|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-336 |
8.45e-80 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 246.27 E-value: 8.45e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 1 MNKAPMKMLFIILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSITSLMI 80
Cdd:MTH00160 1 MMMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 81 YDYPYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILSYLeITQKLVELFIISSALIGAI 160
Cdd:MTH00160 81 NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL-INNNFIIIIIILSAIIGAI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 161 MGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNLALS 240
Cdd:MTH00160 160 GGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLN 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 241 FLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMSAGLISSQENSWHLNNMLNKPLDNLaSYL 320
Cdd:MTH00160 240 LLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLIL-NFL 318
|
330
....*....|....*.
gi 1275874127 321 NLLSTLGIILSSVLFL 336
Cdd:MTH00160 319 SFISLFGLILSSLLFL 334
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
24-279 |
5.20e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 110.48 E-value: 5.20e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 24 SNNWLGIWMGLEINLLSFIPLITYNKGS-NMNSSGIKYFIVQSIASITMLTSI-----------------TSLMIYDYPY 85
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGIslmynytgtlsfdelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 86 VTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIIL-MTWQKIAPMLIL-------SYLEITQKLVELFIISSALI 157
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIrrsllylPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 158 GAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTI----WMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMN 233
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1275874127 234 KFNL-----ALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISS 279
Cdd:pfam00361 241 TMPIlalvfLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-294 |
1.36e-21 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 94.80 E-value: 1.36e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 8 MLFIILmsqGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNS-SGIKYFIVQSIASITML------------TS 74
Cdd:COG1007 108 LLFATL---GMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSeAALKYFLLGALSSGFLLygisllygatgsLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 75 ITSLM------IYDYPYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLIL---------SY 139
Cdd:COG1007 185 LAGIAaalaagGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafpGL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 140 LEITQKLVELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIW----MIYFLTYTLMT--TLISISFK 213
Cdd:COG1007 265 AADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGvsaaLFYLLAYLFMNlgAFAVILLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 214 SNNIFMINEIYlnkNFNKMNK------FNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYM 287
Cdd:COG1007 345 SRKGGEAEEIE---DLAGLARrspllaLAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYL 421
|
330
....*....|.
gi 1275874127 288 K----MFMSAG 294
Cdd:COG1007 422 RvvkaMYFDEP 432
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-335 |
8.90e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 83.84 E-value: 8.90e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 8 MLFIILmsqGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNS-SGIKYFIVQSIAS------------ITMLTS 74
Cdd:TIGR01770 108 LLFALL---GIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTeAGLKYFILGAFSSglllfgisliygFTGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 75 ITSLMIY------DYPYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIA---------PMLILSY 139
Cdd:TIGR01770 185 FEDLLLFlsngmlNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifavflrlfLYILFGF 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 140 LEITQKLVELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISI--------- 210
Cdd:TIGR01770 265 SEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLgafgvlsll 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 211 -SFKSNNIFMINEIYLNKNFNKMNKFNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMK- 288
Cdd:TIGR01770 345 rSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRv 424
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1275874127 289 ---MFMSAGlissqeNSWHLNNMLNKPLDNLASYLNLLSTLGIILSSVLF 335
Cdd:TIGR01770 425 vkvMYFDKP------ERRIPSNPQSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-336 |
8.45e-80 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 246.27 E-value: 8.45e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 1 MNKAPMKMLFIILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSITSLMI 80
Cdd:MTH00160 1 MMMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 81 YDYPYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILSYLeITQKLVELFIISSALIGAI 160
Cdd:MTH00160 81 NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL-INNNFIIIIIILSAIIGAI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 161 MGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNLALS 240
Cdd:MTH00160 160 GGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLN 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 241 FLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMSAGLISSQENSWHLNNMLNKPLDNLaSYL 320
Cdd:MTH00160 240 LLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLIL-NFL 318
|
330
....*....|....*.
gi 1275874127 321 NLLSTLGIILSSVLFL 336
Cdd:MTH00160 319 SFISLFGLILSSLLFL 334
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-332 |
4.56e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 185.09 E-value: 4.56e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 5 PMKMLFIILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSitSLMIYDYP 84
Cdd:MTH00144 4 PSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFG--SLIMYNLS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 85 YVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILS---YLEITQKLVELFIISSALIGAIM 161
Cdd:MTH00144 82 FSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSnflDLYWLAYLLCVISVLSALVGSIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 162 GLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIyLNKNFNKMNKFNLALSF 241
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL-GSLKPSYKTGLSIISLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 242 LSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMSAGLISSQENSWHLNNMLNKPLdnlaSYLN 321
Cdd:MTH00144 241 LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSI----ISLN 316
|
330
....*....|.
gi 1275874127 322 LLSTLGIILSS 332
Cdd:MTH00144 317 LLGGLLFLLLY 327
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
8-336 |
4.39e-55 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 183.21 E-value: 4.39e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 8 MLFIILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSIT-------SLMI 80
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALiqawlsgSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 81 YDyPYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILSYL--EITQKLVELFIISSALIG 158
Cdd:MTH00041 87 NG-PLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIsnLLNSNILILCGILSVLVG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 159 AIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNLA 238
Cdd:MTH00041 166 GWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 239 LSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMSAGLISSQENSWHLNNMLN----KPLD 314
Cdd:MTH00041 246 LSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNsgniTVYG 325
|
330 340
....*....|....*....|..
gi 1275874127 315 NLASYLNLLSTLGIILSSVLFL 336
Cdd:MTH00041 326 VILSILSSISILGLLLIPLFLS 347
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-292 |
5.65e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 177.17 E-value: 5.65e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 8 MLFIILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSiTSLMIYDYPYVT 87
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMG-GSLSFSNLYLSL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 88 FITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILSYLEITQKLVELFIISSALIGAIMGLNQIS 167
Cdd:MTH00197 80 LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSVLSSLIGGIGGMNQSN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 168 LRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNLALSFLSLGGM 247
Cdd:MTH00197 160 IRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGL 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1275874127 248 PPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMS 292
Cdd:MTH00197 240 PPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYK 284
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
9-334 |
1.49e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 171.57 E-value: 1.49e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 9 LFIILMS--QGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIAS-ITMLTSITSLMIYDYPY 85
Cdd:MTH00105 6 LIIIYLTlfLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASmLLMMAIIINLMYSGQWT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 86 VTFITSLTA-----ISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILS--YLEITQKLVELFIISSALIG 158
Cdd:MTH00105 86 ITKLTNPTAstlmtIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYqiSPSINPNLLLTLAILSILIG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 159 AIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNLA 238
Cdd:MTH00105 166 GWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLIL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 239 LSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMSAGLISSQENswhlNNMLNKPLDNLAS 318
Cdd:MTH00105 246 LTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPST----NNMKMKWQFENTK 321
|
330
....*....|....*.
gi 1275874127 319 YLNLLSTLgIILSSVL 334
Cdd:MTH00105 322 PMTLLPTL-IILSTML 336
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
6-336 |
1.66e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 171.31 E-value: 1.66e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 6 MKMLFIILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSITSLMIYDYPY 85
Cdd:MTH00200 5 ILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 86 ------VTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILSYL--EITQKLVELFIISSALI 157
Cdd:MTH00200 85 gisemlGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLapALNSNILLLLGLLSVLV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 158 GAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNL 237
Cdd:MTH00200 165 GGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 238 ALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKM-FMSAGLISSQENSWHLNNMLNKPLDNL 316
Cdd:MTH00200 245 GLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLsYLTLLTLSPNQINMMSSWRTKSNSNLL 324
|
330 340
....*....|....*....|
gi 1275874127 317 ASYLNLLSTLGIILSSVLFL 336
Cdd:MTH00200 325 VGLLLLLSILGLPLTPQLLF 344
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
7-289 |
1.74e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 168.46 E-value: 1.74e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 7 KMLFIILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSITSLMI----YD 82
Cdd:MTH00112 6 KLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWntgqWD 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 83 YPYVTFITSLT--AISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPM--LILSYLEITQKLVELFIISSALIG 158
Cdd:MTH00112 86 ITQLTNPTSCTllTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLtlLLMTSNSLNPTLLLTLAILSTLIG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 159 AIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNLA 238
Cdd:MTH00112 166 GWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLM 245
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1275874127 239 LSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKM 289
Cdd:MTH00112 246 LTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRL 296
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-299 |
4.58e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 167.26 E-value: 4.58e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 1 MNKAPMKMLFIILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSITSLMI 80
Cdd:MTH00011 2 MSTFPTMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 81 YDYPYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILSYL--EITQKLVELFIISSALIG 158
Cdd:MTH00011 82 FPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFtsHNILPMMTSMAAMSALAG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 159 AIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNLA 238
Cdd:MTH00011 162 GLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLF 241
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1275874127 239 LSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMSAGLISSQ 299
Cdd:MTH00011 242 IMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPT 302
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
9-289 |
1.51e-45 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 158.43 E-value: 1.51e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 9 LFIILMSQ--GTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITML-TSITSLMI---YD 82
Cdd:MTH00135 6 LTILLFSLglGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILfASTTNAWLtgqWD 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 83 YPYVT--FITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPM-LILSYLEITQKLVELFIISSALIGA 159
Cdd:MTH00135 86 IQQMShpLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFaLILQIAPTNPTLLITLGLTSTLVGG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 160 IMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNLAL 239
Cdd:MTH00135 166 WGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPL 245
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1275874127 240 SFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKM 289
Cdd:MTH00135 246 ILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRL 295
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-335 |
4.73e-45 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 157.00 E-value: 4.73e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 1 MNKAPMKMLFIILmSQGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSIT---- 76
Cdd:MTH00070 1 MSPYALSILLSSL-ALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTinaw 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 77 ---SLMIYDYPYVTFITSLTaISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPM--LILSYLEITQKLVELFI 151
Cdd:MTH00070 80 ftgEWTIMNMQTPLPTIMLT-IALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMalLIQISHLLNSNLLIIMG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 152 ISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNK 231
Cdd:MTH00070 159 LLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 232 MNKFNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMSAGLISSQenswhlNNMLNK 311
Cdd:MTH00070 239 TLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSP------NTSNSK 312
|
330 340
....*....|....*....|....
gi 1275874127 312 PLDNLASYLNLLSTLGIILSSVLF 335
Cdd:MTH00070 313 LYWRFKNKTNNLLSLTIILSLMLL 336
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
24-279 |
5.20e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 110.48 E-value: 5.20e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 24 SNNWLGIWMGLEINLLSFIPLITYNKGS-NMNSSGIKYFIVQSIASITMLTSI-----------------TSLMIYDYPY 85
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGIslmynytgtlsfdelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 86 VTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIIL-MTWQKIAPMLIL-------SYLEITQKLVELFIISSALI 157
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIrrsllylPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 158 GAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTI----WMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMN 233
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1275874127 234 KFNL-----ALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISS 279
Cdd:pfam00361 241 TMPIlalvfLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
17-316 |
5.16e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 98.18 E-value: 5.16e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 17 GTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNS-SGIKYFIVQSIAS------------ITMLTSITSLMIYDY 83
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAeAGLKYFVLGALSSglflfgcallcgTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 84 PYVTFIT-------SLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILSYLEITQKLVELFIISSAL 156
Cdd:MTH00196 85 SGQSFSSvsvpigyLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGGLFSLF 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 157 IGAIMGLNQISLRLIMSYSSISHMGWMMAALFSN-------STIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNf 229
Cdd:MTH00196 165 VGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGsfesiqaSLVYLFIYIIMSICVFSIILALNVYKNLIIEFSGLSRR- 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 230 NKMNKFNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMfmsAGLISSQENSWHL--NN 307
Cdd:MTH00196 244 LPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI---VKILFFQANSFLLisTK 320
|
....*....
gi 1275874127 308 MLNKPLDNL 316
Cdd:MTH00196 321 ILKKENKIN 329
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
4-289 |
1.22e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 95.08 E-value: 1.22e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 4 APMKMLFIILmsqGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNS-SGIKYFIVQSIASI------------- 69
Cdd:MTH00199 99 SPILILIVAL---GSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTeAGLKYFVLGAVSSGlflfgcallyglt 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 70 --TMLTSITSLMIYDYPYVtfitsLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILSYLEITQKLV 147
Cdd:MTH00199 176 geTSIQGINSILTGDVGKI-----LITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVV 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 148 ELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAAL----FSNSTIWMIYFLTYTLMTT---LISISFKSNNIFMI 220
Cdd:MTH00199 251 LICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVaigsFESIQASLIYMIIYVIMSIcsfSIILSLKLTKGLIV 330
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874127 221 NEIYLNKNfNKMNKFNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKM 289
Cdd:MTH00199 331 EVSGLSRK-NPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-294 |
1.36e-21 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 94.80 E-value: 1.36e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 8 MLFIILmsqGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNS-SGIKYFIVQSIASITML------------TS 74
Cdd:COG1007 108 LLFATL---GMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSeAALKYFLLGALSSGFLLygisllygatgsLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 75 ITSLM------IYDYPYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLIL---------SY 139
Cdd:COG1007 185 LAGIAaalaagGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafpGL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 140 LEITQKLVELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIW----MIYFLTYTLMT--TLISISFK 213
Cdd:COG1007 265 AADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGvsaaLFYLLAYLFMNlgAFAVILLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 214 SNNIFMINEIYlnkNFNKMNK------FNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYM 287
Cdd:COG1007 345 SRKGGEAEEIE---DLAGLARrspllaLAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYL 421
|
330
....*....|.
gi 1275874127 288 K----MFMSAG 294
Cdd:COG1007 422 RvvkaMYFDEP 432
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-293 |
7.06e-18 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 84.10 E-value: 7.06e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 8 MLFIILmsqGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNS-SGIKYFIVQSIASITMLTSITslMIYDY--- 83
Cdd:PRK05777 109 VLFALL---GMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLeAAIKYFVLGALASGFLLYGMS--LLYGAtgs 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 84 -----------------PYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLIL--------- 137
Cdd:PRK05777 184 lsfagiakaladgsgnsLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLlrllvvafg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 138 SYLEITQKLVELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTI----WMIYFLTYTLMT--TLISIS 211
Cdd:PRK05777 264 GLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTlgAFGVIS 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 212 FKSNNIFMINEIYLNKNFNKMNKFnLALSF----LSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYM 287
Cdd:PRK05777 344 LLRRKGGEAESISDFAGLSKRSPL-LAAVMtifmLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYL 422
|
330
....*....|
gi 1275874127 288 K----MFMSA 293
Cdd:PRK05777 423 RviklMYFDE 432
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-335 |
8.90e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 83.84 E-value: 8.90e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 8 MLFIILmsqGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNS-SGIKYFIVQSIAS------------ITMLTS 74
Cdd:TIGR01770 108 LLFALL---GIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTeAGLKYFILGAFSSglllfgisliygFTGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 75 ITSLMIY------DYPYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIA---------PMLILSY 139
Cdd:TIGR01770 185 FEDLLLFlsngmlNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifavflrlfLYILFGF 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 140 LEITQKLVELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISI--------- 210
Cdd:TIGR01770 265 SEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLgafgvlsll 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 211 -SFKSNNIFMINEIYLNKNFNKMNKFNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMK- 288
Cdd:TIGR01770 345 rSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRv 424
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1275874127 289 ---MFMSAGlissqeNSWHLNNMLNKPLDNLASYLNLLSTLGIILSSVLF 335
Cdd:TIGR01770 425 vkvMYFDKP------ERRIPSNPQSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
10-289 |
5.84e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 78.75 E-value: 5.84e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 10 FIILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLI--TYNKGSNMNS-------SGIKYFIVQ---------------- 64
Cdd:MTH00198 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAgeGSQPGSHFPSpgntppeSGLKYWILGamssgfylfgcalyfg 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 65 ---------SIASITMLTSITSLMIYDYPYVtFITsltaISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPML 135
Cdd:MTH00198 273 ftgnegmlgTILSATLETTNIELRQGSLGYL-FIT----VAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYI 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 136 ILSYLEITQKLVELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAAL-------FSNSTIWMIYFLTYTLMT-TL 207
Cdd:MTH00198 348 LLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagtyesLQASWTYAVTYLVSALASfTV 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 208 ISISFKSNNIFMINEIYLNK--NFNKMNK---------------FNLALSFLSLGGMPPLLGFLPKW-ILIEQLMI---- 265
Cdd:MTH00198 428 ICTLEEFGTRTPTSRQRDGSfgNYNLVRRlvdltilsrgqpyiaFSLAIVFLSLAGIPPLLGFLGKWfILVGSIKIafss 507
|
330 340
....*....|....*....|....*.
gi 1275874127 266 --NSQYLINFTLIISSVITLYFYMKM 289
Cdd:MTH00198 508 slSIYYLVALFAIICTCISAFYYIRI 533
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
8-294 |
7.62e-16 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 77.88 E-value: 7.62e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 8 MLFIILMSqGTLISVTSNNWLGIWMGLEINLLSFIPLITYNKGSNMNSSGIKYFIVQSIASITMLTSItsLMIY------ 81
Cdd:COG0651 111 PLFLLLLA-GMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGV--GLLYgatgtl 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 82 ------------DYPYVTFITSLTAISILMKMGAAPLHFWFPEIMENLEWNNCIIL---MTwqKIAPMLIL--------- 137
Cdd:COG0651 188 nmadlaarlaelDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLsglLT--KVGVYAILrvltllfga 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 138 SYLEITQKLVELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLisisFKSNnI 217
Cdd:COG0651 266 DPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHAL----AKAL-L 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 218 FM----INEIYLNKNFNKMN---------KFNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLY 284
Cdd:COG0651 341 FLaagaIERATGTRDLDKLGglgkrmpltAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLA 420
|
330
....*....|
gi 1275874127 285 FYMKMFMSAG 294
Cdd:COG0651 421 YFVRIFGRAQ 430
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
154-292 |
6.33e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 59.98 E-value: 6.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 154 SALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLI-SISFKSNNIFM-------INEIYL 225
Cdd:PRK12667 305 SAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAkSLLFLASGVFIhaagtrdIDELAG 384
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1275874127 226 NKNFNKMNKFNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMS 292
Cdd:PRK12667 385 LGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
72-313 |
2.02e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 58.48 E-value: 2.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 72 LTSITSLMIYDYPYVTFITSLTAISILM----KMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPM--------LILSY 139
Cdd:CHL00049 195 LQEIVNGLINTQMYNSPGISIALIFITVgigfKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASalatrifdIPFYF 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 140 LEITQKLV-ELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMM----AALFSNSTIWMI-YFLTYTLM-------TT 206
Cdd:CHL00049 275 SSNEWHLLlEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIigiiVGDSNDGYASMItYMLFYIFMnlgtfacIV 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 207 LISISFKSNNIFMINEIYLNKNFNKmnkFNLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFY 286
Cdd:CHL00049 355 LFGLRTGTDNIRDYAGLYTKDPFLA---LSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYY 431
|
250 260
....*....|....*....|....*..
gi 1275874127 287 MKMFMSAGLISSQENSWHLNNMLNKPL 313
Cdd:CHL00049 432 LKIIKLLMTGRNQEITPYVRNYRRSPL 458
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
70-335 |
8.54e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 56.60 E-value: 8.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 70 TMLTSITSLMIYDYPYVTFITSLTAIS-ILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIA------PMLILSYLEI 142
Cdd:PRK02504 192 TQLSAIALALITSPSLGLALALVFVIAgIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalaiRLLVTAFPSF 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 143 TQKLVELFI---ISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNS----TIWMIYFLTYTLMT-------TLI 208
Cdd:PRK02504 272 DEQWKLLFTalaILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagyASMVFYLLAYLFMNlgafacvILF 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 209 SISFKSNNIFMINEIYLNKNFNKMNkfnLALSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYM- 287
Cdd:PRK02504 352 SLRTGTDQISDYAGLYQKDPLLTLG---LSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIr 428
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1275874127 288 --KMF-------MSAGLISSQENSWHLNNMlnKPLdNLASYLNLLST-LGIILSSVLF 335
Cdd:PRK02504 429 viKMMvvkepqeMSDVVKNYPEINWNLPGM--RPL-RVGLVLCVIATaLAGILSNPLF 483
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-293 |
4.29e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 48.17 E-value: 4.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 11 IILMSQGTLISVTSNNWLGIWMGLEINLLSFIPLITY-NKGSNMNSSGIKYFIVQSIASITMLTSITSL--------MIY 81
Cdd:PRK08376 127 ILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFrNDTWEAIEAGIKYMFVGSLASSMVLLGIALLygqygtlnMAY 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 82 DYPYVTFITSLTAI--------SILMKMGAAPLHFWFPEIMEnlewnnciilMTWQKIAPMLI----------------L 137
Cdd:PRK08376 207 LAVKMSENPTVVAKialalfiaGLAMKSGAVPVHMWLPDAYP----------AAPSSISAMLLvikqaglyalarvlfsI 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 138 SYLEITQKLVELFII----SSALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISFK 213
Cdd:PRK08376 277 YGPAINLATVGWVIIilgcLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGLAALGDPAMASYGEIALAGGIYH 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 214 S-NNIFMINEIYL----------NKNFNKMN---------KFNLALSFLSLGGMPPLLGFLPKWILIEqlminSQYLINF 273
Cdd:PRK08376 357 IvNHALYKALLFLtagaviyetgTRNLNELGglartmpktTIAFLIGAAAIVGLPPFNGFASKWLIYE-----SSALFNP 431
|
330 340
....*....|....*....|....
gi 1275874127 274 TL----IISSVITLYFYMKMFMSA 293
Cdd:PRK08376 432 ILgviaMIGSVLTLASFVKVFHTA 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
154-287 |
8.30e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 47.18 E-value: 8.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 154 SALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTIWMIYFLTYTLMTTLISISfksnnIFM----INEIYLNKNF 229
Cdd:PRK08375 281 SMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGA-----LFLaagaIEVTYGTRRL 355
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1275874127 230 NKMNKFN-----LALSF----LSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLyFYM 287
Cdd:PRK08375 356 SELSGLGrrmplTAAAFavasLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLAL-LYF 421
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
149-264 |
3.54e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 42.34 E-value: 3.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 149 LFIIS---SALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTiwmiYFLTYTLMTTLISISFKSnNIFMINEIY- 224
Cdd:PRK12650 274 LLIIVgmiTALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTP----FALTAAVVHTLAHALFKS-SLFMLIGVVd 348
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1275874127 225 ----------LNKNFNKM--NKFNLALSFLSLGGMPPLLGFLPKWILIEQLM 264
Cdd:PRK12650 349 hqagtrdirrLGSLWRRMpfTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFL 400
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
239-293 |
4.56e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 41.86 E-value: 4.56e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 1275874127 239 LSFLSLGGMPPLLGFLPKWILIEQLMINSQYLINFTLIISSVITLYFYMKMFMSA 293
Cdd:PRK07691 378 IAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKG 432
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
92-287 |
4.66e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 42.06 E-value: 4.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 92 LTAISILMKMGAA------PLHFWFPEIMEnlewnnciilmtwqkiAPM-----------------------LILSYLEI 142
Cdd:COG1009 210 LTLILLLLLLGAFgksaqfPLHFWLPDAME----------------GPTpvsallhaatmvkagvyllarlsPLFALSPV 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 143 TQKLVELFIISSALIGAIMGLNQISLRLIMSYSSISHMGWMMAAL-FSNSTIWMIYFLTYTLmttlisisFKSnNIFM-- 219
Cdd:COG1009 274 WLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALgVGAYVAALFHLLTHAF--------FKA-LLFLga 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 220 --INEIYLNKNFNKMNkfNL-----------ALSFLSLGGMPPLLGFLPKWILIEQLMI--NSQYLINFTLIISSVITLy 284
Cdd:COG1009 345 gsVIHATGTRDIRKMG--GLrkkmpitaitfLIGALSLAGIPPFAGFFSKEAILEAALEagGLGPLLLAVALLGAFLTA- 421
|
...
gi 1275874127 285 FYM 287
Cdd:COG1009 422 FYS 424
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
95-288 |
6.49e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 40.62 E-value: 6.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 95 ISILMKMGAAPLHFWFPEIMENLEWNNCIILMTWQKIAPMLILsyLEITQKLVELFIISSALIGAIMGLNQISLRLIMSY 174
Cdd:MTH00091 65 LILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVL--LQFFSKNFFFLLLFGLLICFFQMFLLKSYKNLLIL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874127 175 SSISHMGWM-MAALFSNSTIWMIYFLTYTLMTTLISISFKSNNIFMINEIYLNKNFNKMNKFNLALSFLSLGGMPPLLGF 253
Cdd:MTH00091 143 SSTESFNWLiLSFFFSFFNVFFLFFYYFLLMLFLIPKFNNVNKLNFVSWETLLVFMNLPFSVTFFVKIFSLSEILKVLGF 222
|
170 180 190
....*....|....*....|....*....|....*
gi 1275874127 254 LpkWILIEQLMINSQYLINFTLIISSVITLYFYMK 288
Cdd:MTH00091 223 F--LLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFK 255
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
154-193 |
7.30e-03 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 38.14 E-value: 7.30e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1275874127 154 SALIGAIMGLNQISLRLIMSYSSISHMGWMMAALFSNSTI 193
Cdd:COG1008 285 GIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPL 324
|
|
| |
