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Conserved domains on  [gi|1509167431|gb|AYQ22818|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Coscineuta sp. OR249]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 2.65e-38

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.50  E-value: 2.65e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   3 ILSISTFMSFIVPMIVMILATIISKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1509167431  83 TSNILIWTTSTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 2.65e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.50  E-value: 2.65e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   3 ILSISTFMSFIVPMIVMILATIISKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1509167431  83 TSNILIWTTSTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 9.47e-21

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 79.39  E-value: 9.47e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431  19 MILATIISKKIINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIKtSNILIWTTSTMFFIM 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1509167431  99 VLLGGLYYEWYQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-115 5.33e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 73.23  E-value: 5.33e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431  11 SFIVPMIVMILATIISKKIiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIKTSNILIWt 90
Cdd:COG0838    15 ALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGL- 92

                          90       100
                  ....*....|....*....|....*
gi 1509167431  91 TSTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:COG0838    93 IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 2.65e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.50  E-value: 2.65e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   3 ILSISTFMSFIVPMIVMILATIISKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1509167431  83 TSNILIWTTSTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 1.08e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 120.73  E-value: 1.08e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   1 MLILSISTFMSFIVPMIVMILATIISKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1509167431  81 IKTSNILIWTTSTMFFIMVLLGGLYYEWYQGALQWAE 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-117 5.20e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 108.93  E-value: 5.20e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   1 MLILSISTFMSFIVPMIVMILATIISKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1509167431  81 IKTSNILIWTTSTMFFIMVLLGGLYYEWYQGALQWAE 117
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 1.32e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 100.32  E-value: 1.32e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   1 MLILSISTFMSFIVPMIVMILATIISKKIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1509167431  81 IKTSNILIWTTSTMFFIMVLLGGLYYEWYQGALQWA 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-117 1.78e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 92.31  E-value: 1.78e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   1 MLILSISTFMSFIVPMIVMILATIISKKiindrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00106    4 MLTLLTNTLLASLLVLIAFWLPQLNIYS-----EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1509167431  81 IKTSNILIWTTSTMFFIMVLLGGLYYEWYQGALQWAE 117
Cdd:MTH00106   79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-117 1.31e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 89.98  E-value: 1.31e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   1 MLILSISTFMSFIVPMIVMILATIISkkiinDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00136    5 TTILTITIALSLILAIVSFWLPQMTP-----DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1509167431  81 IKTSNIL---IWTTStmffIMVLLG-GLYYEWYQGALQWAE 117
Cdd:MTH00136   80 DQLPSPLltfFWATA----VLILLTlGLIYEWLQGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-116 1.67e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 89.55  E-value: 1.67e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   1 MLILSIsTFMSFIVPMIVMILATIISKkIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00113    1 MNLISM-LTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 78

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1509167431  81 IKTSNILIWTTSTMFFIMVLLGGLYYEWYQGALQWA 116
Cdd:MTH00113   79 INLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-117 3.03e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 88.90  E-value: 3.03e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   1 MLILSISTFMSFIVPMIVMILATIISkkiinDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPI--- 77
Cdd:MTH00069    3 MLMLLISTILSLILITISFWLPLNNP-----DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwa 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1509167431  78 IIIIKTSNILIWTTstmfFIMVLLG-GLYYEWYQGALQWAE 117
Cdd:MTH00069   78 SQLNTPTNTLFWST----LILILLTlGLIYEWIQGGLEWAE 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 10-117 3.10e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 86.57  E-value: 3.10e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431  10 MSFIVPMIVMILATIISKKII-------NDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIK 82
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGhflpsrsPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1509167431  83 TSNILIWTTSTMFFIMVLLGGLYYEWYQGALQWAE 117
Cdd:MTH00042   82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 9.47e-21

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 79.39  E-value: 9.47e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431  19 MILATIISKKIINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIKtSNILIWTTSTMFFIM 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1509167431  99 VLLGGLYYEWYQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 8-115 1.06e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 79.94  E-value: 1.06e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   8 TFMSFIVPMIVMILATIISK--KIINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIKTSN 85
Cdd:MTH00203    5 MLFFLIALLLSLILLFIAFWlpKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS 84

                          90       100       110
                  ....*....|....*....|....*....|
gi 1509167431  86 ilIWTTSTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:MTH00203   85 --LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 9-116 4.21e-18

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 73.36  E-value: 4.21e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   9 FMSFIVPMIVMILATIISKKII----NDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIKTS 84
Cdd:PRK06602   11 FLIFLIVAIGLGILLLVAGKLLgpraPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREI 90

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1509167431  85 NiLIWTTSTMFFIMVLLGGLYYEWYQGALQWA 116
Cdd:PRK06602   91 G-WLGFVEAMIFILVLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-115 5.33e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 73.23  E-value: 5.33e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431  11 SFIVPMIVMILATIISKKIiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIKTSNILIWt 90
Cdd:COG0838    15 ALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGL- 92

                          90       100
                  ....*....|....*....|....*
gi 1509167431  91 TSTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:COG0838    93 IEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 9-115 4.00e-15

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 65.85  E-value: 4.00e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   9 FMSFIVPMIVMILATIISKKIiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIKTSNILI 88
Cdd:MTH00018    8 IFSVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFG 86

                          90       100
                  ....*....|....*....|....*..
gi 1509167431  89 WTTsTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:MTH00018   87 FWT-MVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 4-115 3.93e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 63.19  E-value: 3.93e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   4 LSISTFMSFIVPMIVMILATIISKKI------INDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPI 77
Cdd:MTH00055    1 MSMEFLGIFILLLFSIGLSTVISGASyivgvkQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPW 80

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1509167431  78 IIIIKTSNIL-IWTtsTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:MTH00055   81 CVVYNQIGLFgFWV--MYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 5.04e-12

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 58.02  E-value: 5.04e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIKTSNIL-IWTTSTmfFIMVLLGGLYYEWYQ 110
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIK 117


                  ....*
gi 1509167431 111 GALQW 115
Cdd:MTH00030  118 GGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-115 8.44e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 46.90  E-value: 8.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   7 STFMSFIVPMIVMILATIISKKIINDR---EKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIIKT 83
Cdd:CHL00022    9 IFWAFLIISSLIPILAFLISGLLAPISkgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDV 88

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1509167431  84 SNILIWTtSTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:CHL00022   89 LGVSAFI-EALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
2-115 1.70e-06

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 43.58  E-value: 1.70e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   2 LILSISTFMSFIVPMIVMILATIISKKIINDrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIII 81
Cdd:PRK07756   10 MIVLIFLLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAY 88

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1509167431  82 KTSNiLIWTTSTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:PRK07756   89 DKLG-LFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 2.31e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 42.96  E-value: 2.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   1 MLILSISTFMSFIVPMIVMILATIISKKIiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1509167431  81 IKTSNILIWttstmFFIMVLLGGLYYEWYQGALQW 115
Cdd:MTH00092   80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
3-115 3.38e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 40.04  E-value: 3.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431   3 ILSISTFMSFIvpmIVMILATIISKKIIN---DREKSSPFECGFDP-KSSARMpfSLRFFLIAVIFLIFDVEIALILPII 78
Cdd:PRK08489   15 VLLVLTFVAFF---LTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWA 89

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1509167431  79 IIIKtsnILIW--TTSTMFFIMVLLGGLYYEWYQGALQW 115
Cdd:PRK08489   90 VDFK---LLGLfgLIEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 4.09e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 36.96  E-value: 4.09e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167431  19 MILATIISKKIINdREKSSPFECGFDPKSSARMP--FSLRFFLIAVIFLIFDVEIALILPIIIIIKTSNILIWTTSTMFF 96
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFM 100

                          90
                  ....*....|....*....
gi 1509167431  97 IMVLLGGLYyEWYQGALQW 115
Cdd:PRK07928  101 LTVFVAYAY-VWRRGGLEW 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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