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Conserved domains on  [gi|1241822537|gb|ATA58341|]
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NADH dehydrogenase subunit 1 [Bolivaritettix yuanbaoshanensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 16-310 5.73e-123

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 354.46  E-value: 5.73e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:MTH00193   11 LIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYY 175
Cdd:MTH00193   91 YPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNY 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 176 QS-VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYN 254
Cdd:MTH00193  171 QKyIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1241822537 255 SLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSFMI 310
Cdd:MTH00193  251 SLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 16-310 5.73e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 354.46  E-value: 5.73e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:MTH00193   11 LIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYY 175
Cdd:MTH00193   91 YPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNY 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 176 QS-VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYN 254
Cdd:MTH00193  171 QKyIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1241822537 255 SLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSFMI 310
Cdd:MTH00193  251 SLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
16-297 5.63e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 278.20  E-value: 5.63e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:pfam00146   5 LLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPY--LTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYL 173
Cdd:pfam00146  85 IPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIV 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 174 YYQS-VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGG- 251
Cdd:pfam00146 165 EAQAgGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGw 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1241822537 252 -----DYNSLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:pfam00146 245 lgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-297 5.14e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 268.92  E-value: 5.14e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:COG1005    18 ILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAV 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLTFFC--SFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYL 173
Cdd:COG1005    98 IPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIV 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 174 YYQS--VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGG 251
Cdd:COG1005   178 EAQAggLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGG 257

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1241822537 252 dYNS-------------LYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:COG1005   258 -WLGpfpilplgglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
20-297 6.30e-46

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 158.33  E-value: 6.30e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  20 VLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISP---MLSLFLSL----FI 92
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPivaMGSVFLMLvaipFG 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  93 WMVFP---YLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDL 169
Cdd:NF040610  103 AVIINgveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 170 HYYLYYQS-VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFF 248
Cdd:NF040610  183 VEIVEAQSpIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1241822537 249 LGGdYN----------------SLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:NF040610  263 LGG-WNlpgfvtdipvlgiilpTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 16-310 5.73e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 354.46  E-value: 5.73e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:MTH00193   11 LIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYY 175
Cdd:MTH00193   91 YPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNY 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 176 QS-VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYN 254
Cdd:MTH00193  171 QKyIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1241822537 255 SLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSFMI 310
Cdd:MTH00193  251 SLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 17-308 6.77e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 326.22  E-value: 6.77e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  17 LFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVF 96
Cdd:MTH00225   11 LICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLY 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  97 PYLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYYQ 176
Cdd:MTH00225   91 PSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQ 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 177 SV-WFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYNS 255
Cdd:MTH00225  171 KYfWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVT 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1241822537 256 LYFFF--KLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSF 308
Cdd:MTH00225  251 IDLFLilKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 19-307 4.36e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 321.82  E-value: 4.36e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  19 MVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVFPY 98
Cdd:MTH00143   13 CVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPS 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  99 LTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDL-HYYLYYQS 177
Cdd:MTH00143   93 YFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFiEISESQFS 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 178 VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGD----- 252
Cdd:MTH00143  173 VWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSsvlfl 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1241822537 253 YNSLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFS 307
Cdd:MTH00143  253 LGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 20-309 3.20e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 305.01  E-value: 3.20e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  20 VLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00071   18 VLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 100 TFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYYQS-V 178
Cdd:MTH00071   98 NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEfM 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 179 WFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYNSLY- 257
Cdd:MTH00071  178 WLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQp 257

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1241822537 258 ------FFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSFM 309
Cdd:MTH00071  258 elstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPIS 315
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 20-297 9.23e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 298.73  E-value: 9.23e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  20 VLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00111   18 ILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 100 TFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYYQ-SV 178
Cdd:MTH00111   98 FPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQePL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 179 WFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYNSLY- 257
Cdd:MTH00111  178 WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPp 257

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1241822537 258 ------FFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:MTH00111  258 elftinLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 19-313 1.52e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 297.59  E-value: 1.52e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  19 MVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVFPY 98
Cdd:MTH00218   14 PVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPL 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  99 LTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYYQ-S 177
Cdd:MTH00218   94 PFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQeT 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 178 VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYNSLY 257
Cdd:MTH00218  174 IWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTIN 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1241822537 258 FFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSFMIYVL 313
Cdd:MTH00218  254 LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 20-297 7.14e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 296.52  E-value: 7.14e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  20 VLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00134   19 VLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 100 TFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYYQ-SV 178
Cdd:MTH00134   99 YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQeSI 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 179 WFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYN---- 254
Cdd:MTH00134  179 WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIptlp 258

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1241822537 255 ---SLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:MTH00134  259 eltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 20-310 2.39e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 294.99  E-value: 2.39e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  20 VLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00104   13 ILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMP 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 100 TFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYYQ-SV 178
Cdd:MTH00104   93 YPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQeHL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 179 WFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYN---- 254
Cdd:MTH00104  173 WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNpymp 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1241822537 255 ---SLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSFMI 310
Cdd:MTH00104  253 elyTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 20-310 6.15e-95

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 283.79  E-value: 6.15e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  20 VLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVFPYL 99
Cdd:MTH00040   17 VLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVP 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 100 TFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYYQS-V 178
Cdd:MTH00040   97 TPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNgS 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 179 WFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGD------ 252
Cdd:MTH00040  177 WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGspfnei 256

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 253 --YNSLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSFMI 310
Cdd:MTH00040  257 fpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 16-310 1.02e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 282.79  E-value: 1.02e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:MTH00195   11 QIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVP 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYY 175
Cdd:MTH00195   91 IPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVIS 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 176 QSV-WFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDyN 254
Cdd:MTH00195  171 QGFsWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG-G 249

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1241822537 255 SLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSFMI 310
Cdd:MTH00195  250 TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
NADHdh pfam00146
NADH dehydrogenase;
16-297 5.63e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 278.20  E-value: 5.63e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:pfam00146   5 LLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPY--LTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYL 173
Cdd:pfam00146  85 IPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIV 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 174 YYQS-VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGG- 251
Cdd:pfam00146 165 EAQAgGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGw 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1241822537 252 -----DYNSLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:pfam00146 245 lgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-297 5.14e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 268.92  E-value: 5.14e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:COG1005    18 ILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAV 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLTFFC--SFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYL 173
Cdd:COG1005    98 IPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIV 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 174 YYQS--VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGG 251
Cdd:COG1005   178 EAQAggLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGG 257

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1241822537 252 dYNS-------------LYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:COG1005   258 -WLGpfpilplgglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 17-310 5.55e-86

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 260.48  E-value: 5.55e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  17 LFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVF 96
Cdd:MTH00010   13 YVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  97 PYLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYLYYQ 176
Cdd:MTH00010   93 PHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 177 SVWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLG----GD 252
Cdd:MTH00010  173 YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfipsIF 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1241822537 253 YNSLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSFMI 310
Cdd:MTH00010  253 ISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
16-297 1.55e-83

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 254.73  E-value: 1.55e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:PRK06076   19 ILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAV 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLTFF--CSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYL 173
Cdd:PRK06076   99 IPFGPELviADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIV 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 174 YYQS-VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGd 252
Cdd:PRK06076  179 EAQFlSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGG- 257

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1241822537 253 YNS-----------LYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:PRK06076  258 WLPpfplgggipgaIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 16-302 1.17e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 252.73  E-value: 1.17e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:MTH00216   15 IIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGV 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYL--TFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYL 173
Cdd:MTH00216   95 IPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIV 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 174 YYQS--VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGG 251
Cdd:MTH00216  175 LAQNngIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGG 254

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1241822537 252 --------DYNSLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYF 302
Cdd:MTH00216  255 wlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-305 1.58e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 249.64  E-value: 1.58e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:MTH00054   11 ILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGV 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLT--FFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYL 173
Cdd:MTH00054   91 IPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIV 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 174 YYQS-VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGG- 251
Cdd:MTH00054  171 LAQKnIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGw 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1241822537 252 ---------DYNSLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIG 305
Cdd:MTH00054  251 lvisgptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSG 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-305 2.59e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 211.41  E-value: 2.59e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:MTH00029   16 IFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAI 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYL--TFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYL 173
Cdd:MTH00029   96 VTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIV 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 174 YYQ-SVWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGG- 251
Cdd:MTH00029  176 ISQrSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGw 255

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1241822537 252 ----------------------DYNSLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIG 305
Cdd:MTH00029  256 lspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAG 331
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-308 3.01e-58

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 188.57  E-value: 3.01e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMV 95
Cdd:MTH00090    5 MMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFfligcydLHYYLYY 175
Cdd:MTH00090   85 LPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIM-------LHNNSFS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 176 QSVWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYNS 255
Cdd:MTH00090  158 FVSSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSFLM 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1241822537 256 LYFFFKLMfvtfsfLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYFYIGFSF 308
Cdd:MTH00090  238 LFLIFSLL------IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
20-297 6.30e-46

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 158.33  E-value: 6.30e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  20 VLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISP---MLSLFLSL----FI 92
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPivaMGSVFLMLvaipFG 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  93 WMVFP---YLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDL 169
Cdd:NF040610  103 AVIINgveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 170 HYYLYYQS-VWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFF 248
Cdd:NF040610  183 VEIVEAQSpIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1241822537 249 LGGdYN----------------SLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:NF040610  263 LGG-WNlpgfvtdipvlgiilpTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 17-302 2.34e-43

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 150.46  E-value: 2.34e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  17 LFMVLLSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISPMLSLFLSLFIWMVF 96
Cdd:MTH00058   11 LLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIY 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  97 PYLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLhYYLYYQ 176
Cdd:MTH00058   91 GSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL-VDFYYS 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 177 SVWFIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFLISLFFLGGDYNSL 256
Cdd:MTH00058  170 GWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSI 249

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1241822537 257 YFFFKLMFvtfsFLWLRGTLPRYRYDKLMYLSWKGFLPVALNYMYF 302
Cdd:MTH00058  250 MLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFV 291
ndhA CHL00032
NADH dehydrogenase subunit 1
 16-297 2.88e-33

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 125.45  E-value: 2.88e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVL---LSVAFLTLLERSILGYIQLRKGPNSVGMLGVFQPFGDAAKLFTKQCVTPYVSNYIFYIISP---MLSLFLS 89
Cdd:CHL00032   33 ILTLVLgitIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPsiaVISILLS 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  90 LFIwMVFPYLTFFCSFSLGLLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDL 169
Cdd:CHL00032  113 YLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLST 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 170 HYYLYYQSVWFiFLSLPL------FLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEYSMIIFMGFL 243
Cdd:CHL00032  192 VDIVEAQSKYG-FWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLF 270

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1241822537 244 ISLFFLGGDYNSLYFFFKLMFV---------------------TFSFLWL----RGTLPRYRYDKLMYLSWKGFLPVAL 297
Cdd:CHL00032  271 VTVLYLGGWNLSIPYIFIPELFeinktggvfgttigifitlakTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
16-293 3.38e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 113.35  E-value: 3.38e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  16 ILFMVLLSVaFLTLLERSILGYIQLRKGPnsvgmlGVFQPFGDAAKLFTKQCVTPYVSNYIFYIiSPMLSLFLSLFIWMV 95
Cdd:COG0650    11 LLLALLLAP-LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRA-APYVALAAMLLAALL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537  96 FPYLTFFCSFSLG--LLFIMCIMSLGVFGMMVSGWSSNSNYALLGALRGVAQTISYEVSLLLIMLSLFFLIGCYDLHYYL 173
Cdd:COG0650    83 VPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241822537 174 YYQSVW----FIFLSLPLFLCFYCSCLAETNRAPFDFAEGESELVSGFNVEYGGLGFALIFLAEY-SMIIFMGFLISLFF 248
Cdd:COG0650   163 AYQAAHgpllLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAAlKLFVLLSLFVNLFL 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1241822537 249 LGG-----DYNSLYFFFKLMFVTFSFLWLRGTLPRYRYDKLMYLSWKGFL 293
Cdd:COG0650   243 PWGialtlLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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