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Conserved domains on  [gi|1273810972|gb|ATQ39568|]
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NADH dehydrogenase subunit 5, partial (mitochondrion) [Betiscoides sp. B119_wi_65]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475935)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-241 2.71e-101

NADH dehydrogenase subunit 5; Provisional


:

Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 305.91  E-value: 2.71e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMC 80
Cdd:MTH00165  232 RFNNLLFSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLC 311

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  81 AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAAY 160
Cdd:MTH00165  312 AGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSY 391

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 161 SFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPIPFMVSLPYYLKFLTIVVVIFGSYLGYL 240
Cdd:MTH00165  392 SFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYE 471


                  .
gi 1273810972 241 V 241
Cdd:MTH00165  472 L 472
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-241 2.71e-101

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 305.91  E-value: 2.71e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMC 80
Cdd:MTH00165  232 RFNNLLFSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLC 311

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  81 AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAAY 160
Cdd:MTH00165  312 AGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSY 391

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 161 SFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPIPFMVSLPYYLKFLTIVVVIFGSYLGYL 240
Cdd:MTH00165  392 SFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYE 471


                  .
gi 1273810972 241 V 241
Cdd:MTH00165  472 L 472
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-241 9.72e-44

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 155.70  E-value: 9.72e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPML-DTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:COG1009   263 RLSPLFaLSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFL 342

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE-LVCLSWINCLIFFLYFVSTGLTA 158
Cdd:COG1009   343 GAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTA 421

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 159 AYSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWI---------IFPIPFMVSLPYYLKFLTIV 229
Cdd:COG1009   422 FYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLL 501

                         250
                  ....*....|..
gi 1273810972 230 VVIFGSYLGYLV 241
Cdd:COG1009   502 LSLLGIALGYLL 513
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
 1-241 1.71e-37

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 138.57  E-value: 1.71e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLD-TFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:TIGR01974 265 RTSPLFElSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFL 344

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAA 159
Cdd:TIGR01974 345 GAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAF 424

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 160 YSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPI-----------PFMVSLPYYLKFLTI 228
Cdd:TIGR01974 425 YSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLkgvlptsaepaLEHHHVPALEIWSPT 504

                         250
                  ....*....|...
gi 1273810972 229 VVVIFGSYLGYLV 241
Cdd:TIGR01974 505 AVAILGILLAYLL 517
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 14-153 2.87e-27

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 106.24  E-value: 2.87e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  14 FLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLKD 90
Cdd:pfam00361 149 ILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVH 228

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1273810972  91 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVS 153
Cdd:pfam00361 229 TRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-241 2.71e-101

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 305.91  E-value: 2.71e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMC 80
Cdd:MTH00165  232 RFNNLLFSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLC 311

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  81 AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAAY 160
Cdd:MTH00165  312 AGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSY 391

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 161 SFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPIPFMVSLPYYLKFLTIVVVIFGSYLGYL 240
Cdd:MTH00165  392 SFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYE 471


                  .
gi 1273810972 241 V 241
Cdd:MTH00165  472 L 472
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
 1-238 4.50e-70

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 224.72  E-value: 4.50e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTF-GFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:MTH00151  228 RFFPFLSSSsGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFL 307

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAA 159
Cdd:MTH00151  308 CAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTAL 387

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1273810972 160 YSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPIPFMVSLPYYLKFLTIVVVIFGSYLG 238
Cdd:MTH00151  388 YSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLS 466
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
 1-241 4.51e-69

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 222.21  E-value: 4.51e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKF-LLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:MTH00209  227 RFFPSLFSSPFFSMsLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFI 306

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAA 159
Cdd:MTH00209  307 CAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAA 386

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 160 YSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPIPFMVSLPYYLKFLTIVVVIFGSYLGY 239
Cdd:MTH00209  387 YSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMY 466


                  ..
gi 1273810972 240 LV 241
Cdd:MTH00209  467 MV 468
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
 1-240 1.27e-68

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 221.18  E-value: 1.27e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFG-FGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:MTH00207  231 RFYPFLSSTYwFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFV 310

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAA 159
Cdd:MTH00207  311 CAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAA 390

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 160 YSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPIPFMVSLPYYLKFLTIVVVIFGSYLGY 239
Cdd:MTH00207  391 YSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAW 470


                  .
gi 1273810972 240 L 240
Cdd:MTH00207  471 L 471
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
 1-241 2.76e-56

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 189.39  E-value: 2.76e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPM-LDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:MTH00211  256 RLSPLfQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFM 335

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAA 159
Cdd:MTH00211  336 CSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAA 415

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 160 YSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPIPFMV-SLPYYLKFLTIVVVIFGSYLG 238
Cdd:MTH00211  416 YSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLG 495


                  ...
gi 1273810972 239 YLV 241
Cdd:MTH00211  496 LEL 498
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
 16-238 7.38e-54

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 183.06  E-value: 7.38e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  16 LVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIR 95
Cdd:MTH00004  277 LCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIR 356

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  96 FMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAAYSFRLFYYSMSGDNNF 175
Cdd:MTH00004  357 KMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRT 436

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1273810972 176 YSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPI-PFMVSLPYYLKFLTIVVVIFGSYLG 238
Cdd:MTH00004  437 PPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLA 500
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
 1-234 2.06e-50

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 173.89  E-value: 2.06e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKFL-LVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:MTH00108  262 RFHPLMENNKTIQTLtLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFM 341

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAA 159
Cdd:MTH00108  342 CSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAA 421

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1273810972 160 YSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFP--IPFMvSLPYYLKFLTIVVVIFG 234
Cdd:MTH00108  422 YSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIPQM-TMPLYLKLTALAVTILG 497
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
 1-239 1.96e-49

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 171.31  E-value: 1.96e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFG-FGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:MTH00208  288 RTSPLISNSPwFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAA 159
Cdd:MTH00208  368 CSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAV 447

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 160 YSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPIPFMVsLPYYLKFLTIVVVIFGSYLGY 239
Cdd:MTH00208  448 YSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSF 526
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
 16-234 9.75e-48

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 166.62  E-value: 9.75e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  16 LVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIR 95
Cdd:MTH00066  275 LCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIR 354

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  96 FMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAAYSFRLFYYSMSGDNNF 175
Cdd:MTH00066  355 KMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRS 434

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 176 YSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPI-PFMVSLPYYLKFLTIVVVIFG 234
Cdd:MTH00066  435 LPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLG 494
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
 35-169 9.70e-46

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 161.15  E-value: 9.70e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  35 DLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVS 114
Cdd:MTH00137  302 DIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIG 381

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1273810972 115 SLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAAYSFRL-FYYSM 169
Cdd:MTH00137  382 SLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-241 9.72e-44

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 155.70  E-value: 9.72e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPML-DTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:COG1009   263 RLSPLFaLSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFL 342

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE-LVCLSWINCLIFFLYFVSTGLTA 158
Cdd:COG1009   343 GAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTA 421

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 159 AYSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWI---------IFPIPFMVSLPYYLKFLTIV 229
Cdd:COG1009   422 FYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLL 501

                         250
                  ....*....|..
gi 1273810972 230 VVIFGSYLGYLV 241
Cdd:COG1009   502 LSLLGIALGYLL 513
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
 1-241 1.71e-37

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 138.57  E-value: 1.71e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLD-TFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:TIGR01974 265 RTSPLFElSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFL 344

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAA 159
Cdd:TIGR01974 345 GAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAF 424

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 160 YSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPI-----------PFMVSLPYYLKFLTI 228
Cdd:TIGR01974 425 YSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLkgvlptsaepaLEHHHVPALEIWSPT 504

                         250
                  ....*....|...
gi 1273810972 229 VVVIFGSYLGYLV 241
Cdd:TIGR01974 505 AVAILGILLAYLL 517
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
 1-233 3.98e-37

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 137.52  E-value: 3.98e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKFLL-VVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:MTH00020  262 RSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFL 341

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  80 CAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAA 159
Cdd:MTH00020  342 SAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAF 421

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 160 YSFRLFYYS-MSGDNNFYSSFSFDDKG-YFISFGMIGLLIVAVFGGSLLSWIIF--------PIPFMVSL-PYYLKFLTI 228
Cdd:MTH00020  422 YSIRLIYLTfLSNTNLKKAVFFHLHEGdWNLLLPLGILALGSIFVGYLAKEMIWsfqitlppIVPLSIKLlPVFLSLGGI 501


                  ....*
gi 1273810972 229 VVVIF 233
Cdd:MTH00020  502 GLVII 506
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
 14-240 4.82e-37

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 137.60  E-value: 4.82e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  14 FLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDSQD 93
Cdd:PRK06590  283 FVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQD 362

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  94 IRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILElVCLSWINCLIFFLYFVSTGLTAAYSFRLFYYSMSGDN 173
Cdd:PRK06590  363 IRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKE 441

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 174 nfyssfsfDDKGY-------FISFGMIGLLIVAVFGG-----SLLSWIIFP-----IPFMVSLPYYLKFLTIVVVIFGSY 236
Cdd:PRK06590  442 --------KEKIHhphespaVMTLPLIVLAVLSVFAGalivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIA 513


                  ....
gi 1273810972 237 LGYL 240
Cdd:PRK06590  514 LAWL 517
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
 17-241 1.62e-36

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 135.91  E-value: 1.62e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  17 VVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRF 96
Cdd:MTH00210  280 ILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRK 359

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  97 MGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAAYSFRLFYYSMSGDNNFY 176
Cdd:MTH00210  360 MGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSK 439

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1273810972 177 SS--FSFDDKGYFISFGMIGLLIVAVFGGSL-----LSWIIFPIpfmvsLPYYLKFLTIVVVIFGSYLGYLV 241
Cdd:MTH00210  440 KEvfIGVHESSWNITFPLLLLAFGSIFVGYLgkevvLSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVI 506
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
14-172 3.59e-33

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 126.68  E-value: 3.59e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  14 FLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKD--- 90
Cdd:PRK07376  293 VIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvg 372

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  91 -----SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSwiNCLIFFLYFVSTGLTAAYSFRLF 165
Cdd:PRK07376  373 hdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMY 450


                  ....*..
gi 1273810972 166 YYSMSGD 172
Cdd:PRK07376  451 FLTFEGE 457
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 14-153 2.87e-27

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 106.24  E-value: 2.87e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  14 FLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLKD 90
Cdd:pfam00361 149 ILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVH 228

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1273810972  91 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVS 153
Cdd:pfam00361 229 TRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
ndhF CHL00025
NADH dehydrogenase subunit 5
 18-194 2.65e-26

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 107.29  E-value: 2.65e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  18 VGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNL--------K 89
Cdd:CHL00025  297 IGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspD 376

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  90 DSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILElvcLSWINCLIF-FLYFVSTGLTAAYSFRLFYYS 168
Cdd:CHL00025  377 KSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN---DSWLYSPIFaIIAWSTAGLTAFYMFRIYLLT 453

                         170       180
                  ....*....|....*....|....*..
gi 1273810972 169 MSGDNNFYS-SFSFDDKGYFISFGMIG 194
Cdd:CHL00025  454 FEGHLRVHFqNYSGKKNSSFYSISLWG 480
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
 17-136 1.13e-23

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 99.65  E-value: 1.13e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  17 VVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM-GYSKLAFFHLLTHALFKALLFMCAGSMIHNLK-DSQDI 94
Cdd:MTH00032  294 IFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDM 373

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1273810972  95 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEL 136
Cdd:MTH00032  374 RKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
 2-167 5.16e-23

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 96.75  E-value: 5.16e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   2 FSPMLDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKL---AFFHLLTHALFKALLF 78
Cdd:COG0651   262 LFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLF 341

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  79 MCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVcLSWINCLIFFLYFVSTGLTA 158
Cdd:COG0651   342 LAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTL 419


                  ....*....
gi 1273810972 159 AYSFRLFYY 167
Cdd:COG0651   420 AYFVRIFGR 428
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
 1-233 6.43e-22

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 94.21  E-value: 6.43e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMC 80
Cdd:MTH00095  216 NFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQ 295

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  81 AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGLTAAY 160
Cdd:MTH00095  296 VGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGY 375

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1273810972 161 SFRLFYysmsgdnNFYSSFSFDDKGYFISFGMIGLLIVAVFGG-SLLSWIIFPIPFMVSLPYYLKFLTIVVVIF 233
Cdd:MTH00095  376 SYRLWK-------SFFLSFSKVVNVYSSSVLMNFLSLMLVFFSvFFLWWLNFNLLNLPSLFLYLDFYVPLFYLF 442
PRK12650 PRK12650
DUF4040 family protein;
1-164 3.64e-19

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 86.25  E-value: 3.64e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPML-DTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKAL 76
Cdd:PRK12650  260 RFSPVFhDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSS 339

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  77 LFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGL 156
Cdd:PRK12650  340 LFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAAL 418

                         170
                  ....*....|..
gi 1273810972 157 TA----AYSFRL 164
Cdd:PRK12650  419 GAvftfAYSARL 430
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
 10-167 2.69e-18

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 83.39  E-value: 2.69e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  10 GFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLG---LMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIH 86
Cdd:PRK08375  269 GLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGyilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEV 348

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  87 NLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK-DLILELVCLSWINCLIFFLyfVSTGLTAAYSFRLF 165
Cdd:PRK08375  349 TYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIW 425


                  ..
gi 1273810972 166 YY 167
Cdd:PRK08375  426 YR 427
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
 14-163 3.27e-17

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 80.62  E-value: 3.27e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  14 FLLV--VGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGySKLA----FFHLLTHALFKALLFMCAGSMIHN 87
Cdd:PRK12648  271 FWIVggAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE 349

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  88 lKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDL----ILELVCLSWINCLIFFLYFVSTGLTAAYSFR 163
Cdd:PRK12648  350 -TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
 1-166 1.04e-16

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 79.20  E-value: 1.04e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKFLLVV-GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHL---LTHALFKAL 76
Cdd:PRK12644  255 RLAPGFADVPVWRPTVLVlGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAA 334

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  77 LFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELV----CLSWINCLIFFLYFV 152
Cdd:PRK12644  335 LFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVL 413

                         170
                  ....*....|....
gi 1273810972 153 STGLTAAYSFRLFY 166
Cdd:PRK12644  414 GSILTVAYSLRFLW 427
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
 15-135 3.74e-16

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 77.65  E-value: 3.74e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  15 LLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNlKDS 91
Cdd:PRK12647  262 LPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHE-TGT 340

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1273810972  92 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK12647  341 RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 160-240 8.98e-16

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 72.97  E-value: 8.98e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 160 YSFRLFYYSMSGDNNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIFPIPFMVSLPYYLKFLTIVVVIFGSYLGY 239
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80


                  .
gi 1273810972 240 L 240
Cdd:pfam06455  81 E 81
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
 15-166 8.99e-16

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 76.16  E-value: 8.99e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  15 LLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGySKL----AFFHLLTHALFKALLFMCAGSMIHNLKd 90
Cdd:PRK12667  298 LIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIG-TQLglaaALFHIINHAIAKSLLFLASGVFIHAAG- 375

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1273810972  91 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLyFVSTGLTAAYSFRLFY 166
Cdd:PRK12667  376 TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAWY 450
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
 13-166 1.20e-15

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 75.72  E-value: 1.20e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  13 KFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNlKDSQ 92
Cdd:PRK07390  285 TVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQ 363

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1273810972  93 DIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSkdlILELVCLSWINCLIFFLYFVSTGLTAAYS----FRLFY 166
Cdd:PRK07390  364 DLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVSPWLVGVLLLVNALTAFNltrvFRLVF 438
PRK12646 PRK12646
DUF4040 family protein;
1-135 1.44e-15

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 75.95  E-value: 1.44e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGF-GKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMG----------YSKL------- 62
Cdd:PRK12646  262 RFTPLLGLSNMyIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaIASIyvfvlfa 341

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1273810972  63 AFFHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK12646  342 ALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLD 413
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
 17-171 1.45e-15

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 75.73  E-value: 1.45e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  17 VVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKL----------------AFFHLLTHALFKALLFMC 80
Cdd:PRK12645  279 LVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMI 358

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  81 AGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE---------LVCLSWINCLIFFLYF 151
Cdd:PRK12645  359 VGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAW 437

                         170       180
                  ....*....|....*....|
gi 1273810972 152 VSTGLTAAYSFRLFYYSMSG 171
Cdd:PRK12645  438 VASVFTFVYSIIFIFKTFFG 457
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
 2-166 1.29e-14

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 72.82  E-value: 1.29e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   2 FSPMLDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKL---------------AFFH 66
Cdd:PRK08376  277 YGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGLAALgdpamasygeialagGIYH 356

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  67 LLTHALFKALLFMCAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLswINCLI 146
Cdd:PRK08376  357 IVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL--FNPIL 433

                         170       180
                  ....*....|....*....|
gi 1273810972 147 FFLYFVSTGLTAAYSFRLFY 166
Cdd:PRK08376  434 GVIAMIGSVLTLASFVKVFH 453
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
 10-164 1.80e-14

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 72.49  E-value: 1.80e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  10 GFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIH 86
Cdd:PRK08377  271 SVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGI 350

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1273810972  87 NLKDSQDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeLVCLSWINCLIFFLYFVSTGLTAAYSFRL 164
Cdd:PRK08377  351 TLGGTEIEKFEGLGKR-MPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
 14-135 2.47e-14

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 72.17  E-value: 2.47e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  14 FLLV--VGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSIlsMGYSK---------LAFFHLLTHALFKALLFMCAG 82
Cdd:PRK12649  278 FILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTM--YGYTTyhepglgvaAATFHLLNHATFKACLFLVAG 355

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1273810972  83 SMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK12649  356 IVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYE 407
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
 9-166 1.32e-12

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 66.76  E-value: 1.32e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   9 FGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMM---SILSMGYSKLAFFHLLTHALFKALLFMCAGSmI 85
Cdd:PRK06589  277 FAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGS-I 355

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  86 HNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLS---WINCLIFFLYFVSTGLTAAYSF 162
Cdd:PRK06589  356 YSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLL 435


                  ....
gi 1273810972 163 RLFY 166
Cdd:PRK06589  436 KILS 439
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
 12-140 2.84e-12

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 66.07  E-value: 2.84e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  12 GKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMsiLSMGYSKL----------------AFFHLLTHALFKA 75
Cdd:PRK06521  276 GVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIF--VGLGLAMVfiaygmpllaalaltaALYHLLNHALFKS 353

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1273810972  76 LLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLS 140
Cdd:PRK06521  354 LLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
 6-135 4.10e-12

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 65.36  E-value: 4.10e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   6 LDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGysklAFFHlLTHALFKALLFMCAGSmI 85
Cdd:PRK07234  239 LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-L 312

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1273810972  86 HNLKDSQDIRFMGSIVNFMPLTsvcfnVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK07234  313 PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
 11-166 4.78e-12

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 65.40  E-value: 4.78e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  11 FGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYS---KLAFFHLLTHALFKALLFMCAGSMIHN 87
Cdd:PRK08668  271 FNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR 350

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1273810972  88 LKDSQdIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTGlTAAYSFRLFY 166
Cdd:PRK08668  351 TGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIG-SFLYVFRPLA 427
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
 11-135 1.28e-11

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 63.98  E-value: 1.28e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  11 FGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL-----------------MMSILSMGYsklAFFHLLTHALF 73
Cdd:PRK08667  269 WGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIilmgiglyvifgvygldTLALLALGG---ALFHSLNHALF 345

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1273810972  74 KALLFMCAGSMIHNLKDsQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK08667  346 KSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
ND5 MTH00063
NADH dehydrogenase subunit 5; Provisional
 1-240 1.71e-11

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214414 [Multi-domain]  Cd Length: 522  Bit Score: 63.36  E-value: 1.71e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMC 80
Cdd:MTH00063  209 RYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFML 288

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  81 AGSMIHNLKDSQDIR-----FMGSIVNFMPLTSVCfnvssLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTG 155
Cdd:MTH00063  289 VGDVMSGSGGSQSSNcvyssILYGSWNLFYLFLLV-----LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVF 363

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972 156 LTAAYSFRLFyysmsgdNNFYSSFSFDDKGYFISFGMIGLLivaVFGGSLLSWIIFPIPF-MVSLPYYLKFLTIVVVIFG 234
Cdd:MTH00063  364 LSYLYSFRLC-------LILFGVKSSLSSGVRFLFFNSGLM---VFLWLFINYYVFLLLDeVVYLGVFISLVLLLVQLLG 433


                  ....*.
gi 1273810972 235 SYLGYL 240
Cdd:MTH00063  434 LLVGVL 439
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
 12-127 2.71e-11

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 62.92  E-value: 2.71e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  12 GKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLA--------------FFHLLTHALFKALL 77
Cdd:PRK08042  245 GVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVL 324

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1273810972  78 FMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGF 127
Cdd:PRK08042  325 FLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
24-134 4.52e-11

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 62.22  E-value: 4.52e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  24 FMAGLGANF---EFDLKKIIALSTLSQLGLMMSILSMGySKL----AFFHLLTHALFKALLFMCAGSMIHNLKDSqDIRF 96
Cdd:PRK12668  249 AMAVYGVFFallENDLRRLLSYHIVSQVGYMVAGIGIG-TALaingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTE 326

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1273810972  97 MGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 134
Cdd:PRK12668  327 LGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
 11-134 1.98e-10

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 60.37  E-value: 1.98e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  11 FGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGY--SKLAF----FHLLTHALFKALLFMCAGSM 84
Cdd:PRK06525  271 IGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGAL 350

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1273810972  85 IHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 134
Cdd:PRK06525  351 SYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
 11-165 9.18e-10

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 58.17  E-value: 9.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  11 FGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGYSKL--AFFHLLTHALFKALLFMCAGSMIHN 87
Cdd:COG1008   274 FAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVGVLYDR 353

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1273810972  88 LKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWIncLIFFLYFVSTGLTAAYSFRLF 165
Cdd:COG1008   354 TH-TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNP--WLAILAALGLILTAAYLLWMY 428
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
 14-135 1.06e-09

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 58.04  E-value: 1.06e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  14 FLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGYSKL--AFFHLLTHALFKALLFMCAGSMIHnLKD 90
Cdd:PRK07691  277 LILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIlVGVAMMTESGMigAIYYLIHDMIVKAALFLLIGIMIK-ITG 355

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1273810972  91 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK07691  356 TTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
 11-134 2.78e-07

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 50.97  E-value: 2.78e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  11 FGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILSMGYSKL--AFFHLLTHALFKALLFMCAGSMIHN 87
Cdd:PRK05846  276 FAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDR 355

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1273810972  88 LKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 134
Cdd:PRK05846  356 LH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
PRK08168 PRK08168
NADH-quinone oxidoreductase subunit L;
1-83 7.17e-07

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236171 [Multi-domain]  Cd Length: 516  Bit Score: 49.70  E-value: 7.17e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTFGFGKFLLV-VGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:PRK08168  251 RFAPLLEQAPPARWLLVlVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFL 330


                  ....
gi 1273810972  80 CAGS 83
Cdd:PRK08168  331 SASE 334
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
 10-135 7.58e-07

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 49.58  E-value: 7.58e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  10 GFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM----GYSKlAFFHLLTHALFKALLFMCAGsMI 85
Cdd:PRK12665  271 GLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALstvaGLSG-AIYYVAHHITVQTTLFLVVG-LI 348

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1273810972  86 HNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK12665  349 ERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
 5-130 1.36e-06

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 48.58  E-value: 1.36e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   5 MLDTFGFGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMG-YSKL--AFFHLLTHALFKALLFMCA 81
Cdd:PRK12662  272 VFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVS 351

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1273810972  82 GSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 130
Cdd:PRK12662  352 GSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
 12-134 2.73e-06

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 48.00  E-value: 2.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  12 GKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGySKLAFF----HLLTHALFKALLFMCAGSMIHN 87
Cdd:PRK06458  281 GRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGNVLQK 359

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1273810972  88 lKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 134
Cdd:PRK06458  360 -YGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
 11-166 6.93e-06

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 46.67  E-value: 6.93e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  11 FGKFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAF---FHLLTHALFKALLFMCAGsMIHN 87
Cdd:PRK08676  272 FSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHR 350

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  88 LKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL-ELVCLS-WINCLIFFLYFVstgltAAYSFRLF 165
Cdd:PRK08676  351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLL-----AASSFAIF 425


                  .
gi 1273810972 166 Y 166
Cdd:PRK08676  426 L 426
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
15-134 1.00e-05

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 46.10  E-value: 1.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  15 LLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKL---AFFHLLTHALFKALLFMCAGSMIHnLKDS 91
Cdd:PRK12663  275 LATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGY 353

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1273810972  92 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 134
Cdd:PRK12663  354 RSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
PRK08601 PRK08601
NADH dehydrogenase subunit 5; Validated
 1-83 4.74e-05

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 236310 [Multi-domain]  Cd Length: 509  Bit Score: 44.26  E-value: 4.74e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972   1 RFSPMLDTfGFGKFLLVVGCMTMFMAGLGANF-EFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFM 79
Cdd:PRK08601  255 RFSPLFHD-DIAQILLLIFASISVLIGTGISLvQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFL 333


                  ....
gi 1273810972  80 CAGS 83
Cdd:PRK08601  334 QSGS 337
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
 13-137 2.53e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 41.73  E-value: 2.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  13 KFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGySKLAFFHLLTHALFKALLFMcagsMIHNLKdSQ 92
Cdd:MTH00112  152 TLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TK 225

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1273810972  93 DIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL-ELV 137
Cdd:MTH00112  226 TLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILqELT 271
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
15-135 3.54e-04

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 41.17  E-value: 3.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  15 LLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMG--YSKLA-FFHLLTHALFKALLFMCAGSmIHNLKDS 91
Cdd:PRK06277  269 LIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGtpLGIVAgIFHAINHVIYKSALFLGAGI-VSYRTKT 347

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1273810972  92 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK06277  348 SNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
 15-130 4.27e-04

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 41.26  E-value: 4.27e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  15 LLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSIL----SMGYSkLAFFHLLTHALFKALLFMCAGSMIHNLKD 90
Cdd:COG1007   272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLaagtPLGVS-AALFYLLAYLFMNLGAFAVILLLSRKGGE 350

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1273810972  91 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 130
Cdd:COG1007   351 AEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
ND2 MTH00160
NADH dehydrogenase subunit 2; Provisional
 13-211 9.59e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214442 [Multi-domain]  Cd Length: 335  Bit Score: 36.72  E-value: 9.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  13 KFLLVVGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLKDSQ 92
Cdd:MTH00160  144 NFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLF 223

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810972  93 DIRFMGSIVNFMpltsvcFNVSSLSLCGMPFLAGFYSKDLILELVCLSWINCLIFFLYFVSTgLTAAYSFRLFYYSMSGd 172
Cdd:MTH00160  224 NSNNKSKKIKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRISYSSLML- 295

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1273810972 173 NNFYSSFSFDDKGYFISFGMIGLLIVAVFGGSLLSWIIF 211
Cdd:MTH00160  296 NYNKNKWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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