PYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSFSLS 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 177 EFIwfvfvvfpLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFFLggDFCS 256
Cdd:MTH00090  166 LFV--------IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF--KFSF 235

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1103528775 257 FMFFLKLVFMsffyIWARGTLPRYRYDKLMGLAWKSFLPISLGFLM 302
Cdd:MTH00090  236 LMLFLIFSLL----IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLG 277
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 10-303 1.99e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 173.96  E-value: 1.99e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  10 FISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIA 89
Cdd:MTH00058    4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  90 LSVWLVFPFFSFLLGFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSL 169
Cdd:MTH00058   84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 170 IEFkvNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFF 249
Cdd:MTH00058  164 VDF--YYSGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLF 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1103528775 250 LGGDFCSFMfflkLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMV 303
Cdd:MTH00058  242 FGGGFVSIM----LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFV 291
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
20-311 4.19e-45

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 156.02  E-value: 4.19e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  20 VLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMYYFSPIMGLIIALSVWLVFPFF 99
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPFG 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 100 SFLL-GFKY---------GFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSL 169
Cdd:NF040610  103 AVIInGVEYplvvtnmdiSILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 170 IEFKVNQEFIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFF 249
Cdd:NF040610  183 VEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1103528775 250 LGG-------------DFCSFM--FFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMVGVGVVLFI 311
Cdd:NF040610  263 LGGwnlpgfvtdipvlGIILPTlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLYL 339
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-302 1.01e-39

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 142.78  E-value: 1.01e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775   2 LLKEMFCF---FISYFTTMVCVLVSIAFLTLLERKGLGYIQFRKGPNKVGLMGVLQPFSDAIKLFSSEQTFPVLSNYMMY 78
Cdd:CHL00032   19 SLKEVYGLiwiLVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLF 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  79 YFSPIMGLIIALSVWLVFPFFSFLL--GFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLI 156
Cdd:CHL00032   99 SIGPSIAVISILLSYLVIPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 157 ILVVMLFVGGYSLIEFKVNQE----FIWFVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFL 232
Cdd:CHL00032  179 VLSISLLSNSLSTVDIVEAQSkygfWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYV 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 233 AEYGMILMMSMLISLFFLGGDFCS--FMFFLKLVFMS-----------------------FFYIWARGTLPRYRYDKLMG 287
Cdd:CHL00032  259 ASYLNLLVSSLFVTVLYLGGWNLSipYIFIPELFEINktggvfgttigifitlaktylflFISITTRWTLPRLRMDQLLN 338

                         330
                  ....*....|....*
gi 1103528775 288 LAWKSFLPISLGFLM 302
Cdd:CHL00032  339 LGWKFLLPISLGNLL 353
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
26-303 7.43e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 104.11  E-value: 7.43e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775  26 FLTLLERKGLGYIQFRKGPnkvglmGVLQPFSDAIKLFSSEQTFPVLSNyMMYYFSPIMGLIIALSVWLVFPFFSF--LL 103
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLAALLVPVLTTgpPL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 104 GFKYGFLFFLCLSSLGVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLIILVVMLFVGGYSL---IEFKVNQEFIW 180
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLsdiVAYQAAHGPLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528775 181 FVFVVFPLFFMWVISCLAESNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYGMILMMSMLISLFFLGGDFCSFM-- 258
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALTLll 252

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1103528775 259 ----FFLKLVFMSFFYIWARGTLPRYRYDKLMGLAWKSFLPISLGFLMV 303
Cdd:COG0650   253 alllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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