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Conserved domains on  [gi|139003837|dbj|BAF52373|]
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tir-cytoskeleton coupling protein [Escherichia coli O26:H11]

Protein Classification

EspF domain-containing protein( domain architecture ID 10521594)

EspF domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
EspF pfam04806
EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host ...
 197-243 2.21e-20

EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.


:

Pssm-ID: 398464 [Multi-domain]  Cd Length: 47  Bit Score: 81.34  E-value: 2.21e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 139003837  197 IQPARNMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLMQHLAEHG 243
Cdd:pfam04806   1 IQPARSMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 47
EspF pfam04806
EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host ...
 150-196 3.16e-20

EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.


:

Pssm-ID: 398464 [Multi-domain]  Cd Length: 47  Bit Score: 80.96  E-value: 3.16e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 139003837  150 IQPARNMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 196
Cdd:pfam04806   1 IQPARSMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 47
EspF pfam04806
EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host ...
 103-149 1.25e-10

EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.


:

Pssm-ID: 398464 [Multi-domain]  Cd Length: 47  Bit Score: 55.53  E-value: 1.25e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 139003837  103 IQPARNMAEHIPPAPNWPAPPPPVQNEQSRPLPDVAQRLMQHLAEHG 149
Cdd:pfam04806   1 IQPARSMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 47
 
Name Accession Description Interval E-value
EspF pfam04806
EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host ...
 197-243 2.21e-20

EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.


Pssm-ID: 398464 [Multi-domain]  Cd Length: 47  Bit Score: 81.34  E-value: 2.21e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 139003837  197 IQPARNMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLMQHLAEHG 243
Cdd:pfam04806   1 IQPARSMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 47
EspF pfam04806
EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host ...
 150-196 3.16e-20

EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.


Pssm-ID: 398464 [Multi-domain]  Cd Length: 47  Bit Score: 80.96  E-value: 3.16e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 139003837  150 IQPARNMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 196
Cdd:pfam04806   1 IQPARSMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 47
EspF pfam04806
EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host ...
 103-149 1.25e-10

EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.


Pssm-ID: 398464 [Multi-domain]  Cd Length: 47  Bit Score: 55.53  E-value: 1.25e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 139003837  103 IQPARNMAEHIPPAPNWPAPPPPVQNEQSRPLPDVAQRLMQHLAEHG 149
Cdd:pfam04806   1 IQPARSMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 47
 
Name Accession Description Interval E-value
EspF pfam04806
EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host ...
 197-243 2.21e-20

EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.


Pssm-ID: 398464 [Multi-domain]  Cd Length: 47  Bit Score: 81.34  E-value: 2.21e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 139003837  197 IQPARNMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLMQHLAEHG 243
Cdd:pfam04806   1 IQPARSMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 47
EspF pfam04806
EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host ...
 150-196 3.16e-20

EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.


Pssm-ID: 398464 [Multi-domain]  Cd Length: 47  Bit Score: 80.96  E-value: 3.16e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 139003837  150 IQPARNMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 196
Cdd:pfam04806   1 IQPARSMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 47
EspF pfam04806
EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host ...
 103-149 1.25e-10

EspF protein repeat; The enteropathogenic Escherichia coli EspF secreted protein induces host cell apoptosis. Its proline-rich structure suggests that it may act by binding to SH3 domains or EVH1 domains of host cell signalling proteins.


Pssm-ID: 398464 [Multi-domain]  Cd Length: 47  Bit Score: 55.53  E-value: 1.25e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 139003837  103 IQPARNMAEHIPPAPNWPAPPPPVQNEQSRPLPDVAQRLMQHLAEHG 149
Cdd:pfam04806   1 IQPARSMAEHIPPAPNWPAPTPPVQNEQSRPLPDVAQRLVQHLAEHG 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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