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Conserved domains on  [gi|1498435250|gb|AYO88136|]
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MC160 [Molluscum contagiosum virus subtype 2]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DED smart00031
Death effector domain;
92-167 7.04e-17

Death effector domain;


:

Pssm-ID: 214477  Cd Length: 79  Bit Score: 74.63  E-value: 7.04e-17
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1498435250   92 SQYRLQVASINNMLGGEELRVMRLCAGKLLPPNCT-PRCLVELVSALEDAGAVSPQDVSVLVTLLHAVCRYDLSVAL 167
Cdd:smart00031   1 SPYRVLLLLISEELDSEELEVLLFLCKDLIPKRKLeIKTFLDLFSALEEQGLLSEDNLSLLAELLYRLRRLDLLRRL 77
DD super family cl14633
Death Domain Superfamily of protein-protein interaction domains; The Death Domain (DD) ...
6-80 3.03e-09

Death Domain Superfamily of protein-protein interaction domains; The Death Domain (DD) superfamily includes the DD, Pyrin, CARD (Caspase activation and recruitment domain) and DED (Death Effector Domain) families. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes. They are prominent components of the programmed cell death (apoptosis) pathway and are found in a number of other signaling pathways including those that impact innate immunity, inflammation, differentiation, and cancer.


The actual alignment was detected with superfamily member cd08337:

Pssm-ID: 472698  Cd Length: 80  Bit Score: 53.19  E-value: 3.03e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1498435250   6 IPFSFLRNLLAELDASEHEVLRFLCRDVAPASKTAE--DALRALQRRRLLTLSSMAEFLCALRRFDMLKVRFGMSRE 80
Cdd:cd08337     1 VSAEVLHQVEEELDTDEDEMLLFLCRDAAPDCTTAQlrDALCALNERGKLTLAGLAELLYRVKRFDLLKRILHLSKE 77
 
Name Accession Description Interval E-value
DED smart00031
Death effector domain;
92-167 7.04e-17

Death effector domain;


Pssm-ID: 214477  Cd Length: 79  Bit Score: 74.63  E-value: 7.04e-17
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1498435250   92 SQYRLQVASINNMLGGEELRVMRLCAGKLLPPNCT-PRCLVELVSALEDAGAVSPQDVSVLVTLLHAVCRYDLSVAL 167
Cdd:smart00031   1 SPYRVLLLLISEELDSEELEVLLFLCKDLIPKRKLeIKTFLDLFSALEEQGLLSEDNLSLLAELLYRLRRLDLLRRL 77
DED_c-FLIP_r1 cd08337
Death Effector Domain, repeat 1, of cellular FLICE-Inhibitory Protein; Death Effector Domain ...
6-80 3.03e-09

Death Effector Domain, repeat 1, of cellular FLICE-Inhibitory Protein; Death Effector Domain (DED), repeat 1, similar to that found in FLICE-inhibitory protein (c-FLIP/CASH, also known as Casper/iFLICE/FLAME-1/CLARP/MRIT/usurpin). c-FLIP is a catalytically inactive homolog of the initator procaspases-8 and -10. It negatively influences apoptotic signaling by interfering with the efficient formation of the Death Inducing Signalling Complex (DISC). At low levels, c-FLIP has been shown to enhance apoptotic signaling by allosterically activating caspase-8. As a modulator of the initiator caspases, c-FLIP regulates life and death in various types of cells and tissues. All members contain two N-terminal DEDs and a C-terminal pseudo-caspase domain. DEDs comprise a subfamily of the Death Domain (DD) superfamily. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and CARD (Caspase activation and recruitment domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260044  Cd Length: 80  Bit Score: 53.19  E-value: 3.03e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1498435250   6 IPFSFLRNLLAELDASEHEVLRFLCRDVAPASKTAE--DALRALQRRRLLTLSSMAEFLCALRRFDMLKVRFGMSRE 80
Cdd:cd08337     1 VSAEVLHQVEEELDTDEDEMLLFLCRDAAPDCTTAQlrDALCALNERGKLTLAGLAELLYRVKRFDLLKRILHLSKE 77
DED smart00031
Death effector domain;
7-76 4.51e-08

Death effector domain;


Pssm-ID: 214477  Cd Length: 79  Bit Score: 49.97  E-value: 4.51e-08
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1498435250    7 PFSFLRNLLAE-LDASEHEVLRFLCRDVAP----ASKTAEDALRA---LQRRRLLTLSSMAEFLCALRRFDMLKVRFG 76
Cdd:smart00031   2 PYRVLLLLISEeLDSEELEVLLFLCKDLIPkrklEIKTFLDLFSAleeQGLLSEDNLSLLAELLYRLRRLDLLRRLFG 79
DED_c-FLIP_r2 cd08340
Death Effector Domain, repeat 2, of cellular FLICE-Inhibitory Protein; Death Effector Domain ...
92-163 6.26e-05

Death Effector Domain, repeat 2, of cellular FLICE-Inhibitory Protein; Death Effector Domain (DED), repeat 2, similar to that found in cellular FLICE-inhibitory protein (c-FLIP/CASH, also known as Casper/iFLICE/FLAME-1/CLARP/MRIT/usurpin). c-FLIP is a catalytically inactive homolog of the initator procaspases-8 and -10. It negatively influences apoptotic signaling by interfering with the efficient formation of the Death Inducing Signalling Complex (DISC). At low levels, c-FLIP has been shown to enhance apoptotic signaling by allosterically activating caspase-8. As a modulator of the initiator caspases, c-FLIP regulates life and death in various types of cells and tissues. All members contain two N-terminal DEDs and a C-terminal pseudo-caspase domain. DEDs comprise a subfamily of the Death Domain (DD) superfamily. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and CARD (Caspase activation and recruitment domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260046  Cd Length: 81  Bit Score: 41.18  E-value: 6.26e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1498435250  92 SQYRLQVASINNMLGGEELRVMRLCAGKLLP--PNCTPRCLVELVSALEDAGAVSPQDVSVLVTLLHAVCRYDL 163
Cdd:cd08340     1 SDYRVLMVCVSEELDKSDLRSLIFLLKDLNPsgSTAKSKSFLDLVVELEKLNLVSPSSVDLLEDCLRNIRRIDL 74
 
Name Accession Description Interval E-value
DED smart00031
Death effector domain;
92-167 7.04e-17

Death effector domain;


Pssm-ID: 214477  Cd Length: 79  Bit Score: 74.63  E-value: 7.04e-17
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1498435250   92 SQYRLQVASINNMLGGEELRVMRLCAGKLLPPNCT-PRCLVELVSALEDAGAVSPQDVSVLVTLLHAVCRYDLSVAL 167
Cdd:smart00031   1 SPYRVLLLLISEELDSEELEVLLFLCKDLIPKRKLeIKTFLDLFSALEEQGLLSEDNLSLLAELLYRLRRLDLLRRL 77
DED_c-FLIP_r1 cd08337
Death Effector Domain, repeat 1, of cellular FLICE-Inhibitory Protein; Death Effector Domain ...
6-80 3.03e-09

Death Effector Domain, repeat 1, of cellular FLICE-Inhibitory Protein; Death Effector Domain (DED), repeat 1, similar to that found in FLICE-inhibitory protein (c-FLIP/CASH, also known as Casper/iFLICE/FLAME-1/CLARP/MRIT/usurpin). c-FLIP is a catalytically inactive homolog of the initator procaspases-8 and -10. It negatively influences apoptotic signaling by interfering with the efficient formation of the Death Inducing Signalling Complex (DISC). At low levels, c-FLIP has been shown to enhance apoptotic signaling by allosterically activating caspase-8. As a modulator of the initiator caspases, c-FLIP regulates life and death in various types of cells and tissues. All members contain two N-terminal DEDs and a C-terminal pseudo-caspase domain. DEDs comprise a subfamily of the Death Domain (DD) superfamily. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and CARD (Caspase activation and recruitment domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260044  Cd Length: 80  Bit Score: 53.19  E-value: 3.03e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1498435250   6 IPFSFLRNLLAELDASEHEVLRFLCRDVAPASKTAE--DALRALQRRRLLTLSSMAEFLCALRRFDMLKVRFGMSRE 80
Cdd:cd08337     1 VSAEVLHQVEEELDTDEDEMLLFLCRDAAPDCTTAQlrDALCALNERGKLTLAGLAELLYRVKRFDLLKRILHLSKE 77
DED smart00031
Death effector domain;
7-76 4.51e-08

Death effector domain;


Pssm-ID: 214477  Cd Length: 79  Bit Score: 49.97  E-value: 4.51e-08
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1498435250    7 PFSFLRNLLAE-LDASEHEVLRFLCRDVAP----ASKTAEDALRA---LQRRRLLTLSSMAEFLCALRRFDMLKVRFG 76
Cdd:smart00031   2 PYRVLLLLISEeLDSEELEVLLFLCKDLIPkrklEIKTFLDLFSAleeQGLLSEDNLSLLAELLYRLRRLDLLRRLFG 79
DED_c-FLIP_r2 cd08340
Death Effector Domain, repeat 2, of cellular FLICE-Inhibitory Protein; Death Effector Domain ...
92-163 6.26e-05

Death Effector Domain, repeat 2, of cellular FLICE-Inhibitory Protein; Death Effector Domain (DED), repeat 2, similar to that found in cellular FLICE-inhibitory protein (c-FLIP/CASH, also known as Casper/iFLICE/FLAME-1/CLARP/MRIT/usurpin). c-FLIP is a catalytically inactive homolog of the initator procaspases-8 and -10. It negatively influences apoptotic signaling by interfering with the efficient formation of the Death Inducing Signalling Complex (DISC). At low levels, c-FLIP has been shown to enhance apoptotic signaling by allosterically activating caspase-8. As a modulator of the initiator caspases, c-FLIP regulates life and death in various types of cells and tissues. All members contain two N-terminal DEDs and a C-terminal pseudo-caspase domain. DEDs comprise a subfamily of the Death Domain (DD) superfamily. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and CARD (Caspase activation and recruitment domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260046  Cd Length: 81  Bit Score: 41.18  E-value: 6.26e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1498435250  92 SQYRLQVASINNMLGGEELRVMRLCAGKLLP--PNCTPRCLVELVSALEDAGAVSPQDVSVLVTLLHAVCRYDL 163
Cdd:cd08340     1 SDYRVLMVCVSEELDKSDLRSLIFLLKDLNPsgSTAKSKSFLDLVVELEKLNLVSPSSVDLLEDCLRNIRRIDL 74
DED_Caspase-like_r1 cd08776
Death effector domain, repeat 1, of initator caspase-like proteins; Death Effector Domain (DED) ...
10-75 6.03e-04

Death effector domain, repeat 1, of initator caspase-like proteins; Death Effector Domain (DED), first repeat, found in initator caspase-like proteins, like caspase-8 and -10 and c-FLIP. Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. Initiator caspases are the first to be activated following death- or inflammation-inducing signals. Caspase-8 and -10 are the initiators of death receptor mediated apoptosis. Together with FADD and the pseudo-caspase c-FLIP, they form the death-inducing signaling complex (DISC), whose formation is triggered by the activation of type 1 tumor necrosis factor (TNF) receptors such as Fas, TNF receptor 1, and TRAIL receptor. Caspase-8 and -10 also play important functions in cell adhesion and motility. c-FLIP is a catalytically inactive homolog of the initator procaspases-8 and -10. It negatively influences apoptotic signaling by interfering with the efficient formation of DISC. All members contain two N-terminal DED domains and a C-terminal caspase domain. DEDs comprise a subfamily of the Death Domain (DD) superfamily. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and CARD (Caspase activation and recruitment domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 176754  Cd Length: 71  Bit Score: 37.89  E-value: 6.03e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1498435250  10 FLRNLLAELDASEHEVLRFLCRDVAPASKTAEDALRALQRRR--LLTLSSMAEFLCALRRFDMLKVRF 75
Cdd:cd08776     4 VLCEVAEKLGTDEREVLLFLLNVFIPQPTLAQLIGALRALKEegRLTLPLLAECLYRAGRRDLLRSLL 71
DED_Caspase-like_r2 cd08775
Death effector domain, repeat 2, of initator caspase-like proteins; Death Effector Domain (DED) ...
92-163 2.42e-03

Death effector domain, repeat 2, of initator caspase-like proteins; Death Effector Domain (DED), second repeat, found in initator caspase-like proteins like caspase-8, -10 and c-FLIP. Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. Initiator caspases are the first to be activated following death- or inflammation-inducing signals. Caspase-8 and -10 are the initiators of death receptor mediated apoptosis. Together with FADD and the pseudo-caspase c-FLIP, they form the death-inducing signaling complex (DISC), whose formation is triggered by the activation of type 1 tumor necrosis factor (TNF) receptors such as Fas, TNF receptor 1, and TRAIL receptor. Caspase-8 and -10 also play important functions in cell adhesion and motility. c-FLIP is a catalytically inactive homolog of the initator procaspases-8 and -10. It negatively influences apoptotic signaling by interfering with the efficient formation of DISC. All members contain two N-terminal DED domains and a C-terminal caspase domain. DEDs comprise a subfamily of the Death Domain (DD) superfamily. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and CARD (Caspase activation and recruitment domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 176753  Cd Length: 81  Bit Score: 36.76  E-value: 2.42e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1498435250  92 SQYRLQVASINNMLGGEELRVMRLCAGKLLPPNCTPR--CLVELVSALEDAGAVSPQDVSVLVTLLHAVCRYDL 163
Cdd:cd08775     1 SAYRVMLYQVSEELSRSELRSLKFLLQEEISSCKLDDdmNFLDIVIEMENRVLLGPGKVDILKRMLRQLRRKDL 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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