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Conserved domains on  [gi|1273811316|gb|ATQ39691|]
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NADH dehydrogenase subunit I, partial (mitochondrion) [Betiscoides sp. B39_bk_83]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06076 super family cl00469
NADH-quinone oxidoreductase subunit NuoH;
6-66 3.30e-29

NADH-quinone oxidoreductase subunit NuoH;


The actual alignment was detected with superfamily member MTH00193:

Pssm-ID: 469782  Cd Length: 306  Bit Score: 104.47  E-value: 3.30e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1273811316   6 LFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKE 61
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-66 3.30e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 104.47  E-value: 3.30e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1273811316   6 LFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKE 61
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-66 3.74e-16

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 69.77  E-value: 3.74e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1273811316   5 DLFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKE 68
NADHdh pfam00146
NADH dehydrogenase;
14-66 1.86e-15

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 67.88  E-value: 1.86e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1273811316  14 ILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKE 55
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-66 3.30e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 104.47  E-value: 3.30e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1273811316   6 LFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKE 61
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 8-66 1.80e-24

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 92.02  E-value: 1.80e-24
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1273811316   8 MFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKE 60
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-66 5.01e-24

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 90.70  E-value: 5.01e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273811316   7 FMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKE 60
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 6-66 1.07e-21

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 84.95  E-value: 1.07e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1273811316   6 LFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKE 64
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 2-66 1.25e-21

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 84.66  E-value: 1.25e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1273811316   2 MLYDLFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKE 65
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-66 2.76e-21

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 83.90  E-value: 2.76e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1273811316   6 LFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKE 64
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-66 3.32e-21

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 83.52  E-value: 3.32e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1273811316   8 MFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKE 59
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 4-66 9.18e-20

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 79.63  E-value: 9.18e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1273811316   4 YDLFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKE 63
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 10-66 1.18e-19

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 79.18  E-value: 1.18e-19
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1273811316  10 ILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKE 61
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-66 1.31e-19

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 79.02  E-value: 1.31e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1273811316   6 LFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKE 61
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-66 9.08e-18

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 74.39  E-value: 9.08e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1273811316   2 MLYDLFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKE 65
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 9-66 1.55e-17

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 73.66  E-value: 1.55e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1273811316   9 FILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKE 62
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-66 3.74e-16

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 69.77  E-value: 3.74e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1273811316   5 DLFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKE 68
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-66 1.60e-15

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 68.22  E-value: 1.60e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1273811316   6 LFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKE 61
NADHdh pfam00146
NADH dehydrogenase;
14-66 1.86e-15

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 67.88  E-value: 1.86e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1273811316  14 ILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKE 55
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-65 4.73e-14

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 63.79  E-value: 4.73e-14
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1273811316   7 FMFILNFILLVICVLIsVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*K 65
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVK 59
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-66 4.95e-14

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 64.06  E-value: 4.95e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1273811316   6 LFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKE 69
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 12-66 1.27e-12

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 59.91  E-value: 1.27e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1273811316  12 NFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKE 55
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-66 1.84e-11

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 56.95  E-value: 1.84e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1273811316   1 MMLYDLFMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGLVGIPQPLRDAVKLI*KE 66
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKE 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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