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Conserved domains on  [gi|1509167436|gb|AYQ22823|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Coscineuta sp. OR249]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-310 1.07e-146

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 414.55  E-value: 1.07e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00193   82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLT 245
Cdd:MTH00193  162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1509167436 246 LIFLGGDFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00193  242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-310 1.07e-146

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 414.55  E-value: 1.07e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00193   82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLT 245
Cdd:MTH00193  162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1509167436 246 LIFLGGDFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00193  242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 2.14e-95

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 284.37  E-value: 2.14e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  13 FLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNLMISLFIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  93 VIFPYLTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMFD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 171 FMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1509167436 251 G------DFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 6-311 7.37e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 268.54  E-value: 7.37e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:COG1005     9 LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:COG1005    89 IPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 164 GSFNMFDFMIYQI-YCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:COG1005   169 GSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSA 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 243 FLTLIFLGG--------DFYS----FMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFFIFFVGLKILL 310
Cdd:COG1005   249 LATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVVLL 327


                  .
gi 1509167436 311 I 311
Cdd:COG1005   328 F 328
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
15-310 5.60e-44

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 153.32  E-value: 5.60e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  15 LMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNLMISLFIWVI 94
Cdd:NF040610   19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  95 FP----------YLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:NF040610   99 IPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 165 SFNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFL 244
Cdd:NF040610  179 SLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLV 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 245 TLIFLGG-------------DFYSFM--FFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKIL 309
Cdd:NF040610  259 VLLFLGGwnlpgfvtdipvlGIILPTlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLY 338


                  .
gi 1509167436 310 L 310
Cdd:NF040610  339 L 339
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-310 1.07e-146

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 414.55  E-value: 1.07e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00193   82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLT 245
Cdd:MTH00193  162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1509167436 246 LIFLGGDFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00193  242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-308 1.07e-126

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 363.97  E-value: 1.07e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLT 245
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1509167436 246 LIFLGGDFY--SFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKI 308
Cdd:MTH00225  241 ILFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-306 1.39e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 343.39  E-value: 1.39e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLT 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1509167436 246 LIFLGGDF-----YSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00143  241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-313 7.52e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 306.55  E-value: 7.52e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   7 MFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  87 ISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 167 NMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLTL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1509167436 247 IFLGG-------DFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILLISF 313
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-312 1.09e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 306.16  E-value: 1.09e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   5 CLMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFN 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  85 LMISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 165 SFNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFL 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1509167436 245 TLIFLGGDFYSFM-------FFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILLIS 312
Cdd:MTH00071  244 TILFLGSTYNHLQpelstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 6-308 3.98e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 302.20  E-value: 3.98e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00111    5 LLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILAL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00111   85 LLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLT 245
Cdd:MTH00111  165 YTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTT 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 246 LIFL-------GGDFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKI 308
Cdd:MTH00111  245 ILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-306 7.72e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 301.06  E-value: 7.72e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00218    2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00218   82 TLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGG 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLT 245
Cdd:MTH00218  162 FSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1509167436 246 LIFLGGDFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00218  242 ILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-310 1.22e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 300.51  E-value: 1.22e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLT 245
Cdd:MTH00195  162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1509167436 246 LIFLGGDfYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00195  242 ILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 6-310 3.01e-97

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 289.95  E-value: 3.01e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00040    4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00040   84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLT 245
Cdd:MTH00040  164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1509167436 246 LIFLGGDFYSFMFF--------IKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00040  244 ILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-310 2.46e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 287.66  E-value: 2.46e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   1 MLYDCLMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  81 PVFNLMISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 161 ILIGSFNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1509167436 241 SMFLTLIFLGGDFYSFM-------FFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00134  241 NTLSAILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
NADHdh pfam00146
NADH dehydrogenase;
13-302 2.14e-95

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 284.37  E-value: 2.14e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  13 FLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNLMISLFIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  93 VIFPYLTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMFD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 171 FMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1509167436 251 G------DFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-311 5.82e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 280.90  E-value: 5.82e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   8 FILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNLMI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  88 SLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFN 167
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 168 mFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLTLI 247
Cdd:MTH00010  165 -FSKIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1509167436 248 FLGGDFYSF----MFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILLI 311
Cdd:MTH00010  244 FTSFIPSIFisdlMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 6-311 7.37e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 268.54  E-value: 7.37e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:COG1005     9 LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:COG1005    89 IPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 164 GSFNMFDFMIYQI-YCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:COG1005   169 GSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSA 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 243 FLTLIFLGG--------DFYS----FMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFFIFFVGLKILL 310
Cdd:COG1005   249 LATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVVLL 327


                  .
gi 1509167436 311 I 311
Cdd:COG1005   328 F 328
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-308 4.09e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 256.19  E-value: 4.09e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLT--YMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:MTH00054   82 TLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 164 GSFNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMF 243
Cdd:MTH00054  162 GSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTF 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1509167436 244 LTLIFLGGDFYSF----------MFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKI 308
Cdd:MTH00054  242 GVILFLGGWLVISgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-297 7.75e-84

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 255.50  E-value: 7.75e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:PRK06076   10 LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAF 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTY--MCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:PRK06076   90 IPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLA 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 164 GSFNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMF 243
Cdd:PRK06076  170 GSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSAL 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1509167436 244 LTLIFLGG----------DFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076  250 ITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 1.39e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 250.04  E-value: 1.39e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   1 MLYDCLMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  81 PVFNLMISLFIWVIFPYL--TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 159 LIILIGSFNMFDFMIYQI-YCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1509167436 238 VFMSMFLTLIFLGG--------DFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-308 2.56e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 219.12  E-value: 2.56e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   2 LYDCLMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSP 81
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  82 VFNLMISLFIWVI--FPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:MTH00029   83 IISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 160 IILIGSFNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVF 239
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 240 MSMFLTLIFLGG-----------------------DFYSFMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLS 296
Cdd:MTH00029  243 MSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                         330
                  ....*....|..
gi 1509167436 297 LNFFIFFVGLKI 308
Cdd:MTH00029  323 LGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-308 4.57e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 195.89  E-value: 4.57e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  11 NFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNLMISLF 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  91 IWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMFD 170
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 171 FmiyqiycwFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFLTLIFLG 250
Cdd:MTH00090  161 S--------FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1509167436 251 gdfysFMFFIKLVIMSfIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKI 308
Cdd:MTH00090  233 -----FSFLMLFLIFS-LLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-304 1.53e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 163.94  E-value: 1.53e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLIsVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNL 85
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 166 FNMFDFMIYqiyCWFIIISFPLFLSCFASC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFL 244
Cdd:MTH00058  161 YSLVDFYYS---GWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 245 TLIFLGGDFYSFMFFIKLvimsFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFV 304
Cdd:MTH00058  238 SVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
15-310 5.60e-44

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 153.32  E-value: 5.60e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  15 LMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSPVFNLMISLFIWVI 94
Cdd:NF040610   19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  95 FP----------YLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:NF040610   99 IPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 165 SFNMFDFMIYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMFL 244
Cdd:NF040610  179 SLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLV 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 245 TLIFLGG-------------DFYSFM--FFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKIL 309
Cdd:NF040610  259 VLLFLGGwnlpgfvtdipvlGIILPTlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLY 338


                  .
gi 1509167436 310 L 310
Cdd:NF040610  339 L 339
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-297 6.52e-34

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 127.37  E-value: 6.52e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   2 LYDCLMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLVCKEQPIPLMSNYLLYYFSP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  82 VFnLMISLFI--WVI-FPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:CHL00032  103 SI-AVISILLsyLVIpFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 159 LIILIGSFNMFDFM----IYQIYCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEY 234
Cdd:CHL00032  182 ISLLSNSLSTVDIVeaqsKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASY 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 235 TSIVFMSMFLTLIFLGG-----------DFYS--------------FMFFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAW 289
Cdd:CHL00032  262 LNLLVSSLFVTVLYLGGwnlsipyifipELFEinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQLLNLGW 341


                  ....*...
gi 1509167436 290 KSFLPLSL 297
Cdd:CHL00032  342 KFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 1.04e-23

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 98.33  E-value: 1.04e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436   6 LMFILNFFLLMICVLISVAFLTLLERKVLGYIQIRKGPnkvgflGIPQPFSDAIKLVCKEQPIPLMSNyLLYYFSPVFNL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436  86 MISLFIWVIFPYLTYMCSFSYG--FLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 164 GSFNMFDFMIYQI---YCWFIIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG0650   154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167436 241 SMFLTLIFLGGDFYSFM------FFIKLVIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFV 304
Cdd:COG0650   234 LSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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