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Conserved domains on  [gi|1496231206|gb|AYN73245|]
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ATP synthase F0 subunit 6 (mitochondrion) [Pollostacris sp. OR322]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 3.63e-101

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 292.46  E-value: 3.63e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   1 MMTNLFSTFDPSTNiLNLSLNWMSTFLGLMIIPSMFWLNQSRINILWNKTNSNLHNEFKTLLGqKSFNGTTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  81 MLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1496231206 161 RLAANMIAGHLLLTLLGNTGPSMTMNLISLLIIGQMMLLMLESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 3.63e-101

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 292.46  E-value: 3.63e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   1 MMTNLFSTFDPSTNiLNLSLNWMSTFLGLMIIPSMFWLNQSRINILWNKTNSNLHNEFKTLLGqKSFNGTTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  81 MLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1496231206 161 RLAANMIAGHLLLTLLGNTGPSMTMNLISLLIIGQMMLLMLESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 1.94e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 155.83  E-value: 1.94e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   5 LFSTFDPST-NILNLSLNWMSTFLGLMIIPSMFWLN----QSRINILWNKTNSNLHNEFKTLLGQKSFNGTTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSSLSrwliPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  80 MMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1496231206 160 VRLAANMIAGHLLLTLLGNTGPSMTMNLI-SLLIIGQMMLLMLESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIfALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-222 8.66e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.77  E-value: 8.66e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  73 IFISIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNI 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPSMTMNLISLLIIGQMMLLMLESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
54-222 9.05e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 99.49  E-value: 9.05e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  54 LHNEFKTLLGQKSFNGTTFIFISIFIMMLFNNFMGLF---PYIFTSTSHLALTFAIALPMWLSFMMFGWINH-TKHMFAH 129
Cdd:pfam00119  41 VDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKK 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 130 LVPQGTPPALMSFMVLIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMTMNLISLLII---GQMMLLMLESAVA 206
Cdd:pfam00119 121 LFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVA 200

                         170
                  ....*....|....*.
gi 1496231206 207 MIQAYVFSILSTLYSS 222
Cdd:pfam00119 201 FIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-220 2.70e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 90.13  E-value: 2.70e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  76 SIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINH-TKHMFAHLVPQGTPPaLMSFMVLIETISNIIR 154
Cdd:COG0356    63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELAR 141

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1496231206 155 PGTLAVRLAANMIAGHLLLTLLGNTGPSMTMNLISLLIigQMMLLMLESAVAMIQAYVFSILSTLY 220
Cdd:COG0356   142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 3.63e-101

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 292.46  E-value: 3.63e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   1 MMTNLFSTFDPSTNiLNLSLNWMSTFLGLMIIPSMFWLNQSRINILWNKTNSNLHNEFKTLLGqKSFNGTTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  81 MLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1496231206 161 RLAANMIAGHLLLTLLGNTGPSMTMNLISLLIIGQMMLLMLESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 8.10e-53

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 169.83  E-value: 8.10e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   1 MMTNLFSTFDP--STNILNLSLNWMSTFLGLMIIPSMFWLNQSRINILWNKTnSNLHNEFKTLLGQKSFNGTTFIFISIF 78
Cdd:MTH00176    1 MLVDLFSSFDPpnKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMF-STFLPEMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  79 IMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 159 AVRLAANMIAGHLLLTLLGNTGPSMTMNLI---SLLIIGQMMLLMLESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMWGLLPVSPligFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 1.94e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 155.83  E-value: 1.94e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   5 LFSTFDPST-NILNLSLNWMSTFLGLMIIPSMFWLN----QSRINILWNKTNSNLHNEFKTLLGQKSFNGTTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSSLSrwliPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  80 MMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1496231206 160 VRLAANMIAGHLLLTLLGNTGPSMTMNLI-SLLIIGQMMLLMLESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIfALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-222 8.66e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.77  E-value: 8.66e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  73 IFISIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNI 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPSMTMNLISLLIIGQMMLLMLESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 1.17e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 143.72  E-value: 1.17e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   1 MMTNLFSTFDPSTNILNLSLN----WMSTFLGLMIIPSMFWLNQSRINILWNKTNSNLHNEFKTLLGqKSFNGTTFIFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  77 IFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPG 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 157 TLAVRLAANMIAGHLLLTLLGNTGPSMTMNLIS---LLIIGQMMLLMLESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIGIYAASALFSSISstiLLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 1.09e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 133.45  E-value: 1.09e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   1 MMTNLFSTFDPSTNILNL--SLNWMSTFLGLMIIPSMFWLNQSRINILWNKTNSNLHNEFKTLLGqKSFNGTTFIFISIF 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  79 IMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1496231206 159 AVRLAANMIAGHLLLTLLGNTGPSMTMNLIS----LLIIGQMMLLMLESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVvsllLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 1.17e-37

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 130.86  E-value: 1.17e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   3 TNLFSTFDPSTnILNLSLNWMSTFLGL---MIIPSMFWLNqSRINILWNKTNSNLhneFKTLLGQKSFNGTTFI--FISI 77
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWLP-SRSQSIWLTFRQEI---LKLIFQNTNPNTAPWAglLTTV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  78 FIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGT 157
Cdd:MTH00035   80 FILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIA 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 158 LAVRLAANMIAGHLLLTLLGNT----GPSMTMNLISLLIIGqmMLLMLESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00035  160 LGLRLAANLTAGHLLIFLLSTAiwelSNSPLISIITLIIFF--LLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 2.72e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 122.24  E-value: 2.72e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   1 MMTNLFSTFDpSTNILNLSLNWMSTFLGLMIIPSMfwLNQSRINILWNKTNSNLHNEFKTLLGQKSFNGT--TFIFISIF 78
Cdd:MTH00120    1 MNLNFFDQFS-SPELLGIPLILLAMLIPALLIPSP--KNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHkwALILTSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  79 IMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTL 158
Cdd:MTH00120   78 LLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1496231206 159 AVRLAANMIAGHLLLTLLGNTGPSM--TMNLISLLIIGQMMLLM-LESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00120  158 GVRLTANLTAGHLLIQLISTATLNLlpTMPTLSLLTLIILLLLTiLELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 4.40e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 121.59  E-value: 4.40e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   1 MMTNLFSTFDpSTNILNLSLNWMSTFLGLMIIPSMF--WLNQSRINILWNKTNSNLHNEFKTLlgQKSFNGTTFIFISIF 78
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLTnrWLNNRLSTLQSWFFGSFTFQLMQPI--NKKGHKWAVLFLSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  79 IMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTL 158
Cdd:MTH00179   78 LFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1496231206 159 AVRLAANMIAGHLLLTLLGNTGPSM--TMNLISLLI-IGQMMLLMLESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00179  158 GVRLTANITAGHLLMHLISSAVFVLmnFMGMVALLTlLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 73-223 3.72e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 113.81  E-value: 3.72e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  73 IFISIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNI 152
Cdd:MTH00132   72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1496231206 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPSM--TMNLISLLIIGQMMLL-MLESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00132  152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLlpLMPTVAILTATLLFLLtLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-223 1.36e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 110.06  E-value: 1.36e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206   1 MMTNLFSTFDPSTnILNLSLNWMSTFLGLMII--PSMFWLNqSRINILwnkTNSNLHNEFKTLLGQKSFNGT--TFIFIS 76
Cdd:MTH00073    1 MNLSFFDQFLSPT-LLGIPLIMLAMLLPWLLFptPTNKWLN-NRLSTL---QIWFLQNFTKQLMLPLNTPGHkwALILTS 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  77 IFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPG 156
Cdd:MTH00073   76 LMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPL 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 157 TLAVRLAANMIAGHLLLTLLGNTGPSM--TMNLISLLIIGQMMLL-MLESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00073  156 ALGVRLTANLTAGHLLIQLISTATLVLlpLMPTVSILTMIVLFLLtLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 71-220 3.24e-29

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 108.89  E-value: 3.24e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  71 TFIFISIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETIS 150
Cdd:MTH00101   69 SLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETIS 148

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1496231206 151 NIIRPGTLAVRLAANMIAGHLLLTLLGN-----TGPSMTMNLISLLIIgqMMLLMLESAVAMIQAYVFSILSTLY 220
Cdd:MTH00101  149 LFIQPMALAVRLTANITAGHLLIHLIGGatlalMSISTTTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP-synt_A pfam00119
ATP synthase A chain;
54-222 9.05e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 99.49  E-value: 9.05e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  54 LHNEFKTLLGQKSFNGTTFIFISIFIMMLFNNFMGLF---PYIFTSTSHLALTFAIALPMWLSFMMFGWINH-TKHMFAH 129
Cdd:pfam00119  41 VDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKK 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 130 LVPQGTPPALMSFMVLIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMTMNLISLLII---GQMMLLMLESAVA 206
Cdd:pfam00119 121 LFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVA 200

                         170
                  ....*....|....*.
gi 1496231206 207 MIQAYVFSILSTLYSS 222
Cdd:pfam00119 201 FIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 26-220 2.10e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 96.26  E-value: 2.10e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  26 FLGLMIIPSMFwlnQSRINILWNktnsNLHNEFKTLLGQKSFNGTTFIfISIFIMMLFNNFMGLFPYIFTSTSHLALTFA 105
Cdd:MTH00172   35 FKGIKLIPKRW---QSIIEIIYN----HFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVFTPTTHIVVTLG 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 106 IALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMTM 185
Cdd:MTH00172  107 LSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLC 186

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1496231206 186 -----NLISLLIIgqMMLLMLESAVAMIQAYVFSILSTLY 220
Cdd:MTH00172  187 asgflSLFPLLIM--VFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 75-220 1.14e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 94.69  E-value: 1.14e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  75 ISIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVLIETISNIIR 154
Cdd:MTH00175   87 LSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIR 166

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 155 PGTLAVRLAANMIAGHLLLTLLGNTGPSMTMNLISLLIIGQMMLLM----LESAVAMIQAYVFSILSTLY 220
Cdd:MTH00175  167 AISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-220 2.70e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 90.13  E-value: 2.70e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  76 SIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINH-TKHMFAHLVPQGTPPaLMSFMVLIETISNIIR 154
Cdd:COG0356    63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELAR 141

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1496231206 155 PGTLAVRLAANMIAGHLLLTLLGNTGPSMTMNLISLLIigQMMLLMLESAVAMIQAYVFSILSTLY 220
Cdd:COG0356   142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 4.78e-18

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 79.45  E-value: 4.78e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  73 IFISIFIMMLFNNFMGLFP-YIFTSTSHLALTFAIALPMWLSFMMFG-WINHTKHMFAHLVPQGTPpalmsFMVLIETIS 150
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 151 NIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMTMNLISLLIIGqMMLLMLESAVAMIQAYVFSILSTLY 220
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 52-220 6.82e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 76.90  E-value: 6.82e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  52 SNLHNEFKTLLGQKSFNGTTFIfISIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLV 131
Cdd:MTH00174   73 SHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILM 151

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 132 PQGTPPALMSFMVLIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMTMNLISLLIIGQMMLL----MLESAVAM 207
Cdd:MTH00174  152 PQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILifvtILEMAVAI 231

                         170
                  ....*....|...
gi 1496231206 208 IQAYVFSILSTLY 220
Cdd:MTH00174  232 IQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-220 1.09e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 63.22  E-value: 1.09e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  75 ISIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWINH-TKHMFAHLVpQGTPPALMSFMVLIETISNII 153
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHgIKGYLAHLT-GGTHWSLWIIMIPIEFIGLFT 253

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 154 RPGTLAVRLAANMIAGHLlltllgntgpsMTMNLISLLIIGQ-------------MMLLMLESAVAMIQAYVFSILSTLY 220
Cdd:PRK13419  254 KPFALTVRLFANMTAGHI-----------VILSLIFISFILKsyivavavsvpfaIFIYLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 35-223 4.17e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 54.21  E-value: 4.17e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  35 MFWLNQSRINILWNKTNSNLHNEFKTllgQKSFNGTTFIFISIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSF 114
Cdd:MTH00087   19 LLYFKESMLNVLVKKFFGLLIIVFSY---SNKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLST 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 115 MMFGWINHTKhmFAHLVPQGTPPALMSF-MVLIETISNIIRPGTLAVRLAANMIAGHLLLtllgntgpSMTMNLISLLII 193
Cdd:MTH00087   96 FLSFLSKSEK--FSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLIS--------SLLNFLGEKYVW 165

                         170       180       190
                  ....*....|....*....|....*....|
gi 1496231206 194 GQMMLLMLESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00087  166 LSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 75-220 1.13e-06

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 48.35  E-value: 1.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  75 ISIFIMMLFNNFMGLFPYI-----------------------------------FTSTSHLALTFAIALPMWLSFMMFGW 119
Cdd:PRK13417  162 FTLFFFILFCNLMGLVPSVgeltvvasdygglvalgvmdhtphalptfakvwsgITVTGDISVTMTLALLTMFLIYGAGF 241

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206 120 INHTKHMFAHLVPQGTPPALMSFMVLIETI-SNIIRPGTLAVRLAANMIAGHLLLT-LLGNTGPSMTMNLISLLIIGQMM 197
Cdd:PRK13417  242 SYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILaLMGFIFQFQSWGIVPVSVIGSGL 321

                         170       180
                  ....*....|....*....|...
gi 1496231206 198 LLMLESAVAMIQAYVFSILSTLY 220
Cdd:PRK13417  322 IYVLEIFVAFLQAYIFVLLTSLF 344
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 76-220 2.49e-06

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 46.66  E-value: 2.49e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  76 SIFIMMLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFG-----WINHTKHmfaHLVPQgtpPALMSFMVlietIS 150
Cdd:PRK13420   80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGiraegLREYLKH---YLSPS---PFLLPFHL----IS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1496231206 151 NIIRPGTLAVRLAANMIaghllltllgntgpSMTMNLISLLIIGQMM----LLMLESAVAMIQAYVFSILSTLY 220
Cdd:PRK13420  150 EITRTLALAVRLFGNIM--------------SLELAALLVLLVAGFLvpvpILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 67-169 7.90e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 41.79  E-value: 7.90e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  67 FNGTTFIFISIFIMMLFNNFMGL-FPYIFTSTSHLALTFAIALPMWLSFMMFGWINHTKHMFAHLVPQGTPPALMSFMVL 145
Cdd:MTH00050   18 LGGSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCI 97

                          90       100
                  ....*....|....*....|....
gi 1496231206 146 IETISNIIRPGTLAVRLAANMIAG 169
Cdd:MTH00050   98 AETISYIIRPVVLILRPFINISLG 121
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 65-220 3.55e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 37.37  E-value: 3.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231206  65 KSFNGTTFIFIsifimmLFNNFMGLFPYIFTSTSHLALTFAIALPMWLSFMMFGWinHTKHMFAHLVPQGTPPALMSFMV 144
Cdd:PRK13421   78 RALIGTLFLFV------LVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGV--RARGVRGYLATFAEPTWVMIPLN 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1496231206 145 LIETISniiRPGTLAVRLAANMIAGHLLLtllgntgpSMTMNLISLLI-IGQMMLLMLESAVamiQAYVFSILSTLY 220
Cdd:PRK13421  150 LVEQLT---RTFSLIVRLFGNVMSGVFVI--------GIVLSLAGLLVpIPLMALDLLTGAV---QAYIFAVLAMVF 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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