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Conserved domains on  [gi|1258168637|gb|ATL15846|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Zhangixalus achantharrhena]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 6-113 2.15e-58

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 175.49  E-value: 2.15e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   6 LTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLPTPSTV 85
Cdd:MTH00136    9 TITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLT 88

                          90       100
                  ....*....|....*....|....*...
gi 1258168637  86 IMWAFIILILLTLGFIYEWLQAGLEWAE 113
Cdd:MTH00136   89 FFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 6-113 2.15e-58

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 175.49  E-value: 2.15e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   6 LTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLPTPSTV 85
Cdd:MTH00136    9 TITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLT 88

                          90       100
                  ....*....|....*....|....*...
gi 1258168637  86 IMWAFIILILLTLGFIYEWLQAGLEWAE 113
Cdd:MTH00136   89 FFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
17-110 8.00e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 99.81  E-value: 8.00e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637  17 LISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLlpLPWAMQLPTPSTVIMWAFIILIL- 95
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIFIAi 79

                          90
                  ....*....|....*
gi 1258168637  96 LTLGFIYEWLQAGLE 110
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-111 6.00e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.25  E-value: 6.00e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   2 LIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLlpLPWAMQLPT 81
Cdd:COG0838     9 LIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1258168637  82 PSTVIMWA-FIILILLTLGFIYEWLQAGLEW 111
Cdd:COG0838    87 LGWFGLIEmLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 6-113 2.15e-58

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 175.49  E-value: 2.15e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   6 LTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLPTPSTV 85
Cdd:MTH00136    9 TITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLT 88

                          90       100
                  ....*....|....*....|....*...
gi 1258168637  86 IMWAFIILILLTLGFIYEWLQAGLEWAE 113
Cdd:MTH00136   89 FFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-113 5.31e-58

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 174.41  E-value: 5.31e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLP 80
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1258168637  81 TPSTVIMWAFIILILLTLGFIYEWLQAGLEWAE 113
Cdd:MTH00069   82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-112 1.43e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 155.42  E-value: 1.43e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLP 80
Cdd:MTH00113    3 LISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLT 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1258168637  81 TPSTVIMWAFIILILLTLGFIYEWLQAGLEWA 112
Cdd:MTH00113   83 TPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-113 7.88e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 146.24  E-value: 7.88e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLP 80
Cdd:MTH00106    3 LMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTN 82

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1258168637  81 TPSTVIMWAFIILILLTLGFIYEWLQAGLEWAE 113
Cdd:MTH00106   83 NLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-113 1.01e-39

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 128.18  E-value: 1.01e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLP 80
Cdd:MTH00042    4 LIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLIT 83

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1258168637  81 TPSTVIMWAFIILILLTLGFIYEWLQAGLEWAE 113
Cdd:MTH00042   84 NPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-111 1.49e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 125.01  E-value: 1.49e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLP 80
Cdd:MTH00203    4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1258168637  81 TPStvIMWAFIILILLTLGFIYEWLQAGLEW 111
Cdd:MTH00203   84 SLS--LLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-113 4.10e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 101.47  E-value: 4.10e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPMM-IPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQL 79
Cdd:MTH00148    4 ILLSLLFALILSPVLLLLGLVLSKRsYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGS 83

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1258168637  80 PTPSTVIMWAFIILILLTLGFIYEWLQAGLEWAE 113
Cdd:MTH00148   84 SFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
17-110 8.00e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 99.81  E-value: 8.00e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637  17 LISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLlpLPWAMQLPTPSTVIMWAFIILIL- 95
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIFIAi 79

                          90
                  ....*....|....*
gi 1258168637  96 LTLGFIYEWLQAGLE 110
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-111 3.92e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 93.69  E-value: 3.92e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPM-MIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQL 79
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKkSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1258168637  80 PTPSTVIMWAFIILILLTLGFIYEWLQAGLEW 111
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 3-111 4.28e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 91.31  E-value: 4.28e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   3 IFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLlpLPWAMQLPTP 82
Cdd:MTH00055   10 ILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQI 87

                          90       100       110
                  ....*....|....*....|....*....|
gi 1258168637  83 STVIMWA-FIILILLTLGFIYEWLQAGLEW 111
Cdd:MTH00055   88 GLFGFWVmYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-111 4.06e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 88.58  E-value: 4.06e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLlpLPWAMQLP 80
Cdd:MTH00018    3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYN 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1258168637  81 TPSTVIMWAFII-LILLTLGFIYEWLQAGLEW 111
Cdd:MTH00018   81 QIAPFGFWTMVGfLFILTLGLIYEWIKGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 2-112 5.60e-24

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 88.38  E-value: 5.60e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   2 LIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLlpLPWAMQLPT 81
Cdd:PRK06602   12 LIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFRE 89

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1258168637  82 PSTVIMWAFIILIL-LTLGFIYEWLQAGLEWA 112
Cdd:PRK06602   90 IGWLGFVEAMIFILvLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-111 6.00e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.25  E-value: 6.00e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   2 LIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLlpLPWAMQLPT 81
Cdd:COG0838     9 LIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1258168637  82 PSTVIMWA-FIILILLTLGFIYEWLQAGLEW 111
Cdd:COG0838    87 LGWFGLIEmLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 6-113 1.33e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 84.66  E-value: 1.33e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   6 LTALTLSVILALISFWLPM-MIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLPTPST 84
Cdd:MTH00202    9 ILSILISSLLFLVSWMLSFrSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKG 88

                          90       100
                  ....*....|....*....|....*....
gi 1258168637  85 VIMWAFIILILLTLGFIYEWLQAGLEWAE 113
Cdd:MTH00202   89 GLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 28-112 2.45e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 79.13  E-value: 2.45e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637  28 DTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLPTPSTVIMWAFIILILLTLGFIYEWLQA 107
Cdd:MTH00012   32 DREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWREG 111


                  ....*
gi 1258168637 108 GLEWA 112
Cdd:MTH00012  112 SLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-111 4.74e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 73.43  E-value: 4.74e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   3 IFTLTALTLSVILALISFWLPM-------MIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLlpLPW 75
Cdd:MTH00030    8 IFFSTLLGVGIILLLVSISFTLgnsriglTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPW 85

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1258168637  76 AMQLPTPSTVIMW-AFIILILLTLGFIYEWLQAGLEW 111
Cdd:MTH00030   86 SIVFNQLNLFSFWiVYTFLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 2-111 2.42e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 53.45  E-value: 2.42e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   2 LIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLlpLPWAMQLPT 81
Cdd:CHL00022   11 WAFLIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDV 88

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1258168637  82 PS-TVIMWAFIILILLTLGFIYEWLQAGLEW 111
Cdd:CHL00022   89 LGvSAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
1-111 3.47e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 53.13  E-value: 3.47e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILA-LISFWLPMMIPDTEKLSPYECGFDPLGSARlPYSMRFFLVAILFLLFDLEIALLlpLPWAMQ- 78
Cdd:PRK08489   16 LLVLTFVAFFLTTRLArFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDf 92

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1258168637  79 --LPTPSTVIMWAFIilILLTLGFIYEWLQAGLEW 111
Cdd:PRK08489   93 klLGLFGLIEMLLFI--VLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 31-111 1.91e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 51.21  E-value: 1.91e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637  31 KLSPYECGFDP----LGSARLPysMRFFLVAILFLLFDLEIALLLPlpWAMQ---LPTPSTVIMWAFIILIllTLGFIYE 103
Cdd:PRK07928   37 KLEAYECGIEPtpqpAGGGRFP--VKYYLTAMLFIVFDIEIVFLYP--WAVSfdaLGVFGLVEMALFMLTV--FVAYAYV 110


                  ....*...
gi 1258168637 104 WLQAGLEW 111
Cdd:PRK07928  111 WRRGGLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
1-111 2.08e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.90  E-value: 2.08e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPlpWAM--- 77
Cdd:PRK07756   12 VLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVayd 89

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1258168637  78 QLPTPSTVIMwaFIILILLTLGFIYEWLQAGLEW 111
Cdd:PRK07756   90 KLGLFALIEM--LIFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-111 4.53e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 39.49  E-value: 4.53e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1258168637   1 MLIFTLTALTLSVILALISFWLPMMIPDTEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLpwamqLP 80
Cdd:MTH00092    4 LIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL-----LV 78

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1258168637  81 TPSTVIMWAFIILILLTLGFIYEWLQAGLEW 111
Cdd:MTH00092   79 SDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 33-111 4.16e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.80  E-value: 4.16e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1258168637  33 SPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPLPWAMQLptpSTVIMWAFIILILLTLGFIYEWLQAGLEW 111
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLL---FYNFWYYYFFLLLLFLGFVVELFSGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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