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Conserved domains on  [gi|1275874111|gb|ATU74738|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Formosatettix qinlingensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
19-309 1.20e-131

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 376.42  E-value: 1.20e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:MTH00193   14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY--D 176
Cdd:MTH00193   94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYqkY 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 177 IWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYDSLF 256
Cdd:MTH00193  174 IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1275874111 257 FFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00193  254 FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
19-309 1.20e-131

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 376.42  E-value: 1.20e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:MTH00193   14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY--D 176
Cdd:MTH00193   94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYqkY 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 177 IWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYDSLF 256
Cdd:MTH00193  174 IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1275874111 257 FFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00193  254 FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
20-301 6.78e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 290.53  E-value: 6.78e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY- 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFg 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 -VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY-- 175
Cdd:pfam00146  89 pGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAqa 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 176 DIWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGG----- 250
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1275874111 251 -DYDSLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFF 301
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
19-296 3.86e-95

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 284.33  E-value: 3.86e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:COG1005    21 FLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPF 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 --VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY- 175
Cdd:COG1005   101 gpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAq 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 176 --DIWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYD 253
Cdd:COG1005   181 agGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLG 260
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1275874111 254 ------------SLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVAL 296
Cdd:COG1005   261 pfpilplgglpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
19-309 1.20e-131

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 376.42  E-value: 1.20e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:MTH00193   14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY--D 176
Cdd:MTH00193   94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYqkY 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 177 IWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYDSLF 256
Cdd:MTH00193  174 IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1275874111 257 FFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00193  254 FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
19-307 8.29e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 333.54  E-value: 8.29e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:MTH00225   13 CLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPS 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYYD-- 176
Cdd:MTH00225   93 MFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQky 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 177 IWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYD--S 254
Cdd:MTH00225  173 FWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVtiD 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1275874111 255 LFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKI 307
Cdd:MTH00225  253 LFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
19-305 3.06e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 332.22  E-value: 3.06e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:MTH00143   13 CVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPS 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIF--IYYD 176
Cdd:MTH00143   93 YFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEIseSQFS 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 177 IWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYD--- 253
Cdd:MTH00143  173 VWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVlfl 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1275874111 254 --SLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGL 305
Cdd:MTH00143  253 lgGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
19-309 1.42e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 315.70  E-value: 1.42e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:MTH00218   14 PVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPL 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY--D 176
Cdd:MTH00218   94 PFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTqeT 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 177 IWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYDSLF 256
Cdd:MTH00218  174 IWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTIN 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1275874111 257 FFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00218  254 LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
20-296 1.30e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 303.36  E-value: 1.30e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPYV 99
Cdd:MTH00111   18 ILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 100 TFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY--DI 177
Cdd:MTH00111   98 FPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTqePL 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 178 WLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYDS--- 254
Cdd:MTH00111  178 WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNlpp 257
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1275874111 255 -LF---FFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVAL 296
Cdd:MTH00111  258 eLFtinLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
20-309 1.78e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 302.70  E-value: 1.78e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPYV 99
Cdd:MTH00104   13 ILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMP 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 100 TFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYYD--I 177
Cdd:MTH00104   93 YPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQehL 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 178 WLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYD---- 253
Cdd:MTH00104  173 WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNpymp 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874111 254 ---SLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00104  253 elyTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
20-309 5.90e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 301.91  E-value: 5.90e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPYV 99
Cdd:MTH00134   19 VLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 100 TFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIF--IYYDI 177
Cdd:MTH00134   99 YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFntAQESI 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 178 WLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYDSLF- 256
Cdd:MTH00134  179 WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLp 258
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874111 257 ------FFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00134  259 elttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
20-311 8.84e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 301.15  E-value: 8.84e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPYV 99
Cdd:MTH00071   18 VLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 100 TFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIY--YDI 177
Cdd:MTH00071   98 NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTtqEFM 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 178 WLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYD---- 253
Cdd:MTH00071  178 WLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNhlqp 257
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1275874111 254 ---SLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILFFI 311
Cdd:MTH00071  258 elsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
20-312 1.99e-100

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 297.66  E-value: 1.99e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPYV 99
Cdd:MTH00040   17 VLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVP 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 100 TFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY--DI 177
Cdd:MTH00040   97 TPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSqnGS 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 178 WLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGD------ 251
Cdd:MTH00040  177 WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGspfnei 256
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1275874111 252 --YDSLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILFFIF 312
Cdd:MTH00040  257 fpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNIL 319
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
20-309 3.18e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 294.34  E-value: 3.18e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPYV 99
Cdd:MTH00195   15 VLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSP 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 100 TFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYYD--I 177
Cdd:MTH00195   95 FGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQgfS 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 178 WLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDyDSLFF 257
Cdd:MTH00195  175 WVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG-GTIIV 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1275874111 258 FLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00195  254 ALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
NADHdh pfam00146
NADH dehydrogenase;
20-301 6.78e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 290.53  E-value: 6.78e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY- 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFg 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 -VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY-- 175
Cdd:pfam00146  89 pGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAqa 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 176 DIWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGG----- 250
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1275874111 251 -DYDSLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFF 301
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
19-296 3.86e-95

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 284.33  E-value: 3.86e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:COG1005    21 FLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPF 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 --VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY- 175
Cdd:COG1005   101 gpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAq 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 176 --DIWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYD 253
Cdd:COG1005   181 agGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLG 260
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1275874111 254 ------------SLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVAL 296
Cdd:COG1005   261 pfpilplgglpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
19-309 1.08e-88

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 267.42  E-value: 1.08e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:MTH00010   15 MALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPH 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYYDI- 177
Cdd:MTH00010   95 KHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYs 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 178 WLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFG----GDYD 253
Cdd:MTH00010  175 WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfipsIFIS 254
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874111 254 SLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00010  255 DLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
20-296 4.12e-87

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 263.98  E-value: 4.12e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPYV 99
Cdd:PRK06076   23 VLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFG 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 100 TFFCSLDL--GFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYY-- 175
Cdd:PRK06076  103 PELVIADLnvGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAqf 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 176 DIWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYD-- 253
Cdd:PRK06076  183 LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPpf 262
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1275874111 254 --------SLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVAL 296
Cdd:PRK06076  263 plgggipgAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
20-309 3.01e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 259.27  E-value: 3.01e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPYV 99
Cdd:MTH00054   15 LLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYG 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 100 T--FFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMG--IFIYY 175
Cdd:MTH00054   95 EgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTeiVLAQK 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 176 DIWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGG----- 250
Cdd:MTH00054  175 NIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGwlvis 254
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1275874111 251 -----DYDSLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00054  255 gptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGF 318
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
20-305 2.27e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 256.97  E-value: 2.27e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPYV 99
Cdd:MTH00216   19 LLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYE 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 100 --TFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYYD- 176
Cdd:MTH00216   99 rgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQn 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 177 --IWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGG---- 250
Cdd:MTH00216  179 ngIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGwlsp 258
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874111 251 ----DYDSLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGL 305
Cdd:MTH00216  259 ikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
20-309 4.16e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 228.75  E-value: 4.16e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLV--FP 97
Cdd:MTH00029   20 LLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIvtMD 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  98 YVTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMG--IFIYY 175
Cdd:MTH00029  100 QGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISeiVISQR 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 176 DIWLVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGG----- 250
Cdd:MTH00029  180 SVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGwlspl 259
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1275874111 251 ------------------DYDSLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKILF 309
Cdd:MTH00029  260 dgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGF 336
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
19-307 2.85e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 196.27  E-value: 2.85e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:MTH00090    8 FILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPY 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFIlsgCYNMGIFIYYdiw 178
Cdd:MTH00090   88 FFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIML---HNNSFSFVSS--- 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 179 LVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGgdydslfFF 258
Cdd:MTH00090  162 FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-------FS 234
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1275874111 259 LKMSFISFS-FLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFFGLKI 307
Cdd:MTH00090  235 FLMLFLIFSlLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
19-303 1.03e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 164.33  E-value: 1.03e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  19 MVLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFPY 98
Cdd:MTH00058   13 IILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGS 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  99 VTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYYDIW 178
Cdd:MTH00058   93 YYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWL 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 179 LVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFFGGDYDSLFFF 258
Cdd:MTH00058  173 SVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIMLL 252
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1275874111 259 LKMSFisfsFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFF 303
Cdd:MTH00058  253 FHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
20-310 6.34e-36

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 132.38  E-value: 6.34e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  20 VLLSVAFLTLLERSVLGYIQIRKGPNKVGYWGILQPFGDAIKLFSKEQVLPRISNYMLYYFSPVFSLFLALFIWLVFP-- 97
Cdd:CHL00032   40 ITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPfg 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  98 YVTFFCSLDLGFLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYN-MGI----- 171
Cdd:CHL00032  120 YHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLStVDIveaqs 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 172 ---FIYYDIWLVIICFplfLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEYAMIIFMSFMIVLFFF 248
Cdd:CHL00032  200 kygFWGWNLWRQPIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYL 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 249 GG-----DYDSLFFFLKMS------------FI----SFSFLWV----RGTLPRYRYDKLMYLAWSGFLPVALNYLFFFF 303
Cdd:CHL00032  277 GGwnlsiPYIFIPELFEINktggvfgttigiFItlakTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTT 356

                  ....*..
gi 1275874111 304 GLKILFF 310
Cdd:CHL00032  357 SFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
26-303 7.43e-28

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 109.50  E-value: 7.43e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111  26 FLTLLERSVLGYIQIRKGPnkvgywGILQPFGDAIKLFSKEQVLPRISNyMLYYFSPVFSLFLALFIWLVFPYVTFFCSL 105
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLAALLVPVLTTGPPL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 106 DLG--FLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSVFILSGCYNMGIFIYYDIW----- 178
Cdd:COG0650    93 SFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAhgpll 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874111 179 LVIICFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVSFALIFLAEY-AMIIFMSFMIVLFFFGG-----DY 252
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAAlKLFVLLSLFVNLFLPWGialtlLL 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1275874111 253 DSLFFFLKMSFISFSFLWVRGTLPRYRYDKLMYLAWSGFLPVALNYLFFFF 303
Cdd:COG0650   253 ALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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