|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
4.29e-67 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 197.47 E-value: 4.29e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 1 MNLILVLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 1244551995 81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.43e-49 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 153.15 E-value: 1.43e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 1 MNLIL-VLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAM 79
Cdd:MTH00136 1 MNLITtILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 1244551995 80 QLTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
1.73e-45 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 142.83 E-value: 1.73e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 3 LILVLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQLT 82
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 1244551995 83 STKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
2.52e-45 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 142.33 E-value: 2.52e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 1 MNLILVLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|....
gi 1244551995 81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWT 114
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
1.70e-38 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 125.09 E-value: 1.70e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 1 MNLILVLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 1244551995 81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
3-113 |
1.86e-32 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 109.60 E-value: 1.86e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 3 LILVLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQLT 82
Cdd:MTH00203 4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83
|
90 100 110
....*....|....*....|....*....|.
gi 1244551995 83 StkTTLILSYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00203 84 S--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
3.29e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 96.47 E-value: 3.29e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 1 MNLILVLIINFSLATIVVLIAFWLPQLYLY-LEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAM 79
Cdd:MTH00148 2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81
|
90 100 110
....*....|....*....|....*....|....*.
gi 1244551995 80 QLTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00148 82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
18-112 |
1.60e-26 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 94.03 E-value: 1.60e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 18 VLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTKTT-LILSYSLII 96
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78
|
90
....*....|....*.
gi 1244551995 97 LLTSGLAYEWFQKGLE 112
Cdd:pfam00507 79 ILLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
2-113 |
3.77e-25 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 90.99 E-value: 3.77e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 2 NLILVLIINFSLATIVVLIAFWL-PQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00161 1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
|
90 100 110
....*....|....*....|....*....|...
gi 1244551995 81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00161 81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
3-113 |
4.92e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 85.81 E-value: 4.92e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 3 LILVLIINFSLATIVVLIAFwlpQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQLT 82
Cdd:MTH00202 8 SILSILISSLLFLVSWMLSF---RSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSS 84
|
90 100 110
....*....|....*....|....*....|.
gi 1244551995 83 STKTTLILSYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00202 85 WSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
12-114 |
3.93e-21 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 81.06 E-value: 3.93e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 12 SLATIVVLIAFWLPQLYLYL------------EKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAM 79
Cdd:MTH00012 2 SLMMIPMMISLILPPLVLGAawvlaarstadrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTIL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 1244551995 80 QLTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWT 114
Cdd:MTH00012 82 MTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
3-113 |
1.25e-20 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 79.78 E-value: 1.25e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 3 LILVLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLT 82
Cdd:COG0838 8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85
|
90 100 110
....*....|....*....|....*....|..
gi 1244551995 83 STKTTLILSYSL-IILLTSGLAYEWFQKGLEW 113
Cdd:COG0838 86 ELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
2.13e-19 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 76.67 E-value: 2.13e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 1 MNLILVLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00055 6 LGIFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYN 85
|
90 100 110
....*....|....*....|....*....|...
gi 1244551995 81 LTSTKTTLILsYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00055 86 QIGLFGFWVM-YLFLIILTIGLIYEWVKGGLEW 117
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
1-113 |
7.93e-18 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 72.40 E-value: 7.93e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 1 MNLILVLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00018 1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80
|
90 100 110
....*....|....*....|....*....|...
gi 1244551995 81 LTSTKTTLILsYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00018 81 QIAPFGFWTM-VGFLFILTLGLIYEWIKGGLEW 112
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
32-114 |
2.85e-17 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 71.43 E-value: 2.85e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 32 EKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTKTTLILSYSLIIL-LTSGLAYEWFQKG 110
Cdd:PRK06602 40 EKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLGFVEAMIFILvLLVGLVYLWRKGA 117
|
....
gi 1244551995 111 LEWT 114
Cdd:PRK06602 118 LDWE 121
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
32-113 |
2.68e-16 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 68.81 E-value: 2.68e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 32 EKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTKT-TLILSYSLIILLTSGLAYEWFQKG 110
Cdd:MTH00030 42 EKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLfSFWIVYTFLIVLAIGLAYEWIKGG 119
|
...
gi 1244551995 111 LEW 113
Cdd:MTH00030 120 LEW 122
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
33-114 |
3.38e-09 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 50.44 E-value: 3.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 33 KSSPYECGFDPLGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWAMQLTSTKTTLILSYSLIILLTS-GLAYEWFQK 109
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALFMLTVFvAYAYVWRRG 114
|
....*
gi 1244551995 110 GLEWT 114
Cdd:PRK07928 115 GLEWD 119
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
7.43e-08 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 46.81 E-value: 7.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 1 MNLILVLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwamq 80
Cdd:MTH00092 2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----- 76
|
90 100 110
....*....|....*....|....*....|....
gi 1244551995 81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWT 114
Cdd:MTH00092 77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIWV 110
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
11-114 |
7.83e-08 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 46.90 E-value: 7.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 11 FSLATIVVLIAFWLPQLYLYL----EKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTK- 85
Cdd:CHL00022 14 LIISSLIPILAFLISGLLAPIskgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGv 91
|
90 100
....*....|....*....|....*....
gi 1244551995 86 TTLILSYSLIILLTSGLAYEWFQKGLEWT 114
Cdd:CHL00022 92 SAFIEALIFVLILIVGLVYAWRKGALEWS 120
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
32-113 |
5.29e-07 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 44.73 E-value: 5.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 32 EKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWAMQLTSTKT-TLILSYSLIILLTSGLAYEWFQKG 110
Cdd:PRK07756 41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLfALIEMLIFVVMLLVGLAYAWKKKV 118
|
...
gi 1244551995 111 LEW 113
Cdd:PRK07756 119 LQW 121
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
33-113 |
1.76e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 40.81 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551995 33 KSSPYECGFDPLGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTKT-TLILSYSLIILLTSGLAYEWFQKGL 111
Cdd:PRK08489 47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLfGLIEMLLFIVLLTIGFIYAWKKGAL 123
|
..
gi 1244551995 112 EW 113
Cdd:PRK08489 124 EW 125
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
35-76 |
2.76e-03 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 34.87 E-value: 2.76e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1244551995 35 SPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060 39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|