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Conserved domains on  [gi|215706295|dbj|BAG93151|]
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unnamed protein product [Oryza sativa Japonica Group]

Protein Classification

Kelch domain-containing protein( domain architecture ID 1002449)

Kelch domain-containing protein is a protein that contains one or more kelch domains which play a role in a variety of cellular processes, including cell signaling, transcription regulation, and protein degradation.

Gene Ontology:  GO:0016567|GO:0080028
PubMed:  31442578|24959344

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PLN02193 super family cl31837
nitrile-specifier protein
2-327 2.02e-117

nitrile-specifier protein


The actual alignment was detected with superfamily member PLN02193:

Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 347.33  E-value: 2.02e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295   2 PMAAGTWVKLEQKGDGPGARSSHAITLVGGTAYAFGGEFTPRVPVDNAMYAFDLKSQCWSALDASGDVPPPR-VGVTMAS 80
Cdd:PLN02193 147 PKLLGKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLScLGVRMVS 226
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  81 VGATVYMFGGRDQEhKELNELYSFDTATNRWTLLSSgAGDGPPHRSYHSMVADAAgggKVYVFGGCGDAGRLNDLWAYDV 160
Cdd:PLN02193 227 IGSTLYVFGGRDAS-RQYNGFYSFDTTTNEWKLLTP-VEEGPTPRSFHSMAADEE---NVYVFGGVSATARLKTLDSYNI 301
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 161 AAGRWEALPSPGEACKPRGGPGLAVAGGKVWVVYGFSGEELDDVHCYDPGTGAWSTVETTGGggggdKPSPRSVFCAAGI 240
Cdd:PLN02193 302 VDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGV-----RPSERSVFASAAV 376
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 241 GKHVVVFGGEVDPSDLGHLGAGKFSAEAFALDTETGAWARLDDAG--EHHPGPRGWCAFSAGEVDGRRGLLVYGGNSPTN 318
Cdd:PLN02193 377 GKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLDKFGeeEETPSSRGWTASTTGTIDGKKGLVMHGGKAPTN 456

                 ....*....
gi 215706295 319 DRLGDIYFF 327
Cdd:PLN02193 457 DRFDDLFFY 465
 
Name Accession Description Interval E-value
PLN02193 PLN02193
nitrile-specifier protein
2-327 2.02e-117

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 347.33  E-value: 2.02e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295   2 PMAAGTWVKLEQKGDGPGARSSHAITLVGGTAYAFGGEFTPRVPVDNAMYAFDLKSQCWSALDASGDVPPPR-VGVTMAS 80
Cdd:PLN02193 147 PKLLGKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLScLGVRMVS 226
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  81 VGATVYMFGGRDQEhKELNELYSFDTATNRWTLLSSgAGDGPPHRSYHSMVADAAgggKVYVFGGCGDAGRLNDLWAYDV 160
Cdd:PLN02193 227 IGSTLYVFGGRDAS-RQYNGFYSFDTTTNEWKLLTP-VEEGPTPRSFHSMAADEE---NVYVFGGVSATARLKTLDSYNI 301
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 161 AAGRWEALPSPGEACKPRGGPGLAVAGGKVWVVYGFSGEELDDVHCYDPGTGAWSTVETTGGggggdKPSPRSVFCAAGI 240
Cdd:PLN02193 302 VDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGV-----RPSERSVFASAAV 376
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 241 GKHVVVFGGEVDPSDLGHLGAGKFSAEAFALDTETGAWARLDDAG--EHHPGPRGWCAFSAGEVDGRRGLLVYGGNSPTN 318
Cdd:PLN02193 377 GKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLDKFGeeEETPSSRGWTASTTGTIDGKKGLVMHGGKAPTN 456

                 ....*....
gi 215706295 319 DRLGDIYFF 327
Cdd:PLN02193 457 DRFDDLFFY 465
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
6-313 1.78e-31

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 119.11  E-value: 1.78e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295   6 GTWvklEQKGDGPGARSSHAITLVGGTAYAFGGEFTPRVPvdNAMYAFDLKSQCWSALdasGDVP-PPRVGVTMASVGAT 84
Cdd:COG3055    1 ATW---SSLPDLPTPRSEAAAALLDGKVYVAGGLSGGSAS--NSFEVYDPATNTWSEL---APLPgPPRHHAAAVAQDGK 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  85 VYMFGGRDQEHKE---LNELYSFDTATNRWTLLssgaGDGPPHRSYHSMVADaagGGKVYVFGGCGDAGRLNDLWAYDVA 161
Cdd:COG3055   73 LYVFGGFTGANPSstpLNDVYVYDPATNTWTKL----APMPTPRGGATALLL---DGKIYVVGGWDDGGNVAWVEVYDPA 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 162 AGRWEALPSPGEackPRGGPGLAVA-GGKVWVVYGFSGeelddvhcyDPGTGAWSTVEttggggggDKPSPRSVFCAAGI 240
Cdd:COG3055  146 TGTWTQLAPLPT---PRDHLAAAVLpDGKILVIGGRNG---------SGFSNTWTTLA--------PLPTARAGHAAAVL 205
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 215706295 241 GKHVVVFGGEvdpsdlghlgaGKFSAEAFALDTETGAWARLDdagehhPGPRGWCAFSAGEVDGRrgLLVYGG 313
Cdd:COG3055  206 GGKILVFGGE-----------SGFSDEVEAYDPATNTWTALG------ELPTPRHGHAAVLTDGK--VYVIGG 259
Kelch_4 pfam13418
Galactose oxidase, central domain;
124-171 1.08e-08

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 50.69  E-value: 1.08e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 215706295  124 HRSYHSMVADaaGGGKVYVFGGCGDAG-RLNDLWAYDVAAGRWEALPSP 171
Cdd:pfam13418   1 PRAYHTSTSI--PDDTIYLFGGEGEDGtLLSDLWVFDLSTNEWTRLGSL 47
 
Name Accession Description Interval E-value
PLN02193 PLN02193
nitrile-specifier protein
2-327 2.02e-117

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 347.33  E-value: 2.02e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295   2 PMAAGTWVKLEQKGDGPGARSSHAITLVGGTAYAFGGEFTPRVPVDNAMYAFDLKSQCWSALDASGDVPPPR-VGVTMAS 80
Cdd:PLN02193 147 PKLLGKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLScLGVRMVS 226
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  81 VGATVYMFGGRDQEhKELNELYSFDTATNRWTLLSSgAGDGPPHRSYHSMVADAAgggKVYVFGGCGDAGRLNDLWAYDV 160
Cdd:PLN02193 227 IGSTLYVFGGRDAS-RQYNGFYSFDTTTNEWKLLTP-VEEGPTPRSFHSMAADEE---NVYVFGGVSATARLKTLDSYNI 301
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 161 AAGRWEALPSPGEACKPRGGPGLAVAGGKVWVVYGFSGEELDDVHCYDPGTGAWSTVETTGGggggdKPSPRSVFCAAGI 240
Cdd:PLN02193 302 VDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGV-----RPSERSVFASAAV 376
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 241 GKHVVVFGGEVDPSDLGHLGAGKFSAEAFALDTETGAWARLDDAG--EHHPGPRGWCAFSAGEVDGRRGLLVYGGNSPTN 318
Cdd:PLN02193 377 GKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLDKFGeeEETPSSRGWTASTTGTIDGKKGLVMHGGKAPTN 456

                 ....*....
gi 215706295 319 DRLGDIYFF 327
Cdd:PLN02193 457 DRFDDLFFY 465
PLN02153 PLN02153
epithiospecifier protein
2-327 1.98e-98

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 294.20  E-value: 1.98e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295   2 PMAAGTWVKLEQKG-DGPGARSSHAITLVGGTAYAFGGEFTPRVPVDNAMYAFDLKSQCWSALDASGDvpPPRV---GVT 77
Cdd:PLN02153   3 PTLQGGWIKVEQKGgKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGD--VPRIsclGVR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  78 MASVGATVYMFGGRDqEHKELNELYSFDTATNRWTLLSS-GAGDGPPHRSYHSMVADAaggGKVYVFGGCGDAG------ 150
Cdd:PLN02153  81 MVAVGTKLYIFGGRD-EKREFSDFYSYDTVKNEWTFLTKlDEEGGPEARTFHSMASDE---NHVYVFGGVSKGGlmktpe 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 151 RLNDLWAYDVAAGRWEALPSPGEACKPRGGPGLAVAGGKVWVVYGFSGE---------ELDDVHCYDPGTGAWSTVETTG 221
Cdd:PLN02153 157 RFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSilpggksdyESNAVQFFDPASGKWTEVETTG 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 222 GggggdKPSPRSVFCAAGIGKHVVVFGGEVDPSDLGHLGAGKFSAEAFALDTETGAWARLDDAGEhhPG-PRGWCAFSAG 300
Cdd:PLN02153 237 A-----KPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGECGE--PAmPRGWTAYTTA 309
                        330       340
                 ....*....|....*....|....*..
gi 215706295 301 EVDGRRGLLVYGGNSPTNDRLGDIYFF 327
Cdd:PLN02153 310 TVYGKNGLLMHGGKLPTNERTDDLYFY 336
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
6-313 1.78e-31

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 119.11  E-value: 1.78e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295   6 GTWvklEQKGDGPGARSSHAITLVGGTAYAFGGEFTPRVPvdNAMYAFDLKSQCWSALdasGDVP-PPRVGVTMASVGAT 84
Cdd:COG3055    1 ATW---SSLPDLPTPRSEAAAALLDGKVYVAGGLSGGSAS--NSFEVYDPATNTWSEL---APLPgPPRHHAAAVAQDGK 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  85 VYMFGGRDQEHKE---LNELYSFDTATNRWTLLssgaGDGPPHRSYHSMVADaagGGKVYVFGGCGDAGRLNDLWAYDVA 161
Cdd:COG3055   73 LYVFGGFTGANPSstpLNDVYVYDPATNTWTKL----APMPTPRGGATALLL---DGKIYVVGGWDDGGNVAWVEVYDPA 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 162 AGRWEALPSPGEackPRGGPGLAVA-GGKVWVVYGFSGeelddvhcyDPGTGAWSTVEttggggggDKPSPRSVFCAAGI 240
Cdd:COG3055  146 TGTWTQLAPLPT---PRDHLAAAVLpDGKILVIGGRNG---------SGFSNTWTTLA--------PLPTARAGHAAAVL 205
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 215706295 241 GKHVVVFGGEvdpsdlghlgaGKFSAEAFALDTETGAWARLDdagehhPGPRGWCAFSAGEVDGRrgLLVYGG 313
Cdd:COG3055  206 GGKILVFGGE-----------SGFSDEVEAYDPATNTWTALG------ELPTPRHGHAAVLTDGK--VYVIGG 259
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
134-318 2.71e-20

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 89.06  E-value: 2.71e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 134 AAGGGKVYVFGGCGDAGRLNDLWAYDVAAGRWEALPS-PGEackPRGGPGLAVAGGKVWVVYGFSGEE-----LDDVHCY 207
Cdd:COG3055   19 ALLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPlPGP---PRHHAAAVAQDGKLYVFGGFTGANpsstpLNDVYVY 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 208 DPGTGAWSTVETTggggggdkPSPRSVFCAAGIGKHVVVFGGEVDpsdlghlgaGKFSAEAFALDTETGAWARLDDAgeh 287
Cdd:COG3055   96 DPATNTWTKLAPM--------PTPRGGATALLLDGKIYVVGGWDD---------GGNVAWVEVYDPATGTWTQLAPL--- 155
                        170       180       190
                 ....*....|....*....|....*....|.
gi 215706295 288 hPGPRGWcaFSAGEVDGRRGLLVYGGNSPTN 318
Cdd:COG3055  156 -PTPRDH--LAAAVLPDGKILVIGGRNGSGF 183
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
4-193 4.93e-20

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 88.29  E-value: 4.93e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295   4 AAGTWVKLeqkGDGPGARSSHAITLV-GGTAYAFGG--EFTPRVPVDNAMYAFDLKSQCWSALdasGDVPPPRVGVTMAS 80
Cdd:COG3055   46 ATNTWSEL---APLPGPPRHHAAAVAqDGKLYVFGGftGANPSSTPLNDVYVYDPATNTWTKL---APMPTPRGGATALL 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  81 VGATVYMFGGRDQEHkELNELYSFDTATNRWTLLSS----------------------GAGD---------GPPHRSYHS 129
Cdd:COG3055  120 LDGKIYVVGGWDDGG-NVAWVEVYDPATGTWTQLAPlptprdhlaaavlpdgkilvigGRNGsgfsntwttLAPLPTARA 198
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 215706295 130 MVADAAGGGKVYVFGGcgDAGRLNDLWAYDVAAGRWEALPSPGEackPRGGPGLAVAGGKVWVV 193
Cdd:COG3055  199 GHAAAVLGGKILVFGG--ESGFSDEVEAYDPATNTWTALGELPT---PRHGHAAVLTDGKVYVI 257
PHA03098 PHA03098
kelch-like protein; Provisional
85-249 6.21e-10

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 60.17  E-value: 6.21e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  85 VYMFGGRDQEHKELNELYSFDTATNRWTLLssgagdgPPHRSYHSMVADAAGGGKVYVFGGCGDAGRLNDLWAYDVAAGR 164
Cdd:PHA03098 297 IYFIGGMNKNNLSVNSVVSYDTKTKSWNKV-------PELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESK 369
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 165 WEALPSPGEackPRGGPGLAVAGGKVWVVYGFS--GEELDDVHCYDPGTGAWSTVEttggggggdkPSPRSVF--CAAGI 240
Cdd:PHA03098 370 WREEPPLIF---PRYNPCVVNVNNLIYVIGGISknDELLKTVECFSLNTNKWSKGS----------PLPISHYggCAIYH 436

                 ....*....
gi 215706295 241 GKHVVVFGG 249
Cdd:PHA03098 437 DGKIYVIGG 445
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
4-160 9.39e-10

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 58.63  E-value: 9.39e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295   4 AAGTWVKLeqkGDGPGARSSH-AITLVGGTAYAFGGeftprvpvdnamYAFDLKSQCWSALDasgDVPPPRVGVTMASVG 82
Cdd:COG3055  145 ATGTWTQL---APLPTPRDHLaAAVLPDGKILVIGG------------RNGSGFSNTWTTLA---PLPTARAGHAAAVLG 206
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 215706295  83 ATVYMFGGrdqEHKELNELYSFDTATNRWTLLssgaGDGPPHRSYHSMVADaagGGKVYVFGGCGDAG-RLNDLWAYDV 160
Cdd:COG3055  207 GKILVFGG---ESGFSDEVEAYDPATNTWTAL----GELPTPRHGHAAVLT---DGKVYVIGGETKPGvRTPLVTSAEV 275
Kelch_4 pfam13418
Galactose oxidase, central domain;
124-171 1.08e-08

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 50.69  E-value: 1.08e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 215706295  124 HRSYHSMVADaaGGGKVYVFGGCGDAG-RLNDLWAYDVAAGRWEALPSP 171
Cdd:pfam13418   1 PRAYHTSTSI--PDDTIYLFGGEGEDGtLLSDLWVFDLSTNEWTRLGSL 47
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
124-172 6.80e-08

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 48.38  E-value: 6.80e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 215706295  124 HRSYHSMVADaagGGKVYVFGGCGDAGRLNDLWAYDVAAGRWEALPSPG 172
Cdd:pfam01344   1 RRSGAGVVVV---GGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSMP 46
PHA03098 PHA03098
kelch-like protein; Provisional
72-215 2.39e-07

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 52.08  E-value: 2.39e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  72 PRVGVTMASVGATVYMFGGRDQEHKELNELYSFDTATNRWTLLSsgagdgpPHRSYHSMVADAAGGGKVYVFGGCG---D 148
Cdd:PHA03098 379 PRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGS-------PLPISHYGGCAIYHDGKIYVIGGISyidN 451
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 215706295 149 AGRLNDLWAYDVAAGRWEALPSpgeACKPRGGPGLAVAGGKVWVVYGFSGEEL-DDVHCYDPGTGAWS 215
Cdd:PHA03098 452 IKVYNIVESYNPVTNKWTELSS---LNFPRINASLCIFNNKIYVVGGDKYEYYiNEIEVYDDKTNTWT 516
Kelch_3 pfam13415
Galactose oxidase, central domain;
82-133 4.59e-07

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 46.13  E-value: 4.59e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 215706295   82 GATVYMFGGRDQEH-KELNELYSFDTATNRWTLLssgaGDGPPHRSYHSMVAD 133
Cdd:pfam13415   1 GDKLYIFGGLGFDGqTRLNDLYVYDLDTNTWTQI----GDLPPPRSGHSATYI 49
Kelch_6 pfam13964
Kelch motif;
124-171 2.32e-06

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 43.86  E-value: 2.32e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 215706295  124 HRSYHSMVADaagGGKVYVFGG-CGDAGRLNDLWAYDVAAGRWEALPSP 171
Cdd:pfam13964   1 PRTFHSVVSV---GGYIYVFGGyTNASPALNKLEVYNPLTKSWEELPPL 46
Kelch_6 pfam13964
Kelch motif;
72-116 5.62e-06

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 43.09  E-value: 5.62e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 215706295   72 PRVGVTMASVGATVYMFGGRDQEHKELNELYSFDTATNRWTLLSS 116
Cdd:pfam13964   1 PRTFHSVVSVGGYIYVFGGYTNASPALNKLEVYNPLTKSWEELPP 45
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
177-217 8.79e-06

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 42.21  E-value: 8.79e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 215706295  177 PRGGPGLAVAGGKVWVVYGFSGEE-LDDVHCYDPGTGAWSTV 217
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQsLNSVEVYDPETNTWSKL 42
PRK14131 PRK14131
N-acetylneuraminate epimerase;
47-145 9.92e-06

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 46.93  E-value: 9.92e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  47 DNAMYAFDLKSQC--WSALdasGDVP-PPRVGVTMASVGATVYMFGGRDQEHKE-----LNELYSFDTATNRWTLLSSga 118
Cdd:PRK14131  49 GTSWYKLDLNAPSkgWTKI---AAFPgGPREQAVAAFIDGKLYVFGGIGKTNSEgspqvFDDVYKYDPKTNSWQKLDT-- 123
                         90       100
                 ....*....|....*....|....*..
gi 215706295 119 gdGPPhRSYHSMVADAAGGGKVYVFGG 145
Cdd:PRK14131 124 --RSP-VGLAGHVAVSLHNGKAYITGG 147
Kelch_4 pfam13418
Galactose oxidase, central domain;
72-116 1.45e-05

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 41.83  E-value: 1.45e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 215706295   72 PRVGVTMASVGA-TVYMFGGRDQEHKELNELYSFDTATNRWTLLSS 116
Cdd:pfam13418   1 PRAYHTSTSIPDdTIYLFGGEGEDGTLLSDLWVFDLSTNEWTRLGS 46
PRK14131 PRK14131
N-acetylneuraminate epimerase;
137-249 1.56e-05

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 46.16  E-value: 1.56e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295 137 GGKVYVfgGCGDAGrlNDLWAYDVAA--GRWEALPS-PGeacKPRGGPGLAVAGGKVWVvYGFSGEE--------LDDVH 205
Cdd:PRK14131  38 NNTVYV--GLGSAG--TSWYKLDLNApsKGWTKIAAfPG---GPREQAVAAFIDGKLYV-FGGIGKTnsegspqvFDDVY 109
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 215706295 206 CYDPGTGAWSTVETTggggggdkpSPRSVFCAAGI---GKHVVVFGG 249
Cdd:PRK14131 110 KYDPKTNSWQKLDTR---------SPVGLAGHVAVslhNGKAYITGG 147
Kelch_3 pfam13415
Galactose oxidase, central domain;
30-81 3.49e-05

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 40.74  E-value: 3.49e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 215706295   30 GGTAYAFGGEFTPRVPVDNAMYAFDLKSQCWSALdasGDVPPPRVGVTMASV 81
Cdd:pfam13415   1 GDKLYIFGGLGFDGQTRLNDLYVYDLDTNTWTQI---GDLPPPRSGHSATYI 49
Kelch_3 pfam13415
Galactose oxidase, central domain;
137-175 6.62e-05

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 39.97  E-value: 6.62e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 215706295  137 GGKVYVFGGCGDAG--RLNDLWAYDVAAGRWEALPSPGEAC 175
Cdd:pfam13415   1 GDKLYIFGGLGFDGqtRLNDLYVYDLDTNTWTQIGDLPPPR 41
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
72-116 5.74e-04

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 37.21  E-value: 5.74e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 215706295   72 PRVGVTMASVGATVYMFGGRDqEHKELNELYSFDTATNRWTLLSS 116
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFD-GNQSLNSVEVYDPETNTWSKLPS 44
Vgb COG4257
Streptogramin lyase [Defense mechanisms];
99-219 9.75e-04

Streptogramin lyase [Defense mechanisms];


Pssm-ID: 443399 [Multi-domain]  Cd Length: 270  Bit Score: 40.39  E-value: 9.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  99 NELYSFDTATNRWTLLSSGAGDGPphrsyHSMVADAAGggKVYvFGGCGDagrlNDLWAYDVAAGRWEALPSPGEACKPR 178
Cdd:COG4257   38 GRIGRLDPATGEFTEYPLGGGSGP-----HGIAVDPDG--NLW-FTDNGN----NRIGRIDPKTGEITTFALPGGGSNPH 105
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 215706295 179 ggpGLAVAG-GKVWvvygFSGEELDDVHCYDPGTGAWSTVET 219
Cdd:COG4257  106 ---GIAFDPdGNLW----FTDQGGNRIGRLDPATGEVTEFPL 140
PRK14131 PRK14131
N-acetylneuraminate epimerase;
68-197 4.49e-03

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 38.46  E-value: 4.49e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 215706295  68 DVPPPRVGVTMASVGATVYM-FGGRDqehkelNELYSFDTAT--NRWTLLSS---GAGDGPphrsyhsmvADAAGGGKVY 141
Cdd:PRK14131  24 DLPVPFKNGTGAIDNNTVYVgLGSAG------TSWYKLDLNApsKGWTKIAAfpgGPREQA---------VAAFIDGKLY 88
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 215706295 142 VFGGCG---DAGRL---NDLWAYDVAAGRWEALPSPgeacKPR---GGPGLAVAGGKVWVVYGFS 197
Cdd:PRK14131  89 VFGGIGktnSEGSPqvfDDVYKYDPKTNSWQKLDTR----SPVglaGHVAVSLHNGKAYITGGVN 149
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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