|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-446 |
1.12e-131 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 387.20 E-value: 1.12e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 1 MLSFLGLLIFSMPLIFFGFwSWWIIQSVFFLMGGFLMMNFIFTVGFSSISYFGGVDNLGLGLILLSIWICSLMIMSSSSI 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKN-SWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 81 YFNKVYVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLF 160
Cdd:MTH00163 80 YKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 161 YIYVSSGSLYLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLT 240
Cdd:MTH00163 160 YLYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 241 KMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLAN 320
Cdd:MTH00163 240 KLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLAN 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 321 ISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLY 400
Cdd:MTH00163 320 IIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLY 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1143273021 401 SFSQHGKMYSGLGACSGGLMREYLLLILHWLPLNLLVLSGSFWICW 446
Cdd:MTH00163 400 SYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-445 |
9.20e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 310.76 E-value: 9.20e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 2 LSFLGLLIFSMPLIFFGFWSWWIIQSVFFLMGGFLMMNFI-FTVGFSSISYFGGVDNLGLGLILLSIWICSLMIMSSSSI 80
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSnSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 81 YFNKVYVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLF 160
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 161 YIYVSSGSL---YLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYF 237
Cdd:MTH00205 161 FLNSLNFSLsmfFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 238 MLTKMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFC 317
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 318 LANISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSL 397
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1143273021 398 YLYSFSQHGKMYSGLGACSGGLMREYLLLILHWLPLNLLVLSGSFWIC 445
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-447 |
1.30e-97 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 300.12 E-value: 1.30e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 1 MLSFLGLLIFSMPLIFFGFWSWW--IIQSVFFLMGGFLMMNFIFTVGFSSISYFGGVDNLGLGLILLSIWICSLMIMSSS 78
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWalTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 79 SIYFNKVYVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVG 158
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 159 LFYIYVSSGSLYLGNDCLGGGDGLIS---YICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRV 235
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYLMnlwWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 236 YFMLTKMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGM 315
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 316 FCLANISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVY 395
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1143273021 396 SLYLYSFSQHGKMYSGLGACSGGLMREYLLLILHWLPLNLLVLSGSFWICWL 447
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
36-447 |
1.46e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 293.67 E-value: 1.46e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 36 LMMNFIFTVGFSSISYFGGVDNLGLGLILLSIWICSLMIMSSSSIYFNKVYVKVFLGLIIFLLMMLICAFISMDYFSFYI 115
Cdd:MTH00150 3 LLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 116 FFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGS---LYLGNDCLGGGDGLISYICLILAF 192
Cdd:MTH00150 83 FFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSsfmLLISSLRKLLSSMGLWGLLVFLAF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 193 LVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTKMGVLMNFFFISISLLGGVMISILCLCQSDLK 272
Cdd:MTH00150 163 LVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 273 SLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYERLGSRSLLINKGLMGFMPSMTMWWFLLI 352
Cdd:MTH00150 243 SLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFC 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 353 SSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYSFSQHGKMYSGLGACSGGLMREYLLLILHWLP 432
Cdd:MTH00150 323 IINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVP 402
|
410
....*....|....*
gi 1143273021 433 LNLLVLSGSFWICWL 447
Cdd:MTH00150 403 LLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
88-408 |
4.12e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 288.63 E-value: 4.12e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSG 167
Cdd:MTH00124 93 RTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 168 SLYL------GNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTK 241
Cdd:MTH00124 173 TLSLpmlqltHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPP 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 242 MGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANI 321
Cdd:MTH00124 253 LSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANT 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 322 SYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYS 401
Cdd:MTH00124 333 NYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFL 412
|
....*..
gi 1143273021 402 FSQHGKM 408
Cdd:MTH00124 413 STQRGTL 419
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-408 |
3.44e-86 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 271.02 E-value: 3.44e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSG 167
Cdd:MTH00068 93 RTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 168 SLYLGN-------DCLGGGDGLISYICLiLAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLT 240
Cdd:MTH00068 173 SLSLILlelmspmQLMTYTNKIWWLACL-LAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLT 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 241 KMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLAN 320
Cdd:MTH00068 252 PLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLAN 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 321 ISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLY 400
Cdd:MTH00068 332 TNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMF 411
|
....*...
gi 1143273021 401 SFSQHGKM 408
Cdd:MTH00068 412 LMTQRGPL 419
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
2-410 |
1.48e-85 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 269.15 E-value: 1.48e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 2 LSFLGLLIFSMPLIFFGFWSWWIIQSVFFLMGGFLMMNFIFTVGFSSISYFGGVDNLGLGLILLSIWIC--SLMIMSSSS 79
Cdd:MTH00044 6 LLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAplSLLASINHL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 80 IYFNKVYVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGL 159
Cdd:MTH00044 86 SNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 160 FYIYVSSGSLYLGNDCLGGGDGL------ISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLL 233
Cdd:MTH00044 166 IAIYSSSSSLSIPLSELNWLTSLssnsssIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 234 RVY-FMLTKMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCS 312
Cdd:MTH00044 246 RLInLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVS 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 313 SGMFCLANISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLS 392
Cdd:MTH00044 326 SALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFG 405
|
410
....*....|....*...
gi 1143273021 393 AVYSLYLYSFSQHGKMYS 410
Cdd:MTH00044 406 AIYSLLIYQLTNSGSFPS 423
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
88-408 |
3.93e-82 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 260.60 E-value: 3.93e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSG 167
Cdd:MTH00110 93 KLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 168 SL------YLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTK 241
Cdd:MTH00110 173 SLnflllqLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 242 MGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANI 321
Cdd:MTH00110 253 LTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANS 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 322 SYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYS 401
Cdd:MTH00110 333 NYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLI 412
|
....*..
gi 1143273021 402 FSQHGKM 408
Cdd:MTH00110 413 TTQRGKL 419
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-442 |
6.97e-80 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 254.48 E-value: 6.97e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 1 MLSFLGLLIFSMPLIFFGFWSWWIIQSVFFLMGGFLMMNFIFT--VGFSSISYFGGVDNLGLGLILLSIWICSLMIMSSS 78
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSseVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 79 SIYFNK--VYVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLL 156
Cdd:MTH00206 81 NHMKNEpiNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 157 VGLFYIYVSSGSLYL---GNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLL 233
Cdd:MTH00206 161 IALLFLQNSLGSLSLyilYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 234 RVYFMLTKMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSS 313
Cdd:MTH00206 241 RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 314 GMFCLANISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSA 393
Cdd:MTH00206 321 ALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1143273021 394 VYSLYLYSFSQHGKMYSGLGACSGGLMREYLLLILHWLPLNLLVLSGSF 442
Cdd:MTH00206 401 IYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNL 449
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
88-406 |
3.66e-78 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 250.26 E-value: 3.66e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSG 167
Cdd:MTH00127 94 RMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 168 SL------YLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTK 241
Cdd:MTH00127 174 TLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDP 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 242 MGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANI 321
Cdd:MTH00127 254 LTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANT 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 322 SYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYS 401
Cdd:MTH00127 334 NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFL 413
|
....*
gi 1143273021 402 FSQHG 406
Cdd:MTH00127 414 MTQRG 418
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
86-400 |
9.58e-50 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 176.04 E-value: 9.58e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 86 YVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYqPERLQAGVYLMFYTLFASMPLLVGLFYIYVS 165
Cdd:COG1008 109 RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 166 SGS-----LYLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLT 240
Cdd:COG1008 188 AGAltfdiAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 241 KMGVL-MNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLA 319
Cdd:COG1008 268 PEASAyFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLV 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 320 NISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYL 399
Cdd:COG1008 348 GVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWM 427
|
.
gi 1143273021 400 Y 400
Cdd:COG1008 428 Y 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-385 |
1.00e-47 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 165.56 E-value: 1.00e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 107 SMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSLYLGNDCLGGGDG----- 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 182 -LISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTKMGVLMNFFFISISLLGGVM 260
Cdd:pfam00361 81 lLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 261 ISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLA-NISYERLGSRSLLINKGLMG 339
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1143273021 340 FMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFML 385
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
84-400 |
2.04e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 167.15 E-value: 2.04e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 84 KVYVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIY 163
Cdd:MTH00217 105 KFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLY 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 164 VSSGSLYLGNDCLGGGDGLISYICLILAFL---VSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYF-ML 239
Cdd:MTH00217 185 SYAGTTDYQALCCLKIEKELQYFIFLGFFLslaIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWpLL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 240 TKMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLA 319
Cdd:MTH00217 265 PEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAV 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 320 NISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYL 399
Cdd:MTH00217 345 TFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
.
gi 1143273021 400 Y 400
Cdd:MTH00217 425 Y 425
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
84-400 |
1.43e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 162.15 E-value: 1.43e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 84 KVYVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIY 163
Cdd:MTH00204 108 KFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLY 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 164 VSSGS---LYLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRV-YFML 239
Cdd:MTH00204 188 SITGTtdyQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 240 TKMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLA 319
Cdd:MTH00204 268 PAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAV 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 320 NISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYL 399
Cdd:MTH00204 348 TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
.
gi 1143273021 400 Y 400
Cdd:MTH00204 428 Y 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
86-400 |
4.51e-41 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 152.40 E-value: 4.51e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 86 YVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGyQPERLQAGVYLMFYTLFASMPLLVGLFYIYVS 165
Cdd:TIGR01972 104 RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFL 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 166 SGSLY----LGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRvyFMLTK 241
Cdd:TIGR01972 183 GGGTFdlleLLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLR--FNLPL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 242 MGVLMNFFFISISLLGGVMI---SILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCL 318
Cdd:TIGR01972 261 FPDASLYFAPVLAALGVIAIiygALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 319 ANISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLY 398
Cdd:TIGR01972 341 VGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLT 420
|
..
gi 1143273021 399 LY 400
Cdd:TIGR01972 421 LY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
84-400 |
3.73e-39 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 147.27 E-value: 3.73e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 84 KVYVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYqPERLQAGVYLMFYTLFASMPLLVGLFYIY 163
Cdd:PRK05846 107 KKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLV 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 164 VSSGS-------LYLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLR-V 235
Cdd:PRK05846 186 VVYYNatgtfdiADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 236 YFMLTKMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGM 315
Cdd:PRK05846 266 LPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAAL 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 316 FCLANISYERLGSRSLLINKGLMGFMP--SMTMWWFLLISSSMaaPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSA 393
Cdd:PRK05846 346 FLLVGVLYDRLHTRDIADYGGLAKVMPvlAAFFLFFAMASLGL--PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAA 423
|
....*..
gi 1143273021 394 VYSLYLY 400
Cdd:PRK05846 424 VYSLWLY 430
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
84-399 |
2.11e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 145.45 E-value: 2.11e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 84 KVYVKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIY 163
Cdd:MTH00226 127 KYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLY 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 164 VSSGS-----LYLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFM 238
Cdd:MTH00226 207 NIHGTtdyltLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWP 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 239 LTKMGVL-MNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFC 317
Cdd:MTH00226 287 ILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFI 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 318 LANISYERLGSRSLLINKGLMGFMPsmtMWWFLLISSSM---AAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAV 394
Cdd:MTH00226 367 LVTILYDRHHTRLIKYYRGLSITMP---IWGTIMIVTSLanvAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAV 443
|
....*
gi 1143273021 395 YSLYL 399
Cdd:MTH00226 444 YSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
93-410 |
1.21e-32 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 127.72 E-value: 1.21e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 93 LIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYvssgsLYLG 172
Cdd:MTH00094 67 LSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNF-----FFFS 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 173 NDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRvyfMLTKMGVLMNFFFIS 252
Cdd:MTH00094 142 LCYFDFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFWII 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 253 ISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYERLGSRSLL 332
Cdd:MTH00094 219 FSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIY 298
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1143273021 333 INKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYSFSQHGKMYS 410
Cdd:MTH00094 299 FMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFS 376
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
88-404 |
7.82e-29 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 117.56 E-value: 7.82e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYqPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSG 167
Cdd:COG0651 107 RRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 168 SLYLGN-----DCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFML--T 240
Cdd:COG0651 186 TLNMADlaarlAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 241 KMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLAN 320
Cdd:COG0651 266 DPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAG 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 321 ISYERLGSRSLLINKGLMGFMPsMTMWWFLLISSSMAA-PPSLNLMGEIGLLISMV-GWSWFVMFMLMLMSFLSAVYSLY 398
Cdd:COG0651 346 AIERATGTRDLDKLGGLGKRMP-LTAAAFLIGALALAGlPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVR 424
|
....*.
gi 1143273021 399 LYSFSQ 404
Cdd:COG0651 425 IFGRAQ 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
88-366 |
1.83e-25 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 108.58 E-value: 1.83e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQpERLQAGVYLMFYTLFASMPLLVGLFYIYVSSG 167
Cdd:PRK12561 87 RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 168 SLY-----LGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYF-MLTK 241
Cdd:PRK12561 166 TFTfdlaeLGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVqMLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 242 MGVlmnFFFISISLLGGVMISILCLC---QSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCL 318
Cdd:PRK12561 246 AHV---YFAPALAILGVVNIIYGALNafaQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFL 322
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1143273021 319 ANISYERLGSRSLLINKGLMGFMPSMtmwWFLLISSSMAappSLNLMG 366
Cdd:PRK12561 323 TGVTYERTHTLSIPNMGGLAKVMPKT---FALFTASSMA---SLALPG 364
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-399 |
4.67e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 89.17 E-value: 4.67e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 90 FLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLIlGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSL 169
Cdd:PRK08375 108 FYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 170 YLG---NDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYF----MLTKM 242
Cdd:PRK08375 187 NMAdlaGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRF 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 243 GVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANIS 322
Cdd:PRK08375 267 ALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAI 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1143273021 323 YERLGSRSLLINKGLMGFMPsMTMWWFLLISSSMA-APPSLNLMGEIGLLISMVG-WSWFVMFMLMLMSFLSAVYSLYL 399
Cdd:PRK08375 347 EVTYGTRRLSELSGLGRRMP-LTAAAFAVASLSLIgVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
88-358 |
3.20e-17 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 83.60 E-value: 3.20e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQpERLQAGVYLMFYTLFASMPLLV---GLFYIYV 164
Cdd:PRK06473 107 RFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVsflGLVWLSG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 165 SSGSLY--LGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGvllklggygllrVYFMLTKM 242
Cdd:PRK06473 186 ASSFDYepLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAG------------VLLKLGTY 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 243 GVL---MNFF-----FISISLLGGVMISIL--CLC---QSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHG 309
Cdd:PRK06473 254 GLLrfgVGLFpeawvYLAPWLATWAVVSVLygASCaiaQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHG 333
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1143273021 310 LCSSGMFCLANISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAA 358
Cdd:PRK06473 334 LISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMAS 382
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
88-394 |
2.09e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 81.29 E-value: 2.09e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQpERLQAGVYLMFYTLFASMPLLVGLFYIYVSSG 167
Cdd:PRK02546 115 KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGD 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 168 SL-----YLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYF-MLTK 241
Cdd:PRK02546 194 TPtfdmtALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAgMLPD 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 242 MGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANI 321
Cdd:PRK02546 274 AHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGA 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1143273021 322 SYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAV 394
Cdd:PRK02546 354 TYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPFRVVVVFLAAV 426
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
102-366 |
9.50e-16 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 79.22 E-value: 9.50e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 102 ICAFISMDYFSFYIFFEGSLIPTILLILGWGYQpERLQAGVYLMFYTLFASMPLLVGLFYI--YVSSGSLY----LGNDC 175
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglYGSNEPTLnfetLANQS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 176 LGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVyfmltKMGVLMNFFFI---S 252
Cdd:CHL00011 205 YPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI-----NMELLPHAHSIfspW 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 253 ISLLGGVMI---SILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYERLGSR 329
Cdd:CHL00011 280 LVIVGAIQIiyaASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLV 359
|
250 260 270
....*....|....*....|....*....|....*...
gi 1143273021 330 SLLINKGLMGFMPSMtmwwFLLISS-SMAappSLNLMG 366
Cdd:CHL00011 360 YLDEMGGIAIPMPKI----FTMFSSfSMA---SLALPG 390
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
95-376 |
2.89e-14 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 74.19 E-value: 2.89e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 95 IFLLMMLICAFISM---DYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSLYL 171
Cdd:MTH00062 75 FFLFLSLIFSILCFcvnNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 172 GNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTKMGVlmnFFFI 251
Cdd:MTH00062 155 SDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYL 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 252 SISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYERLGSRSL 331
Cdd:MTH00062 232 FLCCLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNW 311
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1143273021 332 LINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVG 376
Cdd:MTH00062 312 VLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG 356
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
88-408 |
4.29e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 73.98 E-value: 4.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQpERLQAGVYLMFYTLFASMPLLVGLFYIYVSSG 167
Cdd:PRK07363 107 RLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 168 SLYLGNDC-----LGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRvyFMLTKM 242
Cdd:PRK07363 186 STSFDYDAistqnLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR--FGLQLF 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 243 GVLMNFFFISISLLGGVMI---SILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLA 319
Cdd:PRK07363 264 PQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLV 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 320 NISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVG-WSWFVMFMLM--LMSFLSAVYS 396
Cdd:PRK07363 344 GIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGsFSTFPIPTLLciVASGLTAVYF 423
|
330
....*....|..
gi 1143273021 397 LYLYSFSQHGKM 408
Cdd:PRK07363 424 VILLNRTCFGRL 435
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
90-376 |
2.96e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 62.44 E-value: 2.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 90 FLGLIIFLLMMLIcafISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSL 169
Cdd:PRK08667 116 LTALFILSMLGVV---ASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 170 YLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTKMGVLMNFF 249
Cdd:PRK08667 193 ELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 250 FISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLML-----------AHGLCSSGMFCL 318
Cdd:PRK08667 273 ILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALlalggalfhslNHALFKSLLFLT 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1143273021 319 ANISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVG 376
Cdd:PRK08667 353 AGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQ 410
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-325 |
1.67e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 59.58 E-value: 1.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 104 AFISMDYFSFYIFFEGSLIPTILLIlGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSLYLGNdcLGGGDGLI 183
Cdd:PRK07234 110 AFVCADLISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSG--LATADPEA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 184 SYIcLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTKMGVLMNFFFISISLLGgvmiSI 263
Cdd:PRK07234 187 FAL-IALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VL 261
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1143273021 264 LCLCQSDLKSLIAYSSVAHMGLVLGGIMTMnnwGFmssytLMLAHGLCSSGMFCLANISYER 325
Cdd:PRK07234 262 FALLEKDLKRMLAFSTISQLGFILAAPLVG---GL-----YALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
96-316 |
3.66e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.85 E-value: 3.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 96 FLLMMLICA---FISMDYFSFYIFFEGSLIPTILLILgWGYQPERLQAGVYLMFYTLFASMpLLVGLFYIYVSSGSL--- 169
Cdd:PRK08668 103 FALMSLAGVlgvFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFdfa 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 170 ----YLGNDClGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTKMGVL 245
Cdd:PRK08668 181 disqGLINDT-STGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLF 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 246 MNFFFIS--------ISLLGGVMI---SILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSG 314
Cdd:PRK08668 260 SEFGTYRgvplfnyiLAWLGNISIivgTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGL 339
|
..
gi 1143273021 315 MF 316
Cdd:PRK08668 340 FF 341
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-360 |
4.62e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 58.44 E-value: 4.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 86 YVKVFLGLIIFLLMMLICAfismDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVS 165
Cdd:PRK12667 115 YYTLLLGLEAGMLGILLTG----DAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYAT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 166 SGSLYLGNDCL-------------GGGDGLISYICLIL---AFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGG 229
Cdd:PRK12667 191 FGTLNMADLSAkirglsfpltgglAGNPPLALGVALALalwAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGA 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 230 YGLLRVYFML----TKMGVLMNFFFISISLLGGVMI---SILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSY 302
Cdd:PRK12667 271 YAIIRFLYTIfgisPSLIDFRAALSPILIILGAVSAiigALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAAL 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1143273021 303 TLMLAHGLCSSGMFCLANISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPP 360
Cdd:PRK12667 351 FHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPP 408
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-363 |
6.81e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 57.80 E-value: 6.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 90 FLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSL 169
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 170 ---YLGNDCLGGGDGL--ISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILaGVLLKLGGYGLLRVYFMLTKMGV 244
Cdd:PRK08376 203 nmaYLAVKMSENPTVVakIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML-LVIKQAGLYALARVLFSIYGPAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 245 LMNF------FFISISLLGGVMISILclcQSDLKSLIAYSSVAHMGLVLGGI---MTMNNWGFMSSYTLM---------L 306
Cdd:PRK08376 282 NLATvgwviiILGCLTMFVGVAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgvgLAALGDPAMASYGEIalaggiyhiV 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1143273021 307 AHGLCSSGMFCLANISYERLGSRSLLINKGLMGFMPsMTMWWFLLISSSMAAPPSLN 363
Cdd:PRK08376 359 NHALYKALLFLTAGAVIYETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-400 |
1.69e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 56.69 E-value: 1.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 182 LISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTKMGVLMNFFFISISlLGGVMI 261
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIG-LGIFSI 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 262 SILC---LCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYERLGSRSLLINKGLM 338
Cdd:PRK08676 285 AVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVF 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1143273021 339 GFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLY 400
Cdd:PRK08676 365 RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-395 |
6.71e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 54.74 E-value: 6.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 106 ISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMpLLVGLFYIYVSSGSLYLGN------DCLGGG 179
Cdd:PRK12662 128 VSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATF-YLIGIGFLYAITGTLNMGDmfliiqDLPTNR 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 180 DGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVY-------FMLTKMgvLMNFFFIS 252
Cdd:PRK12662 207 AIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanFVFTTL--PFNNVFMI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 253 ISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYERLGSRSLL 332
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLE 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1143273021 333 INKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMV-GWSWFVMFMLMLMSFLSAVY 395
Cdd:PRK12662 365 DCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIY 428
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
183-399 |
3.86e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 52.24 E-value: 3.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 183 ISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTkmGVLMNFF----FISISLLGG 258
Cdd:PRK06458 215 LAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILID--AAIGSDFpgrlLLIFGLLSV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 259 VMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYERLGSRSLLINKGLM 338
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLL 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1143273021 339 GFMPsMTMWWFLLISSSMA-APPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYL 399
Cdd:PRK06458 373 KVSP-LTGWGLMLGALAIAgMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVR 433
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-371 |
6.43e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 51.51 E-value: 6.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 87 VKVFLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLiLGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSS 166
Cdd:PRK12665 110 VSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAAT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 167 GSLYLGN-----DCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGvllklggygllrvyfMLTK 241
Cdd:PRK12665 189 GTLNMADlavrlDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAG---------------LLTK 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 242 MGVL--------------MNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLA 307
Cdd:PRK12665 254 VGVYaiirthtllfpgggLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAH 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1143273021 308 HGLCSSGMFCLANISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLL 371
Cdd:PRK12665 334 HITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
88-363 |
1.52e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 50.52 E-value: 1.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 88 KVFLGLIIFLLMMLiCAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSG 167
Cdd:PRK12646 111 RFYFYLTLFMFSMI-GIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 168 SLYLgNDCLGGGDGLISY-------ICLILAFLVSVPMFLVHLWLPSAhVEAPVAGSMILAGVLLKLGGYGLLrvyFMLT 240
Cdd:PRK12646 190 TNNI-TEILGQADHIKNHglfipmiFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLL---FRFT 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 241 KMGVLMNFFFISISLLGGVMI---SILCLCQSDLKSLIAYSSVAHMGLV-----LGGIMTMNNWGFMSS-YTLML----- 306
Cdd:PRK12646 265 PLLGLSNMYIYIVTFVGLITMlfgSITALKQWDLKGILAYSTISQLGMImamvgIGGGYAQHQQDAIASiYVFVLfaalf 344
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 307 ---AHGLCSSGMFCLANISYERLGSRSLLINKGLMGFMPSMTMwWFLLISSSMAAPPSLN 363
Cdd:PRK12646 345 hlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
94-399 |
5.57e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 48.61 E-value: 5.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 94 IIFLLMML--ICAFISMDYFSFYIFFEGSLIPTILLIlGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSLYL 171
Cdd:PRK08377 112 MLFLLLMLgaTGMIATGDIFNLFVFMEITAITAYALT-AYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 172 GNDCLGGGD-----GLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTKMGVLM 246
Cdd:PRK08377 191 AHIAQLAGTidptvAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 247 NF--FFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYE 324
Cdd:PRK08377 271 SVlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1143273021 325 RLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMV--GWSWFVMFMLMlMSFLSAVYSLYL 399
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLsaGYTWPVALVLG-ASVVEAVYYFRL 426
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-402 |
1.27e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 47.25 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 93 LIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPErLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSLYLG 172
Cdd:PRK07691 113 SVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 173 N------DCLGGGDGLISYICLILAFLVSVP--MFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLtkMGV 244
Cdd:PRK07691 192 DisvkiaELSAGQTGLITVVAILFLFVFATKagLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLF--FSH 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 245 LMNFFFISISLLGGVMISILCL---CQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANI 321
Cdd:PRK07691 270 DTSFTHYLILILALLTIIFGVIgavAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGI 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 322 SYERLGSRSLLINKGLMGFMPSMTmWWFLLISSSMAA-PPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSL--- 397
Cdd:PRK07691 350 MIKITGTTDLKKMGGLIKRYPVLG-WMFFIAALSLAGiPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSViki 428
|
....*
gi 1143273021 398 YLYSF 402
Cdd:PRK07691 429 FLKGF 433
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-215 |
4.79e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 45.61 E-value: 4.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 90 FLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGwGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSL 169
Cdd:PRK12666 111 FHALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYGLLLH-GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTL 189
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1143273021 170 YLGN-----DCLGGGD-GLISYICLIL--AFLVSVPMFLVHLWLPSAHVEA--PVA 215
Cdd:PRK12666 190 NMADlaqriAQLPAADrALLEAGAALLlvVFLIKAAMWPLNFWLPPAYAAAsaPVA 245
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
148-397 |
4.93e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.80 E-value: 4.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 148 TLFASMPLLVGLFYIYVSSG----SLYLGNDCLGGGDGLISyiclILAFLVSVPMFL------VHLWLPSAHVEA-PV-- 214
Cdd:PRK12650 168 TFFGGLTLLAAVAIAATQTGttslSGILHSDVWAEKPGLTT----VVAVLIAVAAFTksaqfpFHFWLPEAMAAItPVsa 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 215 ---AGSMILAGvllklggygllrVYFMLTKMGVL-----MNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLV 286
Cdd:PRK12650 244 flhAAAVVKAG------------IYLLLRFSPVFhdvavWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWI 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 287 LGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYERLGSRSLLINKGLMGFMPsMTMWWFLLISSSMAA-PPSLNLM 365
Cdd:PRK12650 312 VATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTIAALSMAAvPPLFGFV 390
|
250 260 270
....*....|....*....|....*....|....*...
gi 1143273021 366 GEIGLLISMV---GWSWFVMFMLM---LMSFLSAVYSL 397
Cdd:PRK12650 391 SKEGMLTAFLeapGGNAGVVLLLVgaaLGAVFTFAYSA 428
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
109-290 |
6.68e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 45.27 E-value: 6.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 109 DYFSFYIFFEGSLIPTILLILGWGyQPERLQAGV-YLMFYTLFASMpLLVGLFYIYVSSGSLYLGNdcLGGGDGLISYIC 187
Cdd:PRK12668 114 DLLTLFVFWELMAFTSTFLVWARG-TKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFGA--IAGLGGTAAWLI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 188 LIlAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVY---FMLTKMGVLMNFFfisisllgGVMISIL 264
Cdd:PRK12668 190 LI-GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFpgtELLIYIGAAMAVY--------GVFFALL 260
|
170 180
....*....|....*....|....*.
gi 1143273021 265 clcQSDLKSLIAYSSVAHMGLVLGGI 290
Cdd:PRK12668 261 ---ENDLRRLLSYHIVSQVGYMVAGI 283
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
90-397 |
7.93e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.94 E-value: 7.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 90 FLGLIIFLLMMLICAFISMDYFSFYIFFEGSLIPTILLILgWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSL 169
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 170 YLGN-----DCLGGGDGLISY-ICLILAFLVSVPMFLVHlWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFML---- 239
Cdd:PRK12663 189 NMAHiamrlNDMGDTATLTTIaLLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqe 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 240 TKMGVLMNFFFISISLLGGVMISilcLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLA 319
Cdd:PRK12663 268 RELLHPLLATMAAITMVIGALGA---LAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIA 344
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1143273021 320 NISYERLGSRSLLINKGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSL 397
Cdd:PRK12663 345 GSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-402 |
1.03e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 44.42 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 93 LIIFLLMMLICAFI--SMDYFSFYIFFEGSLIPTILLIlGWGYQPERLQAGV-YLMFYTLFASMPLLVGLFYIYVSSGSL 169
Cdd:PRK06589 119 LFFFNLTILIGVLIalSSDLFTMFVCYELLTISTAFLI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 170 YLGNDCLGGGDGLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVYFMLTKMGVLMNFF 249
Cdd:PRK06589 198 DFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIF 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 250 -----FISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMFCLANISYE 324
Cdd:PRK06589 278 aefnwLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYS 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 325 RLGSRSLLINKGLMGFMPsMTMWWFLLISSSMAAPPSLN------LMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLY 398
Cdd:PRK06589 358 LKKEDQVDKLHGTSKSFP-LISFIISISSLSLIGIPIFSgfiskfLILLAASEQNQPWLSIIVMLVVIASSILSALYLLK 436
|
....
gi 1143273021 399 LYSF 402
Cdd:PRK06589 437 ILSS 440
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
150-316 |
1.23e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 40.96 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 150 FASMPLLVGLFYIYVSSGSLYLGN--DCLGGGDGLISYICLILAFLVS--------VPMflvHLWLPSAHVEAPVAGSMI 219
Cdd:PRK05777 165 LASGFLLYGMSLLYGATGSLSFAGiaKALADGSGNSLLLLFGLVFLLVglafklsaVPF---HMWTPDVYEGAPTPVTAF 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 220 LAGVLLKLGGYGLLRVYFM-LTKMGVLMNFFFISISLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGF 298
Cdd:PRK05777 242 LATAPKIAAFAVLLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGY 321
|
170
....*....|....*...
gi 1143273021 299 MSSYTLMLAHGLCSSGMF 316
Cdd:PRK05777 322 SAVLFYLLAYLFMTLGAF 339
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
90-400 |
1.33e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 40.91 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 90 FLGLIIFLLMMLIcafISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSL 169
Cdd:COG1009 116 YLLLFMAAMLGLV---LSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 170 YLgNDCLGGGDGLIS--YICLILAFLVSVPM-----FLVHLWLPSAhVEAP-------------VAGSMILAgvllklgg 229
Cdd:COG1009 193 NF-SELLAAAPTILSspLLTLILLLLLLGAFgksaqFPLHFWLPDA-MEGPtpvsallhaatmvKAGVYLLA-------- 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 230 ygllRVYFMLTKMGVLMNFFFI--SISLLGGVMISilcLCQSDLKSLIAYSSVAHMGLVLGGIMTMnnwGFMSSYTLMLA 307
Cdd:COG1009 263 ----RLSPLFALSPVWLTVVAIigAITALFAALIA---LAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLT 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 308 HGLCSSGMFCLANISYERLGSRSLLINKGLMGFMPsMTMWWFLLISSSMAAPPSLN------LMgeIGLLISMVGWSWFV 381
Cdd:COG1009 333 HAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMP-ITAITFLIGALSLAGIPPFAgffskeAI--LEAALEAGGLGPLL 409
|
330
....*....|....*....
gi 1143273021 382 MFMLMLMSFLSAVYSLYLY 400
Cdd:COG1009 410 LAVALLGAFLTAFYSFRLF 428
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
181-316 |
3.96e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 39.46 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 181 GLISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLggygllrVYFMLTKMgVLMNFFFISISLLGGVM 260
Cdd:MTH00198 298 GSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFT-------VYILLTSL-VITSKLLLSVAIISLVV 369
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1143273021 261 ISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMF 316
Cdd:MTH00198 370 GAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
91-397 |
5.40e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 38.94 E-value: 5.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 91 LGLIIFLLMMLICAfiSMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSLY 170
Cdd:COG1007 107 LLLFATLGMMLMAS--ANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 171 LGndclGGGDGLISYICLILAFLVSVPMFLV-----------HLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRVyfML 239
Cdd:COG1007 185 LA----GIAAALAAGGANSPLLLLGLVLVLAglafklsavpfHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRL--LV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 240 TKMGVLMNFFFISISLLGGV-MI--SILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSSGMF 316
Cdd:COG1007 259 EAFPGLAADWQLLLAVLAVLsMTvgNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 317 -CLANISYERLGSRSLLINKGLMGFMPSMTmwWFLLISS-SMA-APPSLNLMGEIGLLISMV--GWSWFVMFMLmLMSFL 391
Cdd:COG1007 339 aVILLLSRKGGEAEEIEDLAGLARRSPLLA--LAMTIFLlSLAgIPPTAGFFGKFYVFSAAVeaGLYWLAVIAV-LNSVI 415
|
....*.
gi 1143273021 392 SAVYSL 397
Cdd:COG1007 416 SAYYYL 421
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
96-388 |
7.78e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.47 E-value: 7.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 96 FLLMMLICAFISMDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYVSSGSLYLGNDC 175
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 176 LGGGDGL--------ISYICLILAFLVSVPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLggygllrVYFMLTKMGVLMN 247
Cdd:MTH00196 81 LVLNSGQsfssvsvpIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143273021 248 FFFISIsLLGGVMISILCLCQSDLKSLIAYSSVAHMGLVLGGIMTMNNWGFMSSYTLMLAHGLCSsgmFCLANISYERLG 327
Cdd:MTH00196 154 ILLIGG-LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMS---ICVFSIILALNV 229
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1143273021 328 SRSLLIN-KGLMGFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLM 388
Cdd:MTH00196 230 YKNLIIEfSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVF 291
|
|
| |
