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Conserved domains on  [gi|1241822532|gb|ATA58336|]
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NADH dehydrogenase subunit 3 [Bolivaritettix yuanbaoshanensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.87e-34

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 114.18  E-value: 3.87e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   1 MYSMLTTMMITLSIILLMAFLSKMISQKSIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1241822532  81 MKNSNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.87e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 114.18  E-value: 3.87e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   1 MYSMLTTMMITLSIILLMAFLSKMISQKSIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1241822532  81 MKNSNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-114 8.93e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.80  E-value: 8.93e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532  20 FLSKMISQKSiFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYWWLSTTIFIAI 99
Cdd:pfam00507   2 LLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGW-FGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 1241822532 100 LLIGLYYEWMQGMLK 114
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 10-115 2.96e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.02  E-value: 2.96e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532  10 ITLSIILLMAFLSKMISQKSiFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYW 89
Cdd:COG0838    14 VALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW-FG 91

                          90       100
                  ....*....|....*....|....*.
gi 1241822532  90 WLSTTIFIAILLIGLYYEWMQGMLKW 115
Cdd:COG0838    92 LIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.87e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 114.18  E-value: 3.87e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   1 MYSMLTTMMITLSIILLMAFLSKMISQKSIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1241822532  81 MKNSNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-115 2.29e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 109.48  E-value: 2.29e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   4 MLTTMMITLSIILLMAFLSKMISQKSIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1241822532  84 SNLNYWWLSTTIFIAILLIGLYYEWMQGMLKW 115
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 2.74e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 101.99  E-value: 2.74e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   1 MYSMLTTMMITLSIILLMAFLSKMISQKSIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1241822532  81 MKNSNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 8.90e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 98.13  E-value: 8.90e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   1 MYSMLTTMMITLSIILLMAFLSKMISQKSIfDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1241822532  81 MKNSNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-117 8.78e-27

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 95.70  E-value: 8.78e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   1 MYSMLTTMMITLSIILLMAFLSKMISQKSIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1241822532  81 MKNSNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWAT 117
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWSS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-114 8.93e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.80  E-value: 8.93e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532  20 FLSKMISQKSiFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYWWLSTTIFIAI 99
Cdd:pfam00507   2 LLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGW-FGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 1241822532 100 LLIGLYYEWMQGMLK 114
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 10-115 2.96e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.02  E-value: 2.96e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532  10 ITLSIILLMAFLSKMISQKSiFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYW 89
Cdd:COG0838    14 VALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW-FG 91

                          90       100
                  ....*....|....*....|....*.
gi 1241822532  90 WLSTTIFIAILLIGLYYEWMQGMLKW 115
Cdd:COG0838    92 LIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.29e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 87.67  E-value: 1.29e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   1 MYSMLTTMMITLSIILLMAFLSKMISQKSIfDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTP-DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1241822532  81 MKNSNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:MTH00136   80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 3.63e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 86.10  E-value: 3.63e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   1 MYSMLTTMMITLSIILLMAFLSKMiSQKSIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFW-LPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1241822532  81 MKNSNLNYWWlsTTIFIAILLIGLYYEWMQGMLKW 115
Cdd:MTH00203   80 NQLSSLSLLL--AFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 3-116 1.04e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 84.93  E-value: 1.04e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   3 SMLTTMMITLSIILLMAFLSKMISQKSIfDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMK 82
Cdd:MTH00113    2 NLISMLTISLALSTILTTLNFWLTQTKP-DNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1241822532  83 NSNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 4-116 5.44e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 83.12  E-value: 5.44e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   4 MLTTMMITLSIILLMAFLSKMISQKSIfDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNNP-DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1241822532  84 SNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 7-116 1.26e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 82.30  E-value: 1.26e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   7 TMMITLSIILLMAFLSKMIS----QKSIFdREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMK 82
Cdd:MTH00106    2 NLMLTLLTNTLLASLLVLIAfwlpQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1241822532  83 NSNLNYWWLSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 7.17e-21

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 80.68  E-value: 7.17e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   8 MMITLSIILLMAFLSKMISQKSiFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLP-MITIMKNSNL 86
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWL 93

                          90       100       110
                  ....*....|....*....|....*....|
gi 1241822532  87 NYWwlSTTIFIAILLIGLYYEWMQGMLKWA 116
Cdd:PRK06602   94 GFV--EAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 2-115 2.27e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 76.64  E-value: 2.27e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   2 YSMLTTMMITLSIILLMAFLSKMISQKSIfDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIM 81
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQP-DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLY 79

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1241822532  82 KNSNLNYWWLsTTIFIAILLIGLYYEWMQGMLKW 115
Cdd:MTH00018   80 NQIAPFGFWT-MVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 3.95e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 73.59  E-value: 3.95e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532  32 DREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLNYWWLsTTIFIAILLIGLYYEWMQG 111
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWV-MYLFLIILTIGLIYEWVKG 113


                  ....
gi 1241822532 112 MLKW 115
Cdd:MTH00055  114 GLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-115 3.93e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 71.12  E-value: 3.93e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   3 SMLTTMMITLSIILLMAFLSKMISQKSIF----DREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMI 78
Cdd:MTH00030    7 TIFFSTLLGVGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWS 86

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1241822532  79 TIMKNSNLNYWWLSTTiFIAILLIGLYYEWMQGMLKW 115
Cdd:MTH00030   87 IVFNQLNLFSFWIVYT-FLIVLAIGLAYEWIKGGLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
8-115 8.72e-11

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 55.06  E-value: 8.72e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   8 MMITLSIILLMAFLSKMISQK-SIFDRE--KSSPFECGFNPQTHP-RIpfSVQFFLISMLFLIFDIEITLMLPMITIMKN 83
Cdd:PRK08489   17 LVLTFVAFFLTTRLARFISRKlAQKNTEklKLAIYECGPEPVKQPnRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKL 94

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1241822532  84 SNLnYWWLSTTIFIAILLIGLYYEWMQGMLKW 115
Cdd:PRK08489   95 LGL-FGLIEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 4.64e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 52.82  E-value: 4.64e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532  32 DREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYWWLSTTIFIAILLIGLYYEWMQG 111
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGL-FALIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 1241822532 112 MLKW 115
Cdd:PRK07756  118 VLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 31-115 6.31e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 52.37  E-value: 6.31e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532  31 FDREKSSPFECGFNPQTHPRIP--FSVQFFLISMLFLIFDIEITLMLPMiTIMKNSNLNYWWLSTTIFIAILLIGLYYEW 108
Cdd:PRK07928   33 YNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPW-AVSFDALGVFGLVEMALFMLTVFVAYAYVW 111


                  ....*..
gi 1241822532 109 MQGMLKW 115
Cdd:PRK07928  112 RRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 3-115 6.59e-07

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 44.59  E-value: 6.59e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   3 SMLTTMMITLSIILLMAFLSKMISQKSIfDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMK 82
Cdd:CHL00022    9 IFWAFLIISSLIPILAFLISGLLAPISK-GPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFD 87

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1241822532  83 NSNLnYWWLSTTIFIAILLIGLYYEWMQGMLKW 115
Cdd:CHL00022   88 VLGV-SAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 4.78e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 40.18  E-value: 4.78e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532  32 DREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITIMKNSNLnYWWLSTTIFIAILLIGLYYEWMQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGL-IPFIETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 1241822532 112 MLKW 115
Cdd:PRK06432  139 YMRW 142
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 2.12e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 37.57  E-value: 2.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532   1 MYSMLTTMMITLSIILLMAFLSKMISQKSiFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITI 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1241822532  81 MKNSNLNYWwlsttIFIAILLIGLYYEWMQGMLKW 115
Cdd:MTH00092   80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 29-115 2.14e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.95  E-value: 2.14e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822532  29 SIFDREKSSPFECGFNPQTHPRIPFSVQFFLISMLFLIFDIEITLMLPMITimkNSNLNYWWLSTTIFIAILLIGLYYEW 108
Cdd:MTH00060   31 YSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPF---QGLLFYNFWYYYFFLLLLFLGFVVEL 107


                  ....*..
gi 1241822532 109 MQGMLKW 115
Cdd:MTH00060  108 FSGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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