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Conserved domains on  [gi|1275874108|gb|ATU74735|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Formosatettix qinlingensis]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-90 2.57e-18

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 72.49  E-value: 2.57e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  3 LMLLFFFMIFLSGLYIFSSFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNYEDYFLIIFLILSVCEGALGLSVLVSLVRS 82
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1275874108 83 CGNDYVFS 90
Cdd:MTH00162  82 HGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-90 2.57e-18

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 72.49  E-value: 2.57e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  3 LMLLFFFMIFLSGLYIFSSFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNYEDYFLIIFLILSVCEGALGLSVLVSLVRS 82
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1275874108 83 CGNDYVFS 90
Cdd:MTH00162  82 HGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-88 3.83e-03

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 33.69  E-value: 3.83e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  3 LMLLFFFMIFLSGLYIFSsFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNY--EDYFLIIFLILSVCEGALGLSVLVSLV 80
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLL-LRRNLLRVLLSLELMLNAVNLALVLFGRLTADplPQALILTAIVIAAAEAAVGLALLVRIY 79


                 ....*...
gi 1275874108 81 RSCGNDYV 88
Cdd:pfam00420 80 RTHGTDDV 87
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-90 2.57e-18

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 72.49  E-value: 2.57e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  3 LMLLFFFMIFLSGLYIFSSFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNYEDYFLIIFLILSVCEGALGLSVLVSLVRS 82
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1275874108 83 CGNDYVFS 90
Cdd:MTH00162  82 HGNDYFSS 89
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-96 9.59e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 50.61  E-value: 9.59e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  1 MSLMLLFFFMIFLSGLYIFSSFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNYEDYFLIIFLILSVCEGALGLSVLVSLV 80
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLI 81

                         90
                 ....*....|....*.
gi 1275874108 81 RSCGNDYVFSSSLFVC 96
Cdd:MTH00149  82 RLHGNDYVSSLSSLKF 97
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 1-96 8.97e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 45.74  E-value: 8.97e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  1 MSLMLLFFFMIFLSGLYIFSSFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNYEDYFLIIFLILSVCEGALGLSVLVSLV 80
Cdd:MTH00188   2 FFSMILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLI 81

                         90
                 ....*....|....*.
gi 1275874108 81 RSCGNDYVFSSSLFVC 96
Cdd:MTH00188  82 RSHGSDYVSSLNLIKC 97
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-96 1.20e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 42.91  E-value: 1.20e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  1 MSLMLLFFFMIFLSGLYIFSSFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNYEDYFL--IIFLILSVCEGALGLSVLVS 78
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1275874108 79 LVRSCGNDYVFSSSLFVC 96
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-96 3.84e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 41.51  E-value: 3.84e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  1 MSLMLLFFFMIFLSGLYIFSSFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNYEDYFL--IIFLILSVCEGALGLSVLVS 78
Cdd:MTH00067   1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVA 80

                         90
                 ....*....|....*...
gi 1275874108 79 LVRSCGNDYVFSSSLFVC 96
Cdd:MTH00067  81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-96 3.57e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 36.45  E-value: 3.57e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  1 MSLMLLFFFMIFLSGLYIFSSFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNYEDYFL--IIFLILSVCEGALGLSVLVS 78
Cdd:MTH00107   1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMmpIILLVFAACEAAVGLALLVM 80

                         90
                 ....*....|....*...
gi 1275874108 79 LVRSCGNDYVFSSSLFVC 96
Cdd:MTH00107  81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-96 7.62e-04

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 35.50  E-value: 7.62e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  1 MSLMLLFFFMIFLSGLYIFSSFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFN-YEDYFLIIFLILSVCEGALGLSVLVSL 79
Cdd:MTH00013   1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANqVNGMLAIVLLTFGACEASLGLSLLVLM 80

                         90
                 ....*....|....*..
gi 1275874108 80 VRSCGNDYVFSSSLFVC 96
Cdd:MTH00013  81 TRSYGNDMLKSLTSNKC 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-88 3.83e-03

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 33.69  E-value: 3.83e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874108  3 LMLLFFFMIFLSGLYIFSsFRKHLLLMLLGLEYMVLSMFYYMFLYLSFFNY--EDYFLIIFLILSVCEGALGLSVLVSLV 80
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLL-LRRNLLRVLLSLELMLNAVNLALVLFGRLTADplPQALILTAIVIAAAEAAVGLALLVRIY 79


                 ....*...
gi 1275874108 81 RSCGNDYV 88
Cdd:pfam00420 80 RTHGTDDV 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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