|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-571 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 705.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 1 MCSLSFFSLSFSSFFIFTLGIYYLMTDYSVFVEWEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEK 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 81 NMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 161 SWNYIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNI 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 241 GWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDS 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 321 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 401 DNNFYSSFSFSDNSYYISFGMIGLLIFAVFGGSLLSWLIFPIPQSIYLPYYLKFLTIVVVLLGSYFGYLVSSFDSSRYSF 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 481 SLGILSFVSFAGSMWFMPFISTKFISYFPLKFGYYSSKNFDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFI 560
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
570
....*....|.
gi 1494235700 561 FWMFILIILFL 571
Cdd:MTH00165 563 LWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
19-570 |
3.51e-177 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 512.47 E-value: 3.51e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 19 LGIYYLMTDYSVFVEWEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAF 98
Cdd:MTH00151 21 LLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 99 LIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFISNSFemk 178
Cdd:MTH00151 101 LIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDFKLSGW--- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 179 mITMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIG-WFLLLIGCLTMFMAGL 257
Cdd:MTH00151 178 -LGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFsSFLLFISLLTLLMAGI 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 258 GANFEFDLKKIIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTS 337
Cdd:MTH00151 257 SACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTS 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 338 VCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYI 417
Cdd:MTH00151 337 GCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYV 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 418 SFGMIGLLIFAVFGGSLLSWLIFPIPQSIYLPYYLKFLTIVVVLLGSYFGYLvsSFDSSRYSFSLGILSFvsFAGSMWFM 497
Cdd:MTH00151 417 SLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFG--FWDSGFSSSKMVKLSF--FFSSMWFL 492
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1494235700 498 PFISTKFISYFPLKFGYYSSKNFDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFIFWMFILIILF 570
Cdd:MTH00151 493 SPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
21-570 |
2.26e-173 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 502.64 E-value: 2.26e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 21 IYYLMTDYSVFVEWEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLI 100
Cdd:MTH00209 21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 101 ISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGSWNyIYYYDFISNSfeMKMI 180
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL--GSVI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 181 TMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DCYNIGWFLLLIGCLTMFMAGLGA 259
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLfSSPFFSMSLLLLGSLTTLMASMSA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 260 NFEFDLKKIIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVC 339
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSIC 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 340 FNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYISF 419
Cdd:MTH00209 338 LNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLK 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 420 GMIGLLIFAVFGGSLLSWLIFPIPQSIYLPYYLKFLTIVVVLLGSYFGYLVSSFDSSRYSFslgiLSFVSFAGSMWFMPF 499
Cdd:MTH00209 418 PMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKG----YKVNYFLSQMWFLPD 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1494235700 500 ISTKFISYFPLKFGYYSSKNFDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFIFWMFILIILF 570
Cdd:MTH00209 494 LSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
19-570 |
2.30e-168 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 490.05 E-value: 2.30e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 19 LGIYYLMTDYSVFVEWEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAF 98
Cdd:MTH00207 24 LSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNM 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 99 LIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFISNSFemk 178
Cdd:MTH00207 104 LIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQTDMNNY--- 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 179 mITMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDcyNIGWF---LLLIGCLTMFMA 255
Cdd:MTH00207 181 -IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLS--STYWFnpaLLLTASLTMLMA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 256 GLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPL 335
Cdd:MTH00207 258 GLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPL 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 336 TSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSY 415
Cdd:MTH00207 338 TTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDK 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 416 YISFGMIGLLIFAVFGGSLLSWLIFPIPQSIYLPYYLKFLTIVVVLLGSYFGYLVSSFDSSRYSFSLGILSFVSFAGSMW 495
Cdd:MTH00207 418 SLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFASCLMW 497
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1494235700 496 FMPFISTKFISYFPLKFGYYSSKNFDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFIFWMFILIILF 570
Cdd:MTH00207 498 FLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
29-572 |
1.56e-121 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 370.82 E-value: 1.56e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 29 SVFVEWEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISI 108
Cdd:MTH00211 56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 109 LLGWDGLGLVSYCLVIYYQNVKSYGAGMLTAL-SNRIGDVAILISIAWML-NFGSWNYIYYYdfiSNSFEMKMITMLIVL 186
Cdd:MTH00211 136 FIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLF---ILNLDLTLFLLGLLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 187 AGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LDCYNIGWFLLLIGCLTMFMAGLGANFEFDL 265
Cdd:MTH00211 213 AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLfQNNQLILGAVLLLGALTMLFGALCALTQNDI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 266 KKIIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:MTH00211 293 KKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSL 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 346 SLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYISFGMIGLL 425
Cdd:MTH00211 373 ALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 426 IFAVFGGSLLSWLIFPI-PQSIYLPYYLKFLTIVVVLLGSYFGYLVSSFDSSRYSfslgiLSFVSFAGSMWFMPFISTKF 504
Cdd:MTH00211 453 LGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLK-----TSTLSFSNMLGYYPPIIHRL 527
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1494235700 505 ISYFPLKFG-YYSSKNFDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFIFWMFILIILFLL 572
Cdd:MTH00211 528 LPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLL 596
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
46-572 |
1.05e-98 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 312.10 E-value: 1.05e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 46 MTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:MTH00004 78 ISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 126 YQNVKSYGAGMLTA-LSNRIGDVAILISIAWM-LNFGSWNyiyyydfISNSFEMKMITML----IVLAGMTKSAQIPFSS 199
Cdd:MTH00004 158 WSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWE-------IQQLFSPTQTPTLpllgLILAATGKSAQFGLHP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 200 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIGWFL-LLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:MTH00004 231 WLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLG 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 279 LMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYS 358
Cdd:MTH00004 311 LMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYS 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 359 KDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYISFGMIGLLIFAVFGGSLLSWL 438
Cdd:MTH00004 391 KDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISST 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 439 IFPI-PQSIYLPYYLKFLTIVVVLLGSYFGYLVSSFDSSRYSFSLGILSfvSFAGSMWFMPFISTKFISYFPLKFGY-YS 516
Cdd:MTH00004 471 ILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLH--NFSNQLAFFNPLTHRLLPMTLLKSSQkIA 548
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 1494235700 517 SKNFDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFIfwMFILIILFLL 572
Cdd:MTH00004 549 THLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFA--LTILLLLLLT 602
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
37-572 |
1.42e-96 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 307.28 E-value: 1.42e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 37 FSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLG 116
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVG 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 117 LVSYCLVIYYQNVKSYGAGMLTA-LSNRIGDVAILISIAW-MLNFGSWNYIYYYDFISNSFEMKMITML-IVLAGMTKSA 193
Cdd:MTH00208 172 FLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLNEILSLNNSNSFLINILLFgILLAAAGKSA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDcyNIGWFL---LLIGCLTMFMAGLGANFEFDLKKIIA 270
Cdd:MTH00208 252 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS--NSPWFLslcLILGSLTALFAASTAISQHDIKKIIA 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 271 LSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGM 350
Cdd:MTH00208 330 YSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGT 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 351 PFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYISFGMIGLLIFAVF 430
Cdd:MTH00208 410 PFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTII 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 431 GGSLLSWLIFPIPqSIYLPYYLKFLTIVVVLLGSYFGYLVSSFDSSRYSFSlgilSFVSFAGSMWFMPFISTKFISYFPL 510
Cdd:MTH00208 490 SGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINS----NFFSFLSNQWFFVNISHSIIISFSF 564
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1494235700 511 KFGYY-SSKNFDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFIFWMFILIILFLL 572
Cdd:MTH00208 565 FTSLFgSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLI 627
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
29-570 |
2.83e-94 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 300.29 E-value: 2.83e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 29 SVFVEWEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISI 108
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 109 LLGWDGLGLVSYCLV-IYYQNVKSYGAGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYydFISNSFEMKMITMLIvL 186
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQI--FLLNDNSTLPLLGLI-L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 187 AGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DCYNIGWFLLLIGCLTMFMAGLGANFEFDL 265
Cdd:MTH00066 216 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLeNNQTALTICLCLGALTTLFTAACALTQNDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 266 KKIIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:MTH00066 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 346 SLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYISFGMIGLL 425
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 426 IFAVFGGSLLSWLIFPI-PQSIYLPYYLKFLTIVVVLLGSYFGYLVSSFDSSrysfSLGILSFVSFAGSMWFMPFISTKF 504
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSK----TTPKTKMHSFSNLLAFFPTIIHRL 531
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1494235700 505 ISYFPLKFGYYSSKN-FDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFIFWMFILIILF 570
Cdd:MTH00066 532 SPKTNLNSGQNIATHlTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
34-470 |
1.41e-93 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 298.60 E-value: 1.41e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 34 WEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWD 113
Cdd:COG1009 62 YTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 114 GLGLVSYCLVIYYQNVKSYGAGMLTA-LSNRIGDVAILISIAWMLN-FGSWNYIYYYDFISNSFEMKMIT---MLIVLAG 188
Cdd:COG1009 142 LVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFSELLAAAPTILSSPLLTlilLLLLLGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNI-GWFLLLIGCLTMFMAGLGANFEFDLKK 267
Cdd:COG1009 222 FGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVwLTVVAIIGAITALFAALIALAQTDIKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 268 IIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSL 347
Cdd:COG1009 302 VLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 348 CGMPFLAGFYSKDLILE-MVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYISFGMIGLLI 426
Cdd:COG1009 381 AGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAV 460
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1494235700 427 FAVFGGSLLSWL---------IFPIPQSIYLPYYLKFLTIVVVLLGSYFGYLV 470
Cdd:COG1009 461 LSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
34-463 |
1.86e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 285.21 E-value: 1.86e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 34 WEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWD 113
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 114 GLGLVSYCLVIYYqnvksYG------AGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYydFISNSFEMKMITMLIVL 186
Cdd:MTH00108 146 GVGIMSFLLIGWW-----YGrtdantAALQAILYNRIGDIGFILAMAWfLLNLNSWDLQQI--FMLNPNNSNLPLMGLLL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 187 AGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIGWFLLLigCL----TMFMAgLGANFE 262
Cdd:MTH00108 219 AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTL--CLgaitTLFTA-ICALTQ 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 263 FDLKKIIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNV 342
Cdd:MTH00108 296 NDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALII 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 343 SSLSLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYISFGMI 422
Cdd:MTH00108 376 GSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIK 455
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1494235700 423 GLLIFAVFGGSLLSWLIFP--IPQsIYLPYYLKFLTIVVVLLG 463
Cdd:MTH00108 456 RLLLGSIFAGFLISNNIPPttIPQ-MTMPLYLKLTALAVTILG 497
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
34-470 |
2.22e-85 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 277.24 E-value: 2.22e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 34 WEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWD 113
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 114 GLGLVSYCLV-IYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFISNSFEMKM--ITMLIVLAGM 189
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFQEVFALAPGAFFSALtlICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYN-IGWFLLLIGCLTMFMAGLGANFEFDLKKI 268
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPtALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 269 IALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 349 GMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYISFGMIGLLIFA 428
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1494235700 429 VFGGSLLSWLIFPIPQSIY-----------LPYYLKFLTIVVVLLGSYFGYLV 470
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAYLL 517
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
51-398 |
3.44e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 269.01 E-value: 3.44e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 51 DWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYqnvk 130
Cdd:MTH00137 87 DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWW---- 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 131 sYG------AGMLTALSNRIGDVAILISIAWML-NFGSWNyIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPA 203
Cdd:MTH00137 163 -YGradantAALQAVIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPS 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNigwfLLLIGCL------TMFMA--GLGANfefDLKKIIALSTLS 275
Cdd:MTH00137 241 AMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQ----TALTTCLclgaltTLFTAtcALTQN---DIKKIVAFSTSS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 276 QLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:MTH00137 314 QLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAG 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1494235700 356 FYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRL-FYYSM 398
Cdd:MTH00137 394 FFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-469 |
7.19e-81 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 265.87 E-value: 7.19e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 46 MTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 126 YQNVKSYGAGMLTA-LSNRIGDVAILISIAWML-NFGSWNYIYYYDFISNSFEMKM-----ITMLIVLAGMTKSAQIPFS 198
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYDEVFAAAPQFFGLGWsaltlICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLD-CYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFElSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 278 GLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFY 357
Cdd:PRK06590 318 GYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFF 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 358 SKDLILEmVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDN-NFYSSFSFSDNSYYISfgMIGLLIFAVFGG---- 432
Cdd:PRK06590 398 SKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEkEKIHHPHESPAVMTLP--LIVLAVLSVFAGaliv 474
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1494235700 433 -SLLSWLIFP-----IPQSIYLPYYLKFLTIVVVLLGSYFGYL 469
Cdd:PRK06590 475 pPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAWL 517
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
34-569 |
8.71e-76 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 251.92 E-value: 8.71e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 34 WEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWD 113
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 114 GLGLVSYCLV-IYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFIS--NSFEMKMITMLIVLAGM 189
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFSSVFNMVVsaPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIGWFLL-LIGCLTMFMAGLGANFEFDLKKI 268
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 269 IALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 349 GMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYS-MSGDNNFYSSFSF-SDNSYYISFGMIGLLI 426
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTfLSNTNLKKAVFFHlHEGDWNLLLPLGILAL 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 427 FAVFGGSLLSWLIFPIPQSIY--LPYYLKFLTIVVVLLGSYFGYLVSSFDSSRYSFSLGILSFVS--FAGSMWFMPFIST 502
Cdd:MTH00020 462 GSIFVGYLAKEMIWSFQITLPpiVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIGRNSytFLGSAWQFNYILN 541
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1494235700 503 KFISYFPLKFGYY-SSKNFDYGWGELLGGQGLYKLFIYFINYIQGWY-DLNFKIYLLTFIFWMFILIIL 569
Cdd:MTH00020 542 YFLIKKIWKGGHLiSYRTIDKGVLELVGPKGISNFLIILTQGLSSLQsGLVFNYALVILIGVAIFIWGL 610
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
48-538 |
5.78e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 244.53 E-value: 5.78e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 48 LILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLV-IYY 126
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 127 QNVKSYGAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFIS---NSFEMKMITMLIVLAGMTKSAQIPFSSWLP 202
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVtniNKESLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 203 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIGWFLL-LIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM 281
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 282 SILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDL 361
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 362 ILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSS--FSFSDNSYYISFGMIGLLIFAVFGGSL----- 434
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEvfIGVHESSWNITFPLLLLAFGSIFVGYLgkevv 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 435 LSWLIFPIpqsiyLPYYLKFLTIVVVLLGSYFGYLVSS------FDSSRYSFSLGILSFVSFAGSMWFMPFISTKFISYF 508
Cdd:MTH00210 476 LSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVIYNsmvfliKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKN 550
|
490 500 510
....*....|....*....|....*....|.
gi 1494235700 509 PLKFGYY-SSKNFDYGWGELLGGQGLYKLFI 538
Cdd:MTH00210 551 IWKFGHLiTYRIIDRGLLEIIGPRGISKVLI 581
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
31-568 |
1.49e-64 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 219.79 E-value: 1.49e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 31 FVEWEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILL 110
Cdd:MTH00095 24 FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 111 GWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILIsiawmlnFGSWNYIYYYDFISNSFEMKMITMLIVLAGMT 190
Cdd:MTH00095 104 SWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFL-------FFSGFIFSSYYFFSFSFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIA 270
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 271 LSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGM 350
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 351 PFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFYysmsgdnNFYSSFSFSDNSYYISFGMIGLLIFAVF 430
Cdd:MTH00095 337 MFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWK-------SFFLSFSKVVNVYSSSVLMNFLSLMLVF 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 431 GgsllswlifpipqSIYLPYYLKFLTIVVVLLGSYFGYLVSsfdssrySFSLGILSFVSFAGSMWFMPFISTKFISYFPL 510
Cdd:MTH00095 410 F-------------SVFFLWWLNFNLLNLPSLFLYLDFYVP-------LFYLFMIMLFSFFFFKLLFKELKYKFFVDYFA 469
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1494235700 511 KFGYYSSKNFDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFIFWMFILII 568
Cdd:MTH00095 470 KNVIYKLKNLKFFDLFLNKFGYKGFNFFSSFSFFFFSYMKSFKYNSLLILLFLIFLFL 527
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
46-401 |
3.32e-64 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 222.59 E-value: 3.32e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 46 MTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 126 YQNVKSYGAGMLTA-LSNRIGDVAILISIA---WMLnfGSWNYIYYYDFISNSFEMKMIT--------MLIVLAGMTKSA 193
Cdd:PRK07376 165 WYDRKGAADAAQKAfVVNRVGDFGLLLGILglfWAT--GSFDFDGIADRLSELVSSGAVSgwlalllcILVFLGPMAKSA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCY-NIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALS 272
Cdd:PRK07376 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFpAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 273 TLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLND--------SQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK07376 323 TISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGC 402
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1494235700 345 LSLCGMPFLAGFYSKDLILEMVCLSwvNFLIFFLYFFSTGLTASYSFRLFYYSMSGD 401
Cdd:PRK07376 403 LAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-382 |
5.02e-55 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 187.91 E-value: 5.02e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 102 SPNLISILLGWDGLGLVSYCLVIYY-QNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYDFISNSFE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 177 MKMITMLIVLAGMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDCYNIGW--FLLLIGCLTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPG---LAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIV 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1494235700 331 NFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFS 382
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
31-570 |
7.81e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 196.72 E-value: 7.81e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 31 FVEWEIFslngsMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILL 110
Cdd:MTH00032 64 WIESEIF-----ITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFI 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 111 GWDGLGLVSYCLVIYYQN-VKSYGAGMLTALSNRIGDVAILISIAWM------LNFGSWN------------YIYYYDFI 171
Cdd:MTH00032 139 GWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNggsvgsgimdrgYYGGGAYE 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 172 SNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIGWFLLLI-GCL 250
Cdd:MTH00032 219 SPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGAL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 251 TMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM-GYPGLAFFHLLSHALFKALLFMCAGSMIHNLN-DSQDIRFMGS 328
Cdd:MTH00032 299 TAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGG 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 329 IVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCL------------------------------------SWVN 372
Cdd:MTH00032 379 LIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddrgsiggpegypSRGS 458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 373 FLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYISFGMIGLLIFAVFGGSLLSWLIFPI---------- 442
Cdd:MTH00032 459 AFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdiehpiv 538
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 443 -PQSIYLPYYLKFLTIVVVLL---GSYFGYLVSSFDSSRYSFslgILSFVSFAGSMWFMPFISTKFISYFPLKFGYYSS- 517
Cdd:MTH00032 539 pPLIKVMPTLMGLFGMGLCLWaqkGTREGELYWGFDPIGPSF---LLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIy 615
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 1494235700 518 KNFDYGWGELLGGQGLYKLFIYFINYIQGWYDLNFKIYLLTFIFWMFILIILF 570
Cdd:MTH00032 616 KTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLLSFTIIFLALW 668
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-396 |
1.31e-50 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 179.96 E-value: 1.31e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 127 QNVKSYGAGMLTALSNRIGDVAILISIAWM-LNFGSWNYIYYYDFIS--NSFEMKMITMLIVLAGMTKSAQIPFSSWLPA 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 204 AMA-APTPVSALVhSSTLVTAGVYLLIRFS----PMLDCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLtllfGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 279 LMMSILSMGYPGL---AFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1494235700 356 FYSKDLILEMVcLSWVNFLIFFLYFFSTGLTASYSFRLFYY 396
Cdd:COG0651 389 FVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
32-364 |
1.40e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 187.56 E-value: 1.40e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 32 VEW-EIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILL 110
Cdd:PRK12650 58 VTWiPDLLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFV 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 111 GWDGLGLVSYCLVIYYQNVKSYGAgMLTALSNRIGDVAILISIAWMLN-FGSWNY--IYYYDFIS-NSFEMKMITMLIVL 186
Cdd:PRK12650 138 AWELVSLASFFLIARSGSGGEAGS-IRTLILTFFGGLTLLAAVAIAATqTGTTSLsgILHSDVWAeKPGLTTVVAVLIAV 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 187 AGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDcYNIGWFLLLIGC--LTMFMAGLGANFEFD 264
Cdd:PRK12650 217 AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH-DVAVWNWLLIIVgmITALMGAVFAVQKTD 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 265 LKKIIALSTLSQLGLMMSILSMGYP---GLAFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFN 341
Cdd:PRK12650 296 LKKLTAYSTVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVT 374
|
330 340
....*....|....*....|...
gi 1494235700 342 VSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12650 375 IAALSMAAVPPLFGFVSKEGMLT 397
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-392 |
5.62e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 179.62 E-value: 5.62e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 127 QNVKS--YGAGM-LT-------ALsnrIGDVAILISIAwmlnfGSwnyiYYYDFISNSFEM-------KMITMLIVLAGM 189
Cdd:PRK12648 151 HHRADarRGARMaLTvtgagglAL---LAGVLLLGHIV-----GS----YDLDVVLAAGDLirahplyPPALVLILLGAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIgWFLL--LIGCLTMFMAGLGANFEFDLKK 267
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEE-WFWIvgGAGLITLLLGAYFALFQHDLKG 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 268 IIALSTLSQLGLMMSILSMGYPG---LAFFHLLSHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK12648 298 LLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAA 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1494235700 345 LSLCGMPFLAGFYSKDL----ILEMVCLSWVNFLIFFLYFFSTGLTASYSFR 392
Cdd:PRK12648 377 AAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
47-366 |
5.35e-46 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 173.11 E-value: 5.35e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 127 -QNVKSYGAGMLTALSNRIGDVAILISIAWML----NFGSWNYIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWL 201
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNiGWFLL--LIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTE-AWFWIvgLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 280 MMSILSMGYPGL----------------AFFHLLSHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLTSVCFNVS 343
Cdd:TIGR00940 309 IMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIA 387
|
330 340
....*....|....*....|...
gi 1494235700 344 SLSLCGMPFLAGFYSKDLILEMV 366
Cdd:TIGR00940 388 SAAMAGVPPFNGFLSKEMFFAEA 410
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-419 |
8.10e-46 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 172.38 E-value: 8.10e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 67 LVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTA-LSNRIG 145
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAfVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 146 DVAILISIA---WMLN-------FGSWNYIYYYDFIsNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALV 215
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEV-NLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 216 HSSTLVTAGVYLLIRFSPMLDCY-NIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGLAFF 294
Cdd:CHL00025 265 HAATMVAAGIFLVARLLPLFIVIpYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 295 HLLSHALFKALLFMCAGSMIHNL--------NDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMv 366
Cdd:CHL00025 345 HLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILND- 423
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1494235700 367 clSWVNFLIF-FLYFFSTGLTASYSFRLFYYSMSGD---NNFYSSFSFSDNSYYISF 419
Cdd:CHL00025 424 --SWLYSPIFaIIAWSTAGLTAFYMFRIYLLTFEGHlrvHFQNYSGKKNSSFYSISL 478
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
50-364 |
1.72e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 171.26 E-value: 1.72e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 50 LDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY-YQN 128
Cdd:PRK12647 62 LDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHER 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 129 VKS----------YGAGMLTALSNRI--GDVAILISIAWMLNFGswnyiyyyDFISNSFEMKMITMLIVLAGMTKSAQIP 196
Cdd:PRK12647 142 EAArraalqallvTGGGGLALLAGLIllGNVTGTYSLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSAQFP 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 197 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLS 275
Cdd:PRK12647 214 FHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 276 QLGLMMSILSMGYPGL---AFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPF 352
Cdd:PRK12647 294 ALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
330
....*....|..
gi 1494235700 353 LAGFYSKDLILE 364
Cdd:PRK12647 373 LFGFLAKELIYE 384
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
29-472 |
6.12e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 166.59 E-value: 6.12e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 29 SVFVEWEIFSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISI 108
Cdd:MTH00063 22 SSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLST 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 109 LLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGSWNYIyyydfisnsfemkmITMLIVLAG 188
Cdd:MTH00063 102 LIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFL--------------CCLFFFLIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKI 268
Cdd:MTH00063 168 FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 269 IALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIR-----FMGSIVNFMPLTSVCfnvs 343
Cdd:MTH00063 248 VALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYGSWNLFYLFLLV---- 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 344 sLSLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTGLTASYSFRLFyysmsgdNNFYSSFSFSDNSYYISFGMIG 423
Cdd:MTH00063 324 -LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC-------LILFGVKSSLSSGVRFLFFNSG 395
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1494235700 424 LLIFavFGGSLLSWLIFPIPQSIYLPYYLKFLTIVVVLLGSYFGYLVSS 472
Cdd:MTH00063 396 LMVF--LWLFINYYVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLFYD 442
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
389-570 |
1.60e-42 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 150.39 E-value: 1.60e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 389 YSFRLFYYSMSGDNNFYSSFSFSDNSYYISFGMIGLLIFAVFGGSLLSWLIFPIPQSIYLPYYLKFLTIVVVLLGSYFGY 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 469 LVSSFDSSrYSFSLGILSFVSFAGSMWFMPFISTKFISYFPLKFGYYSSKNFDYGWGELLGGQGLYKLFIYFINYIQGWY 548
Cdd:pfam06455 81 ELSNLSNK-QLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 1494235700 549 DLNFKIYLLTFIFWMFILIILF 570
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
50-364 |
2.38e-42 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 162.62 E-value: 2.38e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 50 LDWMSLIFMSFVLIISSLVIYYSEDYMSGEK-NMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY-YQ 127
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 128 NVKSYGAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPA 203
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYN-IGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 282
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNmYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 283 ILSMGyPGLA------------------FFHLLSHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK12646 316 MVGIG-GGYAqhqqdaiasiyvfvlfaaLFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAA 393
|
330 340
....*....|....*....|
gi 1494235700 345 LSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12646 394 LSMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-395 |
3.55e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 159.70 E-value: 3.55e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIYYSEDYM-SGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 126 YQNVK-SYGAGMLTALSNRIGDVAILISIAWMLNF-GSWNYiyyYDFISNSFEMKMITMLIV--LAG-MTKSAQIPFSSW 200
Cdd:PRK12644 149 YAERAaSRRAALQALLVTTAGGLAMLVGIIILGQAaGTYRL---SELLADPPTGPAVSVAVVliLVGaLSKSAIVPFHFW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 201 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK12644 226 LPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFaDVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 280 MMSILSMGYP-----GLAFfhLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLA 354
Cdd:PRK12644 306 LTVLVGIGTRdaalaGLAM--LLAHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLL 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1494235700 355 GFYSKDLILEMV----CLSWVNFLIFFLYFFSTGLTASYSFRLFY 395
Cdd:PRK12644 383 GFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
47-400 |
4.49e-41 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 158.94 E-value: 4.49e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMV-RFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 126 -YQNVKS-YGA--GMLTALSNRIGDVAILISIAWMLnfGSWN---YIYYYDFISNS--FEMKMItmLIVLAGMTKSAQIP 196
Cdd:PRK12645 153 wYEREASrYGAqkSMLITVFGGLSMLGGFILLYIMT--GSFSireMIANADEIQNSplFIPAMI--LILLGAFTKSAQFP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 197 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIG-WFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLS 275
Cdd:PRK12645 229 FYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWfWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 276 QLGLMMSILSMGYPGL----------------AFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVC 339
Cdd:PRK12645 309 QLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTI 387
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 340 FNVSSLSLCGMPFLAGFYSKDLILE-MVCLSWVNF--------LIFFLYFFSTGLTASYSFRLFYYSMSG 400
Cdd:PRK12645 388 ALIGALSMAGLPPFNGFLSKEMFFEsMLNATEANLfsldtwgvLFPVIAWVASVFTFVYSIIFIFKTFFG 457
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
41-363 |
4.62e-39 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 149.35 E-value: 4.62e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 41 GSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMS-------GEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWD 113
Cdd:PRK06525 64 GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 114 GLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMlnFGSWNYIYYYDFISNSFEMKMITMLIVL-AGMTKS 192
Cdd:PRK06525 144 ITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATL--FLQTGTFALSALSGLHGSLKYLVFLGILfAAWGKS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 193 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCY--NIGWFLLLIGCLTMFMAGLGANFEFDLKKIIA 270
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 271 LSTLSQLGLMMSILSMGYPGL------AFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK06525 302 YSTITQLGYMFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAA 380
|
330
....*....|....*....
gi 1494235700 345 LSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06525 381 LAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-364 |
2.14e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 141.89 E-value: 2.14e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 44 VVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLV 123
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 124 IYYQN--VKSYGAG---MLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFISN--SFEMKMITMLIVLAGM-TKSAQI 195
Cdd:PRK12649 152 GYWRHrpESVYGATkslLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENikGHPLFLITLILIFIGAaAKSAQG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 196 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNiGWFLLL--IGCLTMFMAGLGANFEFDLKKIIALST 273
Cdd:PRK12649 232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 274 LSQLGLMMSIL---SMGYPGLAF----FHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLS 346
Cdd:PRK12649 311 ISQLAYLMTMYgytTYHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALA 389
|
330
....*....|....*...
gi 1494235700 347 LCGMPFLAGFYSKDLILE 364
Cdd:PRK12649 390 MAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-396 |
7.95e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 131.54 E-value: 7.95e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIYYSedYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 127 QNVKSYGAGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAM 205
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 206 AAPTPVSALVHSSTLVTAGVYLLIRFS------PMLDCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 280 MM---SILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGF 356
Cdd:PRK08375 310 ILlglALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1494235700 357 YSK-DLILEMVCLSWVNFLIFFLyfFSTGLTASYSFRLFYY 396
Cdd:PRK08375 389 VSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYR 427
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-312 |
4.20e-27 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 115.18 E-value: 4.20e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 53 MSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIiVLMFIL-SMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKs 131
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVR-ALAGVLaAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 132 ygAGMLTA----LSNRIGDVAILISIA-WMLNFGSWNYIYYYDFISN---SFEMKMITMLIVLAGMTKSAQIPFSSWLPA 203
Cdd:PRK08168 148 --FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHLAAqgaSPSLQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 204 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLDCYNIG-WFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 282
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260 270
....*....|....*....|....*....|
gi 1494235700 283 ILSMGYPGLAFFHLLSHALFKALLFMCAGS 312
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
5.22e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 112.52 E-value: 5.22e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 46 MTLILDWMSLIFMSFVLIISSLVIYYSEDY---MSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 123 VIY-YQNVKSYGAGMLTALSNRIGDVAILISIAWM-LNFGSWNYIYYYdfiSNSFEMKMITMLIVLAGMTKSAQIPFSSW 200
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 201 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLDCYNIGW--FLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 278 GLMM--------------SILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDsQDIRFMGSIVNFMPLTSVCFNVS 343
Cdd:PRK08667 307 GIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|.
gi 1494235700 344 SLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYE 406
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
91-369 |
2.11e-25 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 110.75 E-value: 2.11e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 91 MFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKS-YGAGMLTALSNRIGDVAILISIAWMlnfgsWNYIYYYD 169
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 170 FIS------NSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLDCYNIGW 242
Cdd:PRK06521 196 FAAmraahlSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWW 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 243 ---FLLLIGCLTMFMAGLGANFEFDLKKIIALST-------LSQLGLMMSILSMGYPGLA-------FFHLLSHALFKAL 305
Cdd:PRK06521 275 wgvLVLALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSL 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1494235700 306 LFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLS 369
Cdd:PRK06521 355 LFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
140-387 |
3.33e-24 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 106.92 E-value: 3.33e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 140 LSNRIGDVAILISIAWMLNF-GSWNYIYYYDFISN-SFEMKMITM--LIVLAG-MTKSAQIPFSSWLPAAMAAPTPVSAL 214
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAATaNLDPLTATLlgLALIAGpTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 215 vHSSTLVTAGVYLLIRFSPMLDCYNIGW-FLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGLAF 293
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSPVALtVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 294 FHLLSHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSkdlILEMVCLSWVNF 373
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVS 412
|
250
....*....|....*
gi 1494235700 374 LIFFLYF-FSTGLTA 387
Cdd:PRK07390 413 PWLVGVLlLVNALTA 427
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-395 |
3.71e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 106.05 E-value: 3.71e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 48 LILDWMSLIFMSFVLIISSLVIYYSEDYMSGE--KNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06589 79 LHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGH 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 126 YQNVKSYGAGmLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAM 205
Cdd:PRK06589 159 TRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 206 AAPTPVSALVHSSTLVTAGVYLLIR-------FSPMLDCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 279 LMM---SILSMGYPGLAFFHLLSHALFKALLFMCAGSmIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:PRK06589 318 LALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSG 396
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1494235700 356 FYSKDLILEMVCLS---WVNFLIFFLYFFSTGLTASYSFRLFY 395
Cdd:PRK06589 397 FISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILS 439
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-364 |
5.16e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 105.42 E-value: 5.16e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFM---SFVLIISSLVIYysedymsgEKNMVRFIIIVLMFIL-SMAFLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK07234 62 TLRADALSGYFIltnALVTLAVIFYCW--------ESAKTRFFYAQLLILHgSVNAAFVCADLISLYVALEVLSIATFLL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 123 VIYYQNVKSYGAGM-LTALSNrIGDVAILISIAwmlnfgswnyIYYYDfiSNSFEMKMITM-------LIVLAGMTKSAQ 194
Cdd:PRK07234 134 VAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAV----------LVYQA--NGTFAFSGLATadpeafaLIALGLLVKGGI 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLDCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTL 274
Cdd:PRK07234 201 FVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA--LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTI 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 275 SQLGLMMSILSMGypglAFFHlLSHALFKALLFMCAGSmIHNLNDSQDIRFMGSIVNFMPLTsvcfnVSSLSLCGMPFLA 354
Cdd:PRK07234 279 SQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLA 347
|
330
....*....|
gi 1494235700 355 GFYSKDLILE 364
Cdd:PRK07234 348 GFVSKVLTLK 357
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-366 |
1.28e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 104.41 E-value: 1.28e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 50 LDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 129
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 130 -KSYGAGMLTALSNRIGDVAILISIAWML-NFGSWNYIYYYDFIS-NSFEMKMITMLIVLAGMT-KSAQIPFSSWLPAAM 205
Cdd:PRK08376 168 wEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSeNPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAY 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 206 -AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLDCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK08376 248 pAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 280 MM-----SILSMGYPGL----------AFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK08376 326 MLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIGA 404
|
330 340
....*....|....*....|..
gi 1494235700 345 LSLCGMPFLAGFYSKDLILEMV 366
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYESS 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-395 |
3.93e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 103.13 E-value: 3.93e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 127 QNVK-SYGAGMLTALSNRIGDVAILISIAWMLN-FGSWN--------YIYYYDFISNSFEMKMITMLIVLAGMT-----K 191
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALwaftiK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 192 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF------SPMLDCYNIGWFLLLI---GCLTMFMAGLGANF 261
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILiilGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 262 EFDLKKIIALSTLSQLGLMMSILSMGYP---GLAFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSV 338
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1494235700 339 CFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTgLTASYSFRLFY 395
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
40-318 |
2.94e-19 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 90.87 E-value: 2.94e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 40 NGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMvRFIIIVLMFILSMAFLI-ISPNLISILLGWdglGLV 118
Cdd:PRK08601 60 NGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSY-RKYFALFTFTTGFASLAwLSGDLRLMALCW---GAT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 119 SYCLVIYYQNVKSYG----AGMLTALSNRIGDVAILISIAWM-LNFGSWnyiYYYDFISN-------SFEMKMITMLIVL 186
Cdd:PRK08601 136 LLGLTLLIGLNKGWKvareAAKISGMLFLISWLALALAIVWLfIATGEW---QLTSVLSNenlaqlgTWEKTGINLLLIL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 187 AGMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLDcYNIGWFLLLIGCLTMFMAGLGANF-EFDL 265
Cdd:PRK08601 213 AVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLIGTGISLvQVDY 290
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1494235700 266 KKIIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLN 318
Cdd:PRK08601 291 KRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
56-393 |
1.67e-18 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 88.67 E-value: 1.67e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 56 IFMSFVLIISSLVIYYSEDYMSGEKnMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAG 135
Cdd:PRK08377 82 LFVLIIAIVSFIMSIFSLKAVEVEP-IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEAS 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 136 MLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFIS--NSFEMKMITMLIVLAGMTKSAQIPFSSWLPAA-MAAPTPV 211
Cdd:PRK08377 161 MKYIVLGGIGSSFFLIGVALIYGaTGTLNMAHIAQLAGtiDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAyQAAPHPI 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 212 SALVhSSTLVTAGVYLLIRFSPMLDCYN----IGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMG 287
Cdd:PRK08377 241 TVMF-SAFVVKAGLYAMARILYLMQNANgwssVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALG 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 288 YPG---LAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILe 364
Cdd:PRK08377 320 TQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKR-MPLTALALTIGALSTVGIPLFNVFWSKFRII- 397
|
330 340
....*....|....*....|....*....
gi 1494235700 365 MVCLSWVNFLIFFLYFFSTGLTASYSFRL 393
Cdd:PRK08377 398 LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
37-395 |
1.81e-18 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 88.90 E-value: 1.81e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 37 FSLNGSMVVMTLILDWMSLIFMSFVLIISSLVIYYSEDYmsGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLG 116
Cdd:PRK08668 54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSE--KTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 117 LVSYcLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFISN--SFEMKMI-TMLIVLAGMTKS 192
Cdd:PRK08668 132 FSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINdtSTGFALIvFLFLLAFGVAKA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 193 AQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLDCYNI-------------GWFLLLIGCLTMFMAGLG 258
Cdd:PRK08668 211 GIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvplfNYILAWLGNISIIVGTLM 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 259 ANFEFDLKKIIALSTLSQLGLMMSILSMGYP---GLAFFHLLSHALFKALLFMCAGSMIHNLNDSQdIRFMGSIVNFMPL 335
Cdd:PRK08668 290 AILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTK-ISEMGGLIEKMPF 368
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 336 TSVCFNVSSLSLCGMPFLAGFYSKDLILEMVcLSWVNFLIFFLYFFSTGLTASYSFRLFY 395
Cdd:PRK08668 369 TFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-363 |
3.09e-18 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 88.03 E-value: 3.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 105 LISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAW-MLNFGSWnyiyyyDFISNSFEMKMITML 183
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSF------AFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 184 IVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmldcyniGWFLLL-IGCltmFMAGLGANF- 261
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIyIGA---AMAVYGVFFa 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 262 --EFDLKKIIALSTLSQLGLMMSILSMGYP-GL--AFFHLLSHALFKALLFMCAGSMIHNLNDSqDIRFMGSIVNFMPLT 336
Cdd:PRK12668 259 llENDLRRLLSYHIVSQVGYMVAGIGIGTAlAIngAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLT 337
|
250 260
....*....|....*....|....*..
gi 1494235700 337 SVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12668 338 ALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
196-394 |
4.28e-18 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 87.44 E-value: 4.28e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 196 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFS-PML--DCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIAL 271
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlPLFpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 272 STLSQLGLM-MSILSMGYPGL--AFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:COG1008 306 SSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALASL 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1494235700 349 GMPFLAGFYSKDLILemVCLSWVNFLIFFLYFFSTGLTASYSFRLF 394
Cdd:COG1008 385 GLPGTSGFVGEFLVL--LGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-359 |
4.17e-16 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 80.93 E-value: 4.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVR-FIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLV-I 124
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 125 YYQNVKSYGAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYDFISNSFEMK---MITMLIVLAGMT-KSAQI 195
Cdd:COG1007 145 RRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLAGIAAALAAGGANSpllLLGLVLVLAGLAfKLSAV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 196 PFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIR-FSPMLDCYNIGWFLLL--IGCLTMFMAGLGANFEFDLKKIIA 270
Cdd:COG1007 221 PFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWQLLLavLAVLSMTVGNLAALAQTNVKRMLA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 271 LSTLSQLG-LMMSILSMGYPGL--AFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSL 347
Cdd:COG1007 299 YSSIAHAGyLLLGLAAGTPLGVsaALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSL 378
|
330
....*....|..
gi 1494235700 348 CGMPFLAGFYSK 359
Cdd:COG1007 379 AGIPPTAGFFGK 390
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-394 |
9.33e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 76.90 E-value: 9.33e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 50 LDWMSLIFMSFVLIISSLVIYYSedYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 129
Cdd:TIGR01972 75 VDGISLLLVLLTALLTLLAILAS--WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGP 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 130 KSYGAGMLTALSNRIGDVAILISIAWM--LNFGSWNYIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMA- 206
Cdd:TIGR01972 153 NRIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVe 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 207 APTPVSALVhSSTLVTAGVYLLIRFS-PML-DCYNIG-WFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGL-MMS 282
Cdd:TIGR01972 233 APTAGSVIL-AGVLLKMGTYGFLRFNlPLFpDASLYFaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 283 ILSMGYPGL--AFFHLLSHALFKALLFMCAGsMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKD 360
Cdd:TIGR01972 312 IFSFNELGIsgAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
330 340 350
....*....|....*....|....*....|....
gi 1494235700 361 LILemVCLSWVNFLIFFLYFFSTGLTASYSFRLF 394
Cdd:TIGR01972 391 LIL--LGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
195-356 |
2.36e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 76.02 E-value: 2.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 195 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDCYNIGW--FLLLIGCLTMFMAGLGANFEFDLKKIIAL 271
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWWgvALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 272 STLSQLGLMMSILSMGYPGLA--------------FFHLLSHALFKALLFMCAGSMIHNlNDSQDIRFMGSIVNFMPLTS 337
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 1494235700 338 VCFNVSSLSLCGMPFLAGF 356
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
176-363 |
9.93e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 73.83 E-value: 9.93e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 176 EMKMITMLIVLAGMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML---DCYNIGWFLLLIGCLTM 252
Cdd:PRK12663 205 TLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqERELLHPLLATMAAITM 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 253 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGL---AFFHLLSHALFKALLFMCAGSMIHnLNDSQDIRFMGSI 329
Cdd:PRK12663 284 VIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGL 362
|
170 180 190
....*....|....*....|....*....|....
gi 1494235700 330 VNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12663 363 YRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
140-401 |
5.12e-13 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 71.39 E-value: 5.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 140 LSNRIGDVAILISIAWM-----LNFGSWNYIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMA-APTPVSA 213
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 214 LvHSSTLVTAGVYLLIRFS-PMLD--CYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILSMGYP 289
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFPdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 290 GL--AFFHLLSHALFKALLFMCAGSMIHNLNdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILemVC 367
Cdd:PRK05846 327 GIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LG 403
|
250 260 270
....*....|....*....|....*....|....
gi 1494235700 368 LSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGD 401
Cdd:PRK05846 404 SFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
180-405 |
6.63e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 71.13 E-value: 6.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 180 ITMLIVLAgmTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDCYNIGW---FLLLIGCLTMFMA 255
Cdd:PRK07691 213 ILFLFVFA--TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 256 GLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGL---AFFHLLSHALFKALLFMCAGSMIHnLNDSQDIRFMGSIVNF 332
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKR 368
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1494235700 333 MPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEmVCLSWVNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFY 405
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGY 440
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-364 |
2.54e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 69.23 E-value: 2.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 182 MLIVLAGMtKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLDCYNIGW-FLLLIGCLTMFMAGLGA 259
Cdd:PRK12665 214 VLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDtLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 260 NFEFDLKKIIALSTLSQLGLMMSILSMGYP-GL--AFFHLLSHALFKALLFMCAGsMIHNLNDSQDIRFMGSIVNFMPLT 336
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVaGLsgAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLL 370
|
170 180
....*....|....*....|....*...
gi 1494235700 337 SVCFNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12665 371 AVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
177-394 |
4.04e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 68.63 E-value: 4.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 177 MKMITMLIVLAGM-TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDCYNIGW----FLLLIGCL 250
Cdd:PRK08676 204 VLGASFLFIFIGFlAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEqfsnVLIGLGIF 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 251 TMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGLAF---FHLLSHALFKALLFMCAGsMIHNLNDSQDIRFMG 327
Cdd:PRK08676 283 SIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIF 361
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1494235700 328 SIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL-EMVCLS-WVNFLIFFLYFFSTGLTASYSFRLF 394
Cdd:PRK08676 362 DVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
190-363 |
8.53e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 67.65 E-value: 8.53e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 190 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpMLDCYNIGW-----FLLLIGCLTMFMAGLGANFEF 263
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYY-ILIDAAIGSdfpgrLLLIFGLLSVLVAAFFLLRQR 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 264 DLKKIIALSTLSQLGLMMSILSMGYPgLAFF----HLLSHALFKALLFMCAGSMIHNLnDSQDIRFMGSIVNFMPLTSVC 339
Cdd:PRK06458 304 DIKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSPLTGWG 381
|
170 180
....*....|....*....|....
gi 1494235700 340 FNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06458 382 LMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-359 |
2.02e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 63.30 E-value: 2.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIYYSEDYMSgEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 126 YQNVKSYGAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYDFISNSFEMK---MITMLIVLAGMT-KSAQIP 196
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGAtGSLSFAGIAKALADGSGNSlllLFGLVFLLVGLAfKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 197 FSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPM-LDCYNIGWFLLLIG--CLTMFMAGLGANFEFDLKKIIALS 272
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVaFGGLSEDWQQVLAIiaIASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 273 TLSQLG-LMMSILSMGYPGL--AFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCG 349
Cdd:PRK05777 302 SIAHAGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|
gi 1494235700 350 MPFLAGFYSK 359
Cdd:PRK05777 382 IPPTAGFWGK 391
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-359 |
6.28e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 55.40 E-value: 6.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 51 DWMSLIFMSFVLIISSLVIYYSEDYM-SGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY-QN 128
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 129 VKSYGAGMLTALSNRIGDVAILISIAWM--LNFGSWNYIYYYDFISNSFEMKMITMLIVLAGMT-----KSAQIPFSSWL 201
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 202 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLDCYNIG-WFLLL--IGCLTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSSNeWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 278 GLMMSILSMGYPGLAFFHLLSHALFkaLLFMCAGS----MIHNLNDSQD-IRFMGSIVNFMPLTSVCFNVSSLSLCGMPF 352
Cdd:CHL00049 317 GYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
....*..
gi 1494235700 353 LAGFYSK 359
Cdd:CHL00049 395 LAGFFGK 401
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-359 |
8.71e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 54.74 E-value: 8.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 49 ILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQN 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 129 VKSYGAGMLTALSNRIGDVAILISIAWM------LNFGSWNYIYYYDFISNSfeMKMITMLIVLAGMTKSAQIPFSSWLP 202
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGATFYLIGIGFLyaitgtLNMGDMFLIIQDLPTNRA--IQIGVLFIMVGLFIKAALFPFHKWLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 203 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYNIGWFLLLIGCLTMFMAGLG-------ANFEFDLKKIIALSTLS 275
Cdd:PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAivfgsvlAILSKDIKRIFAYSSIS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 276 QLGLMMSILSMG-YPGL--AFFHLLSHALFKALLFMCAGSMIHNLnDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPF 352
Cdd:PRK12662 314 HIGYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
....*..
gi 1494235700 353 LAGFYSK 359
Cdd:PRK12662 393 TSGFVAK 399
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-363 |
1.75e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 54.09 E-value: 1.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 182 MLIVLAGMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPML------DCYNIGW-FLLLIGCLTMF 253
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagASAGFGQdWLLPGGLATLA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGL---AFFHLLSHALFKALLFMCAGSM----------------I 314
Cdd:PRK12666 292 FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeL 371
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1494235700 315 HNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12666 372 YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
57-364 |
9.60e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 51.71 E-value: 9.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 57 FMSFVLIISSLVIYYSEDYMSGEKNMVRFIIIVLMF-ILSMAFLIISPNLISILLGWDGLGLVSYCLVIYYQNvKSYGAG 135
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 136 MLTALSNrigdvailISIAWMLNFGSWNYIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPF--SSWLPAAMAAPTPVSA 213
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 214 LVHSSTLVTAGVYLLIRFSPMLDCYNIGWF---LLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM---- 286
Cdd:PRK06459 196 AILSATMTLMGVYGILKMTILTQTIPIGYFgltILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvt 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 287 --------GYPGLA-FFHLLSHALFKALLFMCAGSMihnlnDSQDIRFMGSIVNFMplTSVCFNVSSLSLCGMPFLAGFY 357
Cdd:PRK06459 276 kqlitsieHFSLITvILYSFAHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGGV 348
|
....*..
gi 1494235700 358 SKDLILE 364
Cdd:PRK06459 349 ASWLLLE 355
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
151-440 |
5.45e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 48.81 E-value: 5.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 151 ISIAWMLNFGSWNYIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 230
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 231 FSPMLDcyniGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGyPGLAFFHLLSHALFKALLFMca 310
Cdd:MTH00200 145 LAPALN----SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVFL-- 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 311 gsmIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILemvclswVNFLIFFLYFFSTGLTASYS 390
Cdd:MTH00200 218 ---LLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1494235700 391 FRLFYY-------SMSGDNNFYSSFSFSDNSYYISFGMIGLLIFAVFGGSLLSWLIF 440
Cdd:MTH00200 288 LSLFFYlrlsyltLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
191-358 |
9.14e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.49 E-value: 9.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 191 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS-PMLDCYNIGW--FLLLIGCLTMFMAGLGANFEFDLK 266
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNvQMLPDAHVYFapALAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 267 KIIALSTLSQLGLMM----SILSMGYPGlAFFHLLSHALFKALLFMCAGSM---IHNLNdsqdIRFMGSIVNFMPLTSVC 339
Cdd:PRK12561 277 RRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFAL 351
|
170
....*....|....*....
gi 1494235700 340 FNVSSLSLCGMPFLAGFYS 358
Cdd:PRK12561 352 FTASSMASLALPGMSGFVS 370
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
46-382 |
1.21e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.10 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 46 MTLILDWMSLIFMSFVLIISSLVIYyseDYMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 126 YQNVKSYGAGMLTALSNRIGDVAILISIAWMLNF-GSWNY--IYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLP 202
Cdd:PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNItdIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 203 AAMAAPTP--VSALVHSS---TLVTAGVYLLIRFSPMLDCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK06277 223 SDIYAKAKpfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQG 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 278 GLMMSILSMGYP---GLAFFHLLSHALFKALLFMCAGSmIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLA 354
Cdd:PRK06277 303 GYVAAGLALGTPlgiVAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1494235700 355 GFYSKDLILE-------------MVCLSWVNFLIFFLYFFS 382
Cdd:PRK06277 382 GFQSKLMLAQaamqanmpelaiiMIIVSIGTFVSMMKAFYL 422
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
181-364 |
1.44e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 47.51 E-value: 1.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 181 TMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYnigwFLLLIGCLTMFMAGLGAN 260
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 261 FEFDLKKIIALSTLSQLGLMMSILSMGyPGLAFFHLLSHALFKALLFMcagsmIHNLNDSQDIRFMGSIVNFMPLTSVCF 340
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....
gi 1494235700 341 NVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-397 |
2.23e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 47.03 E-value: 2.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 47 TLILDWMSLIFMSFVLIISSLVIyysedyMSGEKNMVRFIIIVLMFILSMAFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12664 33 VYNLDLVLFIVLSFSLALIFLYI------LPIKNMRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 127 QNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYyydfisnsfemkmiTMLIVLAGMTKSAQIPFSSWLPAAMA 206
Cdd:PRK12664 107 CPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYC--------------KLLFMLGLLINCACFPASSWVVDAYP 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 207 APTPVSALVHSSTLVTAGVYLLIRFspmLDCYNIgwfLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM 286
Cdd:PRK12664 173 AASNFGIIVLSLFTTKVAALVLLLF---FSGEEI---LLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 287 GYP-----GLAFFHLLSHALFKALLFMCAGSMIhNLNDSQDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDL 361
Cdd:PRK12664 247 SGSsgvaiGILILQIVLSVVYQTLLFMVADSVI-NRTRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSL 324
|
330 340 350
....*....|....*....|....*....|....*...
gi 1494235700 362 ILEMVCLSWVNFLIFFLYF--FSTGLTASYSFRLFYYS 397
Cdd:PRK12664 325 ITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYA 362
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
173-364 |
9.01e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 44.91 E-value: 9.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 173 NSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDCYnigwFLLLIGCLTM 252
Cdd:MTH00070 87 MNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLST 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 253 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGyPGLAFFHLLSHALFKALLFMcagsMIHNLNDSQDIRFMGSIVNF 332
Cdd:MTH00070 163 LIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKN 237
|
170 180 190
....*....|....*....|....*....|..
gi 1494235700 333 MPLTSVCFnVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00070 238 PTLTSMMM-LTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
174-389 |
1.82e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.32 E-value: 1.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 174 SFEMKMITMLIVLAGM-TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLDCYNIGWFLL-----LI 247
Cdd:PRK07363 200 SLNTQLILLTGLLLGFgIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglaII 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 248 GCLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGL---AFFHLLSHALFKALLFMCAGsMIHNLNDSQDIR 324
Cdd:PRK07363 278 GTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLD 356
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1494235700 325 FMGSIVN---FMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMvclSWVNFLI-FFLYFFSTGLTASY 389
Cdd:PRK07363 357 VLNGLMNpirGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQG---SFSTFPIpTLLCIVASGLTAVY 422
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
195-389 |
2.02e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.92 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 195 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSpmLDCYNIGW-----FLLLIGCLTMFMAGLGANFEFDLKKI 268
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFG--VGLFPEAWvylapWLATWAVVSVLYGASCAIAQKDMKKM 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 269 IALSTLSQLGLMMSILSMGYP---GLAFFHLLSHALFKALLFMCAGsMIHNLNDSQDIRFMGSIVN---FMPLTSVCFNV 342
Cdd:PRK06473 299 VAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNperGLPITGSLMIL 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1494235700 343 SSLSLCGMPFLAGFYSKDLILEMvclswvNFLIF----FLYFFSTGLTASY 389
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLVFRG------SFPIFpvqtLLCMIGTGLTAVY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
191-447 |
2.20e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 43.90 E-value: 2.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLDCYNIGW--FLLLIGCLTMFMAGLGANFEFDLKK 267
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFapLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 268 IIALSTLSQLGLM-MSILSMGYPGL--AFFHLLSHALFKALLFMcAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:MTH00204 302 LIAYSSVAHMGLVpLGLFTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLS 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 345 LSLCGMP----FLAGFYSKDLILEMvclswvNFLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFSDNSYYIsFG 420
Cdd:MTH00204 381 LANMGFPlscnFVGEFFSLLAAFEY------SLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRREL-LA 453
|
250 260
....*....|....*....|....*..
gi 1494235700 421 MIGLLIFAVFGGSLLSWLIFPIPQSIY 447
Cdd:MTH00204 454 ILPLIIAIFLLGIVPFIIIDLVKNSLV 480
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
170-440 |
3.18e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 43.27 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 170 FISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspmldcyNIGWFLLLIGC 249
Cdd:MTH00160 79 MLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL-------INNNFIIIIII 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 250 LTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPGLAFFHLLSHALFKALLFMCAGSMIHNLNDSQDIRFMGSI 329
Cdd:MTH00160 152 LSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKK 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 330 VNFMpltsvcFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNFLIFFLYFFSTgLTASYSFRLFYYSMSGDNNFYSSFS 409
Cdd:MTH00160 232 IKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRISYSSLMLNYNKNKWNL 304
|
250 260 270
....*....|....*....|....*....|.
gi 1494235700 410 FSDNSYYISFGMIgLLIFAVFGGSLLSWLIF 440
Cdd:MTH00160 305 KKKKNKFSLILNF-LSFISLFGLILSSLLFL 334
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
46-85 |
6.72e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 37.79 E-value: 6.72e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1494235700 46 MTLILDWMSLIFMSFVLIISSLVIYYSEDYMSGEKNMVRF 85
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-428 |
1.01e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.83 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 55 LIFMSFVLIISSLVIYYSEDYMSgekNMVRFIIIVLMFILSMAFLIISPNLISILlgWDGLGLVSYCLV-IYYQNVKSYG 133
Cdd:MTH00226 108 IILTGFIVPCSILISWHSVKYLT---KSFLICMLILEFLLYAVFSVLDIFMFYIL--FEGVLIPMYLILgIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 134 AGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYY--DFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMAAPTP 210
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLYNIhGTTDYLTLAscSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPV 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 211 VSALVHSSTLVTAGVYLLIRFS-PM--LDCYNIGWFLLLIGCLTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSM 286
Cdd:MTH00226 263 AGSVLLAGILLKLGGYGLVRLSwPIlpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVsITLVTH 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 287 GYPGL--AFFHLLSHALFKALLFMCAgSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILe 364
Cdd:MTH00226 343 DIIGLtgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI- 420
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1494235700 365 mvcLSWVNFLIFFLYFFSTG--LTASYSFRLFYYSMSGDNNFYSSFSFSDN--SYYISFGMIGLLIFA 428
Cdd:MTH00226 421 ---LSSFNWNPIIGVFVCSGviLSAVYSFYFANRVTFGAPGNLITFARDVNrrEFYITASMVFFAFLI 485
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
144-420 |
7.29e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 39.26 E-value: 7.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 144 IGDVAILISIAWMLNF-GSWNYIYYYDFISNSFEMKMITMLIVLAGMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 222
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 223 AGVYLLIRFSPMLDCYNIGWFLLLIGCLTMFM---AGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGYPGL--AFFHL 296
Cdd:MTH00217 251 LGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAiiyGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFLM 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235700 297 LSHALFKALLFMcAGSMIHNLNDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFlagfySKDLILEMVCLswvnfLIF 376
Cdd:MTH00217 331 LAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPL-----SCNFVGEFLSL-----LAA 399
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1494235700 377 FLYFFSTGLTASYSFRLfyySMSGDNNFYSSFSFSDNSYYISFG 420
Cdd:MTH00217 400 FEYSYIVGVLASLGMVL---SAGYSIYLYNRVCFGAPSKYLYFS 440
|
|
| |
