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Conserved domains on  [gi|1476682077|gb|AXZ96210|]
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DP96R [African swine fever virus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UK super family cl03631
Virulence determinant; The UK protein is an African swine fever virus (ASFV) protein that is ...
 1-96 7.68e-65

Virulence determinant; The UK protein is an African swine fever virus (ASFV) protein that is highly conserved amongst strains, and is an important viral virulence determinant for domestic pigs.


The actual alignment was detected with superfamily member pfam02512:

Pssm-ID: 280645  Cd Length: 96  Bit Score: 190.43  E-value: 7.68e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476682077  1 MSTHDCSLKEKPVDMNDISEKSVVVDNAPEKPAGANHIPEKSAREMTSSEWIAEYWKGIKRGNDVPCCCPRKMTSADKKF 80
Cdd:pfam02512  1 MSTHDCFSKEKPVDMNDISEKSSVVDNAPEKPAGANHIPEKSAREMTSSEWIAEYWKGIKRGNDVPCCCPRKMTSADKKF 80

                         90
                 ....*....|....*.
gi 1476682077 81 SVFGKGSLMRSIQKNN 96
Cdd:pfam02512 81 SVFGKGSLIRSIQKNN 96
 
Name Accession Description Interval E-value
UK pfam02512
Virulence determinant; The UK protein is an African swine fever virus (ASFV) protein that is ...
 1-96 7.68e-65

Virulence determinant; The UK protein is an African swine fever virus (ASFV) protein that is highly conserved amongst strains, and is an important viral virulence determinant for domestic pigs.


Pssm-ID: 280645  Cd Length: 96  Bit Score: 190.43  E-value: 7.68e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476682077  1 MSTHDCSLKEKPVDMNDISEKSVVVDNAPEKPAGANHIPEKSAREMTSSEWIAEYWKGIKRGNDVPCCCPRKMTSADKKF 80
Cdd:pfam02512  1 MSTHDCFSKEKPVDMNDISEKSSVVDNAPEKPAGANHIPEKSAREMTSSEWIAEYWKGIKRGNDVPCCCPRKMTSADKKF 80

                         90
                 ....*....|....*.
gi 1476682077 81 SVFGKGSLMRSIQKNN 96
Cdd:pfam02512 81 SVFGKGSLIRSIQKNN 96
 
Name Accession Description Interval E-value
UK pfam02512
Virulence determinant; The UK protein is an African swine fever virus (ASFV) protein that is ...
 1-96 7.68e-65

Virulence determinant; The UK protein is an African swine fever virus (ASFV) protein that is highly conserved amongst strains, and is an important viral virulence determinant for domestic pigs.


Pssm-ID: 280645  Cd Length: 96  Bit Score: 190.43  E-value: 7.68e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476682077  1 MSTHDCSLKEKPVDMNDISEKSVVVDNAPEKPAGANHIPEKSAREMTSSEWIAEYWKGIKRGNDVPCCCPRKMTSADKKF 80
Cdd:pfam02512  1 MSTHDCFSKEKPVDMNDISEKSSVVDNAPEKPAGANHIPEKSAREMTSSEWIAEYWKGIKRGNDVPCCCPRKMTSADKKF 80

                         90
                 ....*....|....*.
gi 1476682077 81 SVFGKGSLMRSIQKNN 96
Cdd:pfam02512 81 SVFGKGSLIRSIQKNN 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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