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Conserved domains on  [gi|1275874110|gb|ATU74737|]
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cytochrome b (mitochondrion) [Formosatettix qinlingensis]

Protein Classification

cytochrome b/b6( domain architecture ID 11475928)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 648.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  12 IKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  92 FICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 172 DNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVLMLISLMYPYIM 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 252 GDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPINQIMFWIMMV 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1275874110 332 TVILLTWVGKQPVEEPYITTGQILTMMYFTFFMMN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 648.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  12 IKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  92 FICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 172 DNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVLMLISLMYPYIM 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 252 GDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPINQIMFWIMMV 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1275874110 332 TVILLTWVGKQPVEEPYITTGQILTMMYFTFFMMN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
12-363 4.29e-115

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 340.23  E-value: 4.29e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  12 IKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMF 91
Cdd:COG1290    20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  92 FICLYLHVGRGLYYNSFllKE----TWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWG 167
Cdd:COG1290   100 FAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 168 GFAVDNPTLSRFFSLH-FILPFVIAALTMIHLLFLHQSGSNNPLG----MNSNSEKIPFHPFFSIKDSITMLLLLMVLML 242
Cdd:COG1290   178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 243 ISLMYPyiMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIP--NKLGGVIALAMSIAITLIMPFYNKANFQGNQFYP 320
Cdd:COG1290   258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1275874110 321 INQIMFWIMMVTVILLTWVGKQPveEPYITTGQILTMMYFTFF 363
Cdd:COG1290   336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFF 376
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 2.30e-91

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 272.70  E-value: 2.30e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  10 PLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  90 MFFICLYLHVGRGLYYNSF--LLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1275874110 168 GFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 3.02e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 249.22  E-value: 3.02e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  19 LMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMFFICLYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  99 VGRGLYYNSF--LLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1275874110 177 SRFFSLHFILPFVIAALTMIHLLFLHQSG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-336 4.67e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 54.80  E-value: 4.67e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874110 259 PANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKAN-FQGNQFYPINQIMFWIMMVTVILL 336
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNkFQNPFRRPVATTVFLFGTVVALWL 143
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 648.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  12 IKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  92 FICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 172 DNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVLMLISLMYPYIM 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 252 GDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPINQIMFWIMMV 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1275874110 332 TVILLTWVGKQPVEEPYITTGQILTMMYFTFFMMN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00145
cytochrome b; Provisional
 1-378 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 603.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   1 MKTPLRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLI 80
Cdd:MTH00145    1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  81 RTLHMNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00145   81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVL 240
Cdd:MTH00145  161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 241 MLISLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYP 320
Cdd:MTH00145  241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1275874110 321 INQIMFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFMMNTWINKMWDQTIM 378
Cdd:MTH00145  321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILD 378
CYTB MTH00119
cytochrome b; Provisional
 1-365 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 597.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   1 MKTPLRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLI 80
Cdd:MTH00119    1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  81 RTLHMNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00119   81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVL 240
Cdd:MTH00119  161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 241 MLISLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYP 320
Cdd:MTH00119  241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1275874110 321 INQIMFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFMM 365
Cdd:MTH00119  321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
CYTB MTH00191
cytochrome b; Provisional
 5-369 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 590.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   5 LRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLH 84
Cdd:MTH00191    1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  85 MNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQW 164
Cdd:MTH00191   81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 165 IWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVLMLIS 244
Cdd:MTH00191  161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 245 LMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPINQI 324
Cdd:MTH00191  241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1275874110 325 MFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFMMNTWI 369
Cdd:MTH00191  321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00100
cytochrome b; Provisional
 3-361 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 584.68  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   3 TPLRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRT 82
Cdd:MTH00100    2 TNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRY 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  83 LHMNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIV 162
Cdd:MTH00100   82 LHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 163 QWIWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVLML 242
Cdd:MTH00100  162 EWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLML 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 243 ISLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPIN 322
Cdd:MTH00100  242 LVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLS 321

                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1275874110 323 QIMFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFT 361
Cdd:MTH00100  322 QCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFL 360
CYTB MTH00131
cytochrome b; Provisional
 5-364 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 580.84  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   5 LRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLH 84
Cdd:MTH00131    4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  85 MNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQW 164
Cdd:MTH00131   84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 165 IWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVLMLIS 244
Cdd:MTH00131  164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 245 LMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPINQI 324
Cdd:MTH00131  244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1275874110 325 MFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFM 364
Cdd:MTH00131  324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFL 363
CYTB MTH00016
cytochrome b; Validated
 1-378 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 577.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   1 MKTPLRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLI 80
Cdd:MTH00016    1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  81 RTLHMNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00016   81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVL 240
Cdd:MTH00016  161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 241 MLISLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYP 320
Cdd:MTH00016  241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1275874110 321 INQIMFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFMMNTWINKMWDQTIM 378
Cdd:MTH00016  321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
CYTB MTH00074
cytochrome b; Provisional
 1-378 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 573.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   1 MKTPLRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLI 80
Cdd:MTH00074    1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  81 RTLHMNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00074   81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVL 240
Cdd:MTH00074  161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 241 MLISLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYP 320
Cdd:MTH00074  241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1275874110 321 INQIMFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFMMNTWINKMWDQTIM 378
Cdd:MTH00074  321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLL 378
CYTB MTH00034
cytochrome b; Validated
 4-364 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 557.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   4 PLRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTL 83
Cdd:MTH00034    3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  84 HMNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQ 163
Cdd:MTH00034   83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 164 WIWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVLMLI 243
Cdd:MTH00034  163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 244 SLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPINQ 323
Cdd:MTH00034  243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1275874110 324 IMFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFM 364
Cdd:MTH00034  323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFL 363
CYTB MTH00224
cytochrome b; Provisional
 1-377 2.64e-176

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 495.21  E-value: 2.64e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   1 MKTPLRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLI 80
Cdd:MTH00224    1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  81 RTLHMNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00224   81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVL 240
Cdd:MTH00224  161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 241 MLISLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYP 320
Cdd:MTH00224  241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1275874110 321 INQIMFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFMMNTWINKMWDQTI 377
Cdd:MTH00224  321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLL 377
CYTB MTH00022
cytochrome b; Validated
 4-365 7.28e-172

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 483.82  E-value: 7.28e-172
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   4 PLRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTL 83
Cdd:MTH00022    2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  84 HMNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQ 163
Cdd:MTH00022   82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 164 WIWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVLMLI 243
Cdd:MTH00022  162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 244 SLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPINQ 323
Cdd:MTH00022  242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1275874110 324 IMFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFMM 365
Cdd:MTH00022  322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
CYTB MTH00053
cytochrome b; Provisional
 1-365 9.69e-167

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 471.11  E-value: 9.69e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110   1 MKTPLRKNHPLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLI 80
Cdd:MTH00053    1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  81 RTLHMNGASMFFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00053   81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVL 240
Cdd:MTH00053  161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 241 MLISLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYP 320
Cdd:MTH00053  241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1275874110 321 INQIMFWIMMVTVILLTWVGKQPVEEPYITTGQILTMMYFTFFMM 365
Cdd:MTH00053  321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
CYTB MTH00033
cytochrome b; Provisional
 17-365 5.62e-128

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 372.73  E-value: 5.62e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  17 NSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMFFICLY 96
Cdd:MTH00033   13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  97 LHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTL 176
Cdd:MTH00033   93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 177 SRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDsITMLLLLMVLMLISLMYPYI---MGD 253
Cdd:MTH00033  173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKD-ILGFLILFGVFVIIGIEPRIetlLQD 251

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 254 PDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPINQIMFWIMMVTV 333
Cdd:MTH00033  252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1275874110 334 ILLTWVGKQPV-EEPYITTGQILTMMYFTFFMM 365
Cdd:MTH00033  332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
CYTB MTH00086
cytochrome b; Provisional
 13-371 1.51e-123

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 360.41  E-value: 1.51e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  13 KIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMFF 92
Cdd:MTH00086    1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  93 ICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVD 172
Cdd:MTH00086   81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 173 NPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSITmLLLLMVLMLISLMYPYIMG 252
Cdd:MTH00086  161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFYPFNLG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 253 DPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYnkaNFQGNQFYPINQIMFWIMMVT 332
Cdd:MTH00086  240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFV---NNYTSCLNKLNKFLVFSFIVV 316

                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1275874110 333 VILLTWVGKQPVEEPYITTGQILTMMYFTFFMMNTWINK 371
Cdd:MTH00086  317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLMLFLFY 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
12-363 4.29e-115

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 340.23  E-value: 4.29e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  12 IKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMF 91
Cdd:COG1290    20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  92 FICLYLHVGRGLYYNSFllKE----TWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWG 167
Cdd:COG1290   100 FAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 168 GFAVDNPTLSRFFSLH-FILPFVIAALTMIHLLFLHQSGSNNPLG----MNSNSEKIPFHPFFSIKDSITMLLLLMVLML 242
Cdd:COG1290   178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 243 ISLMYPyiMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIP--NKLGGVIALAMSIAITLIMPFYNKANFQGNQFYP 320
Cdd:COG1290   258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1275874110 321 INQIMFWIMMVTVILLTWVGKQPveEPYITTGQILTMMYFTFF 363
Cdd:COG1290   336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFF 376
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 2.30e-91

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 272.70  E-value: 2.30e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  10 PLIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  90 MFFICLYLHVGRGLYYNSF--LLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1275874110 168 GFAVDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 11-365 2.37e-85

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 263.00  E-value: 2.37e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  11 LIKIINNSLMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASM 90
Cdd:MTH00046    1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  91 FFICLYLHVGRGLYYNSFLLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFA 170
Cdd:MTH00046   81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 171 VDNPTLSRFFSLHFILPFVIAALTMIHLLFLHQSGSNNPL-GMNSNSEKIPFHPFFSIKDSITMLLLLMVLMLISLMYPY 249
Cdd:MTH00046  161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLfSSNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 250 IMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIaLAMSIAITLIMPfynkaNFQGNQFYPI-NQIMFWI 328
Cdd:MTH00046  241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVP-----TFNGSSVYSVwRQVNFWL 314

                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1275874110 329 MMVTVILLTWVGKQPVEEPYITTGQILTMMyFTFFMM 365
Cdd:MTH00046  315 IVSLFFSLSYLGGCHPEYPYLLISQLFSVL-MVLLLF 350
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 3.02e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 249.22  E-value: 3.02e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  19 LMDLPTPMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMFFICLYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  99 VGRGLYYNSF--LLKETWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1275874110 177 SRFFSLHFILPFVIAALTMIHLLFLHQSG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 208-354 9.80e-44

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 148.56  E-value: 9.80e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 208 NPLGMNSNSEKIPFHPFFSIKDSITMLLLLMVLMLISLMYPYIMGDPDNFIPANPLVTPPQNQPEWYFLFAYAILRSIPN 287
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1275874110 288 KLGGVIALAMSIAITLIMPFYNKANFQgNQFYPINQIMFWIMMVTVILLTWVGKQPVEEPYITTGQI 354
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
PRK03735 PRK03735
cytochrome b6; Provisional
 34-210 1.62e-39

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 140.23  E-value: 1.62e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  34 FGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMFFICLYLHVGRGLYYNSFLLKE- 112
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 113 -TWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTLSRFFSLH-FILPFVI 190
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170       180
                  ....*....|....*....|
gi 1275874110 191 AALTMIHLLFLHQSGSNNPL 210
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGPL 223
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
89-231 2.73e-39

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 137.76  E-value: 2.73e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  89 SMFFICLYLHVGRGLYYNSFLLKE--TWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIW 166
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874110 167 GGFAVDNPTLSRFFSLHF-ILPFVIAALTMIHLLFLHQSGSNNPLGMNSNSEKIPFHPFFSIKDSI 231
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLL 146
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
259-359 5.22e-39

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 134.53  E-value: 5.22e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 259 PANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQFYPINQIMFWIMMVTVILLTW 338
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1275874110 339 VGKQPVEEPYITTGQILTMMY 359
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
petB CHL00070
cytochrome b6
 25-210 1.08e-33

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 124.45  E-value: 1.08e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110  25 PMNISMWWNFGSLLGMCLMIQIITGLFLAMHYTADIEMAFKSVIHICRDVNNGWLIRTLHMNGASMFFICLYLHVGRgLY 104
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR-VY 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 105 YNSFLLKE---TWTVGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTLSRFFS 181
Cdd:CHL00070  106 LTGGFKKPrelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYS 185

                         170       180       190
                  ....*....|....*....|....*....|
gi 1275874110 182 LH-FILPFVIAALTMIHLLFLHQSGSNNPL 210
Cdd:CHL00070  186 LHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
petD CHL00058
cytochrome b6/f complex subunit IV
 248-336 3.52e-10

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 58.09  E-value: 3.52e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 248 PYIMGDPdnfipANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKANFQGNQF-YPINQIMF 326
Cdd:CHL00058   59 PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPVATTVF 133

                          90
                  ....*....|
gi 1275874110 327 WIMMVTVILL 336
Cdd:CHL00058  134 LIGTAVALWL 143
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-336 4.67e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 54.80  E-value: 4.67e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874110 259 PANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAMSIAITLIMPFYNKAN-FQGNQFYPINQIMFWIMMVTVILL 336
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNkFQNPFRRPVATTVFLFGTVVALWL 143
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 248-346 5.48e-08

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 51.72  E-value: 5.48e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874110 248 PYIMGDPdnfipANPLVTPPQNQPEWYFLFAYAILRSIPNKLGGVIALAmSIAITLIM-PFYNKAN-FQGNQFYPINQIM 325
Cdd:COG5679    60 PAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMA-AIPLGLMLvPFIENVNkFQNPFRRPVATAV 133

                          90       100
                  ....*....|....*....|.
gi 1275874110 326 FWIMMVTVILLTWVGKQPVEE 346
Cdd:COG5679   134 FLFGTLVTLWLGIGAALPIDK 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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